For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MFPHMGVPDAANTAWVLTSAALVLLMTPALAFFYGGMVRAKSVLNMMMMCFSAVAVVWLLWVIFGYSMAF GTDIGGGLLGDPFQFAGLQHLFEGDYKAPSVPLWGPTNIPALVFVMFQAGFAMVTVALIAGAVADRMRFL PWIAFTALWATLVYFPVAHWIFAVEGTTADKGGWLANLGVLDFAGGTAVEINSGAAGLALAIVLGKRRGW PREAMRPHNLPAVMLGAGLLWFGWFGFNAGSALAADGTAALVIANTLGAGAISMASWLLVEKVRHGKPTS FGAASGVVAGLVAITPSCAAVTPIGALIIGAVTGAVSSLAIELKYRLGYDDSLDVVGVHLVGGVVGTLMI GVVGSAAAPAGVNGLLYGGGLHQFWLQLVGVVTVLVYSVAVTGLIGLGLRHSLGIRSHPQHESDGLDDAE HAESAYELATTRGGGLINPGR
 
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation | 
| M. abscessus ATCC 19977 | MAB_0355 | - | - | 100% (441) | ammonium transporter | 
| M. abscessus ATCC 19977 | MAB_3240c | - | e-146 | 56.79% (449) | ammonium transporter | 
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation | 
| M. bovis AF2122 / 97 | Mb2944c | amt | 1e-142 | 56.98% (451) | ammonium transporter | 
| M. gilvum PYR-GCK | Mflv_1301 | - | 1e-122 | 52.24% (425) | ammonium transporter | 
| M. tuberculosis H37Rv | Rv2920c | amt | 1e-142 | 56.98% (451) | ammonium transporter | 
| M. leprae Br4923 | - | - | - | - | - | 
| M. marinum M | MMAR_1787 | amt | 1e-149 | 58.02% (455) | ammonium-transport integral membrane protein Amt | 
| M. avium 104 | MAV_3775 | amt | 1e-142 | 55.88% (451) | ammonium transporter | 
| M. smegmatis MC2 155 | MSMEG_6259 | amt | 1e-124 | 53.66% (423) | ammonium transporter | 
| M. thermoresistible (build 8) | TH_4321 | - | 1e-119 | 52.36% (445) | PUTATIVE ammonium transporter | 
| M. ulcerans Agy99 | MUL_0037 | amt_1 | 1e-117 | 51.44% (418) | ammonium-transport integral membrane protein, Amt_1 | 
| M. vanbaalenii PYR-1 | Mvan_5508 | - | 1e-123 | 52.72% (423) | ammonium transporter | 
CLUSTAL 2.0.9 multiple sequence alignment
Mb2944c|M.bovis_AF2122/97           ---MDQFPIMGVPDGGDTAWMLVSSALVLLMTPGLAFFYGGMVRSKSVLN
Rv2920c|M.tuberculosis_H37Rv        ---MDQFPIMGVPDGGDTAWMLVSSALVLLMTPGLAFFYGGMVRSKSVLN
MAV_3775|M.avium_104                ----MTYPILGQPNTGDTAWMLASSALVLLMTPGLAFFYGGMVRARSVLN
MMAR_1787|M.marinum_M               ---MSDFPIMGVPDTGDTAWMLASSALVLLMTPGLAFFYGGMVRAKSVLN
MAB_0355|M.abscessus_ATCC_1997      -----MFPHMGVPDAANTAWVLTSAALVLLMTPALAFFYGGMVRAKSVLN
Mflv_1301|M.gilvum_PYR-GCK          ------------MDTGTTAFILCCIIGLTLMIPGLALFYGGMVSVKSSTN
MSMEG_6259|M.smegmatis_MC2_155      ------------MDTGTTAFMLCCIIGLTLMIPGLALFYGGMVSVKSSTN
Mvan_5508|M.vanbaalenii_PYR-1       ------------MDTGTTAFMLCCIIGLTLMIPGLALFYGGMVSVKSSTN
TH_4321|M.thermoresistible__bu      VVLALPDESFAAFDSGDTAWVLISAALVLLMTPGLAFFYGGLSRQKSVLN
MUL_0037|M.ulcerans_Agy99           ----------MDIDPAATAWLLASTALVLLMTPGLAIFYGGMVRTTGVLN
                                                 : . **::* .   : ** *.**:****:    .  *
Mb2944c|M.bovis_AF2122/97           MIMMSISAMGVVTVLWALYGYSIAFGDDVG------NIAGNPSQYWGLKG
Rv2920c|M.tuberculosis_H37Rv        MIMMSISAMGVVTVLWALYGYSIAFGDDVG------NIAGNPSQYWGLKG
MAV_3775|M.avium_104                MLMMSISAMGVVTVLWVLYGYSVAFGDDVG------NFMGKPTSYWGLKG
MMAR_1787|M.marinum_M               MIMMSISAMGVVTVLWVLYGYSVAFGNDMG------GVAGNPTEYLGLKG
MAB_0355|M.abscessus_ATCC_1997      MMMMCFSAVAVVWLLWVIFGYSMAFGTDIGG-----GLLGDPFQFAGLQH
Mflv_1301|M.gilvum_PYR-GCK          MMMMTFGAVAIVGVLWVLFGFSMVFGTSYGG---FVGSFT---EFAGMTD
MSMEG_6259|M.smegmatis_MC2_155      MMMMTFGAVAVVGLLWVLFGFSMVFGTSYGG---FVGSFT---EFAGLTD
Mvan_5508|M.vanbaalenii_PYR-1       MMMMTFGSAALVGVLWVLFGFSMTFGSSYGG---FVGSFT---EFAGMKN
TH_4321|M.thermoresistible__bu      MMMMSFGALGIVSVVYVLWGYSMSFSSGHTGQSDILGVFDNPFSLFGLSP
MUL_0037|M.ulcerans_Agy99           MIMMSFISIPLVTVAWLLAGYSLAFSDGAAPG--LPGGLVGGLTHAGMRG
                                    *:** : :  :* : : : *:*: *. .        .         *:  
Mb2944c|M.bovis_AF2122/97           LIGVNAVAADPSTQTAAVNIPLAG--TLPATVFVAFQLMFAIITVALISG
Rv2920c|M.tuberculosis_H37Rv        LIGVNAVAADPSTQTAAVNIPLAG--TLPATVFVAFQLMFAIITVALISG
MAV_3775|M.avium_104                LIGVNAVAADPSKGTAATDIPLAG--TLPATVFVAFQLMFAIITVALISG
MMAR_1787|M.marinum_M               LIGGNGAPADPATQTAAVDIPLAG--SLPMTVFVAFQLMFAIITVALISG
MAB_0355|M.abscessus_ATCC_1997      LFEG---------DYKAPSVPLWGPTNIPALVFVMFQAGFAMVTVALIAG
Mflv_1301|M.gilvum_PYR-GCK          LLES--------------QTTIAGL---PVSLFALFQALFAGITVALISG
MSMEG_6259|M.smegmatis_MC2_155      LLEP--------------MTTVDGL---PVSLFAVFQALFAAITVALISG
Mvan_5508|M.vanbaalenii_PYR-1       LTEP--------------MTTIDGL---PISLFSLFQALFAAITVALISG
TH_4321|M.thermoresistible__bu      LLETREI-------DGATLSVIGGFGTVPAIVWVGFQLTFAVITVALISG
MUL_0037|M.ulcerans_Agy99           IGPA----------------TVHG--SVPELLFATFQLSFAIITAALVSG
                                    :                    : *    *  ::  **  ** :*.**::*
Mb2944c|M.bovis_AF2122/97           AVADRLKFGAWLLFAGLWATFVYFPVAHWVFAFDGFAAE--HG------G
Rv2920c|M.tuberculosis_H37Rv        AVADRLKFGAWLLFAGLWATFVYFPVAHWVFAFDGFAAE--HG------G
MAV_3775|M.avium_104                AVSDRLKFAAWLVFAGLWATFVYFPVAHWVFAFDGFASE--HG------G
MMAR_1787|M.marinum_M               AVADRLKFGAWLLFAGLWATFVYFPVAHWVFSFDGVTAA--TG------G
MAB_0355|M.abscessus_ATCC_1997      AVADRMRFLPWIAFTALWATLVYFPVAHWIFAVEGTTAD--KG------G
Mflv_1301|M.gilvum_PYR-GCK          AVADRMKFGAWMLFAGLWAVLVYFPVAHWVFAFDGVVTENSVG------G
MSMEG_6259|M.smegmatis_MC2_155      AVADRMKFGAWMVFAAFWAVLVYFPVAHWVFAFDGTVTEDSVG------G
Mvan_5508|M.vanbaalenii_PYR-1       AVADRMKFGAWMGFATLWAVLVYFPVAHWVFAFDGVVTEDSVG------G
TH_4321|M.thermoresistible__bu      ALAERVRFGTWIVFAAVWVTLVYFPLAHMVWG-GGLLSDAQNGFASWLFG
MUL_0037|M.ulcerans_Agy99           AIADRAKFAAWMVFVPVWSIAVYSVVAHWVWAPSGWLAK-----------
                                    *:::* :* .*: *. .*   **  :** ::.  *  :            
Mb2944c|M.bovis_AF2122/97           WIANK----LHAIDFAGGTAVHINAGVAALMLAIVLGKRRGWPATLFRPH
Rv2920c|M.tuberculosis_H37Rv        WIANK----LHAIDFAGGTAVHINAGVAALMLAIVLGKRRGWPATLFRPH
MAV_3775|M.avium_104                WIANK----LHAIDFAGGTAVHINSGVAGLMLAIVLGKRRGWPTTLFRPH
MMAR_1787|M.marinum_M               WIANK----LHAIDFAGGTAVHINAGVAGLVLALVLGKRRGWPTTLFRPH
MAB_0355|M.abscessus_ATCC_1997      WLAN-----LGVLDFAGGTAVEINSGAAGLALAIVLGKRRGWPREAMRPH
Mflv_1301|M.gilvum_PYR-GCK          WIAN----QLAAIDFAGGTAVHINAGAAALAVAIVLGKSAMFGQL-RKPH
MSMEG_6259|M.smegmatis_MC2_155      WIAN----RLGAVDFAGGTAVHINAGAAALALAIVLGKSAMFGR--RKPH
Mvan_5508|M.vanbaalenii_PYR-1       WIAN----KLGAIDFAGGTAVHINAGAAALAVAIVLGKSKNWGQL-RKPH
TH_4321|M.thermoresistible__bu      FNEDEGAANVAPIDFAGGTVVHINAGMAALMLALVVGRRLGFGRTAYRPH
MUL_0037|M.ulcerans_Agy99           ---------MGVLDYAGGLVVEIVSGSSARALAPVLGPRIGFKVDPMRPH
                                             :  :*:*** .*.* :* :.  :* *:*    :     :**
Mb2944c|M.bovis_AF2122/97           NLPFVMLGAALLWFGWYGFNAGSATTANGVAGATFVTTTIATAAAMLGWL
Rv2920c|M.tuberculosis_H37Rv        NLPFVMLGAALLWFGWYGFNAGSATTANGVAGATFVTTTIATAAAMLGWL
MAV_3775|M.avium_104                NLPFVMLGAGLLWFGWYGFNAGSATSSNGAAGSTFMTTTIATATAMLAWM
MMAR_1787|M.marinum_M               NLPFVMLGAGLLWFGWYGFNAGSATSSNGTAATTFVTTTVATAAAMLAWL
MAB_0355|M.abscessus_ATCC_1997      NLPAVMLGAGLLWFGWFGFNAGSALAADGTAALVIANTLGAGAISMASWL
Mflv_1301|M.gilvum_PYR-GCK          NVPLTLLGAGMLWAGWYAFNGGSALAAGNSAAIVMVTTFVATCAATLAWL
MSMEG_6259|M.smegmatis_MC2_155      NVPLTLLGAGMLWAGWYAFNGGSALSAGNSAAIVMVTTFVATCAAVLAWI
Mvan_5508|M.vanbaalenii_PYR-1       NVPLTLLGAGLLWAGWYAFNGGSALAAGNSAAIVMVTTFVATCAATLAWI
TH_4321|M.thermoresistible__bu      NIPWVMLGAALLWFGWFGFNVGSEGAADAVAGLVWVNTTAATAAAMLGWL
MUL_0037|M.ulcerans_Agy99           NLPFVLLGVGLLWFGWFGFNAGSALAANGLASAIFLNTLVAGCLGMLGWL
                                    *:* .:**..:** **:.** **  ::.  *.    .*  * . .  .*:
Mb2944c|M.bovis_AF2122/97           LTERVRDGKATTLGAASGIVAGLVAITPSCSSVNVLGALAVGVSAGVLCA
Rv2920c|M.tuberculosis_H37Rv        LTERVRDGKATTLGAASGIVAGLVAITPSCSSVNVLGALAVGVSAGVLCA
MAV_3775|M.avium_104                LTERIRDGKATTLGAASGIVAGLVAITPSCSSVNVLGALVVGLVAGVVCA
MMAR_1787|M.marinum_M               LTERIRDGKATTLGAASGIVAGLVAITPSCSSVNVLGALVVGAVAGVLCA
MAB_0355|M.abscessus_ATCC_1997      LVEKVRHGKPTSFGAASGVVAGLVAITPSCAAVTPIGALIIGAVTGAVSS
Mflv_1301|M.gilvum_PYR-GCK          TVEKIKDGHVTGVGAASGAITGLVAITPACGAVTPVGAIFVGAIAGAVCV
MSMEG_6259|M.smegmatis_MC2_155      AVEKVKTGHVTGVGAASGAITGLVAITPACGAVTPIGAMFVGGIAGAVCV
Mvan_5508|M.vanbaalenii_PYR-1       AVEKIKDGHVTGVGAASGAITGLVAITPACGAVTPVGAIILGAIAGAICV
TH_4321|M.thermoresistible__bu      IVERIRDGRPTSVGAASGIVAGLVAITPACGALSPVGSLFLGVIAGALSA
MUL_0037|M.ulcerans_Agy99           AVEQIRDGKPTTFGAASGVVAGLVAITPSCGTVNPLGAALIGLAAGIVCA
                                     .*::: *: * .***** ::*******:*.::. :*:  :*  :* :. 
Mb2944c|M.bovis_AF2122/97           LAVGLKFKLGFDDSLDVVGVHLVGGLVGTLLVGLLAAPEAPAINGVAGVS
Rv2920c|M.tuberculosis_H37Rv        LAVGLKFKLGFDDSLDVVGVHLVGGLVGTLLVGLLAAPEAPAINGVAGVS
MAV_3775|M.avium_104                LAVGLKFKLGFDDSLDVVGVHLVGGLAGTLLVGLLAAPESPAISGVTGVS
MMAR_1787|M.marinum_M               LAVGLKFRLGFDDSLDVVGVHLVGGLAGTLLVGLMAAPESPAINGVEGVS
MAB_0355|M.abscessus_ATCC_1997      LAIELKYRLGYDDSLDVVGVHLVGGVVGTLMIGVVGSAAAPAG------V
Mflv_1301|M.gilvum_PYR-GCK          YAVGLKSKFGYDDSLDVVGVHLVGGLVGTLLIGFFASESMTNA------T
MSMEG_6259|M.smegmatis_MC2_155      YAVGLKDTFGYDDSLDVVGVHLVGGLIGTLLIGFFASEGMPNG------V
Mvan_5508|M.vanbaalenii_PYR-1       YAVGLKERFGYDDSLDVVGVHLVGGVVGTLLIGFLASETMPNA------T
TH_4321|M.thermoresistible__bu      LAVGLKYRFGYDDSLDVVGVHLVAGLWGTIGIGFFATET-----------
MUL_0037|M.ulcerans_Agy99           FAITVKFKLNYDDSLDVVGVHFIGGVVGVLLIGLLATAVMTDG------A
                                     *: :*  :.:**********::.*: *.: :*...:             
Mb2944c|M.bovis_AF2122/97           KGLFYGGGFAQLERQALGACSVLVYSGIITLILALILKFTIGLRLDAEQE
Rv2920c|M.tuberculosis_H37Rv        KGLFYGGGFAQLERQALGACSVLVYSGIITLILALILKFTIGLRLDAEQE
MAV_3775|M.avium_104                KGLFYGGGWAQLERQAVGAFSVLIYSGVVTLILALILKYTMGLRLNPEAE
MMAR_1787|M.marinum_M               KGLFYGGGFDQLVRQAVGASSVLIYSGVVTFILALILKYTIGLRLGPEQE
MAB_0355|M.abscessus_ATCC_1997      NGLLYGGGLHQFWLQLVGVVTVLVYSVAVTGLIGLGLRHSLGIRSHPQHE
Mflv_1301|M.gilvum_PYR-GCK          NGLLYGGGIEQLWKQAVAAFAVMAYSFAVAFVIAFALKKTMGIRISPEDE
MSMEG_6259|M.smegmatis_MC2_155      NGLFYGGGIDQLWKQAVAAGAVMIYSFVLAYVIAFAIKKTMGIRISPDEE
Mvan_5508|M.vanbaalenii_PYR-1       NGLFYGGGIDQLWKQAIAAGAVMAYSFAVAFAIAFILKKTVGIRISPDDE
TH_4321|M.thermoresistible__bu      -GLLYGGGIQQLIVQIVIAVVAMAFTAVMTLVIATVLKP-LGWRVSEEDE
MUL_0037|M.ulcerans_Agy99           RGLFYGGGLGQLGKQALAMVVVGLYAFTVSYLLAALIERLMGFRVSREEE
                                     **:****  *:  * :    .  ::  ::  :.  :.  :* *   : *
Mb2944c|M.bovis_AF2122/97           STGIDEAEHAESGYDFAVASGSVLPPRVTVEDSRNGIQER-IGQKVEAEP
Rv2920c|M.tuberculosis_H37Rv        STGIDEAEHAESGYDFAVASGSVLPPRVTVEDSRNGIQER-IGQKVEAEP
MAV_3775|M.avium_104                ASGIDEAEHAESGYDFAVATGSVLPPRVAVADTRNGLEEQRVGDKVEAEQ
MMAR_1787|M.marinum_M               SAGIDEAEHAENGYDFAVASGSVLPRPGIVADSRNGLEER-VGEKVEAEP
MAB_0355|M.abscessus_ATCC_1997      SDGLDDAEHAESAYELATTRGGGLINPGR---------------------
Mflv_1301|M.gilvum_PYR-GCK          EMGIDAKFHRDSAYDMQTA-------------------------------
MSMEG_6259|M.smegmatis_MC2_155      EKGIDAKFHRDAAYELEFA-------------------------------
Mvan_5508|M.vanbaalenii_PYR-1       EKGIDAAFHREASYEIQPA-------------------------------
TH_4321|M.thermoresistible__bu      EAGIDAAEHAETAYELV---------------------------------
MUL_0037|M.ulcerans_Agy99           VSGVDFSQHAETAYTEGVYGHQQLHRPFSGGDAIRPRPNIEDA-------
                                      *:*   * : .*                                    
Mb2944c|M.bovis_AF2122/97           K
Rv2920c|M.tuberculosis_H37Rv        K
MAV_3775|M.avium_104                S
MMAR_1787|M.marinum_M               K
MAB_0355|M.abscessus_ATCC_1997      -
Mflv_1301|M.gilvum_PYR-GCK          -
MSMEG_6259|M.smegmatis_MC2_155      -
Mvan_5508|M.vanbaalenii_PYR-1       -
TH_4321|M.thermoresistible__bu      -
MUL_0037|M.ulcerans_Agy99           -