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SSSAGLTSQRPGSKENDMANELIELSSDSRTFKRAWRDLSEGFEHRQLWLQLGWQDIKQRYRRSVLGPFW ITIATGSTALAMGILYSQLFKLPLAEHLPYVTIGLIVWNLFNAAILEGSDVFVANEGLIKQLPTPLSVHV YRLVWRQLLLFAHNIIIFLIVVAVYTPHWHFTDLSFIPALVLITLNCLWVSLVFGVLATRYRDISPLLGS LVQLLFFMTPIIWNENMLNQRVGKLATVVQLNPFVHFLAIIRDPLLGLDQQLHHWIIALSITVVGWIVAI VVMRQYRARVPYWV*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_0201c | - | - | 100% (295) | O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3812 | rfbD | 1e-110 | 67.66% (269) | O-antigen/lipopolysaccharide transport integral membrane |
| M. gilvum PYR-GCK | Mflv_1184 | - | 1e-116 | 71.90% (274) | ABC-2 type transporter |
| M. tuberculosis H37Rv | Rv3783 | rfbD | 1e-110 | 67.66% (269) | O-antigen/lipopolysaccharide transport integral membrane |
| M. leprae Br4923 | MLBr_00112 | - | 1e-107 | 65.20% (273) | putative ABC transporter component |
| M. marinum M | MMAR_5338 | rfbD | 1e-111 | 67.03% (273) | O-antigen/lipopolysaccharide transport integral membrane |
| M. avium 104 | MAV_0236 | - | 1e-112 | 67.77% (273) | O-antigen export system, permease protein |
| M. smegmatis MC2 155 | MSMEG_6369 | - | 1e-113 | 68.75% (272) | O-antigen export system, permease protein |
| M. thermoresistible (build 8) | TH_1670 | - | 1e-116 | 70.07% (274) | PROBABLE O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT INTEGRAL |
| M. ulcerans Agy99 | MUL_0090 | rfbD | 1e-112 | 63.46% (301) | O-antigen/lipopolysaccharide transport integral membrane |
| M. vanbaalenii PYR-1 | Mvan_5620 | - | 1e-116 | 71.53% (274) | ABC-2 type transporter |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_6369|M.smegmatis_MC2_155 ------------------------------------------MTFTDAAA
TH_1670|M.thermoresistible__bu ------------------------------------------LTITDATA
Mflv_1184|M.gilvum_PYR-GCK ------------------------------------------MTIMDAAA
Mvan_5620|M.vanbaalenii_PYR-1 ------------------------------------------MTIMDAAA
Mb3812|M.bovis_AF2122/97 ------------------------------------------MTFMDAQA
Rv3783|M.tuberculosis_H37Rv ------------------------------------------MTFMDAQA
MMAR_5338|M.marinum_M ------------------------------------------MTFIDAAA
MUL_0090|M.ulcerans_Agy99 MAEVRLVLPGDPPRPQGSAGVDSVAPLGASREVRRARSWRIQMTFIDAAA
MLBr_00112|M.leprae_Br4923 ------------------------------------------MTFVDAAA
MAV_0236|M.avium_104 ------------------------------------------MTFLDAAA
MAB_0201c|M.abscessus_ATCC_199 ----------------------MSSSAGLTSQRPGSKENDMANELIELSS
: : :
MSMEG_6369|M.smegmatis_MC2_155 ----QSKTMARARRDLVEGFAKRELWAHLGWQDIKQRYRRSVLGPFWITI
TH_1670|M.thermoresistible__bu ----QSRTFRRAWRDLTEGFGKYELWLHLGWQDIKQRYRRSVLGPFWITI
Mflv_1184|M.gilvum_PYR-GCK ----RSRTFGRAWGDLVAGFGKRELWLHLGWQDIKQRYRRSVLGPFWITI
Mvan_5620|M.vanbaalenii_PYR-1 ----QSRTFARAWGDLVAGFGKRELWLHLGWQDIKQRYRRSVLGPFWITI
Mb3812|M.bovis_AF2122/97 SFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITI
Rv3783|M.tuberculosis_H37Rv SFQTQSRTLARVRGDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITI
MMAR_5338|M.marinum_M ----QSRTFARARGDLLEGFRRHELWLHLGWQDIKQRYRRSVLGPFWITI
MUL_0090|M.ulcerans_Agy99 ----QSRTFARARGDLLEGFRRHELWLHLGWQDIKQRYRRSVLGPFWITI
MLBr_00112|M.leprae_Br4923 ----QSRTLARARSDLIEGLHRHELWLHLGWQDIKQRYRRSVLGPFWITI
MAV_0236|M.avium_104 ----QSRTLRRARSDLVDGFRRHELWLHLGWQDIKQRYRRSVLGPFWITI
MAB_0201c|M.abscessus_ATCC_199 ----DSRTFKRAWRDLSEGFEHRQLWLQLGWQDIKQRYRRSVLGPFWITI
*:*: *. ** *: : :** :**********************
MSMEG_6369|M.smegmatis_MC2_155 ATGATAVAMGVLYSKLFKLELSEHLPYVTLGLIIWNLINASILEGAEVFI
TH_1670|M.thermoresistible__bu ATGTTAVAMGGLYSALFKLELSEHLPYVTLGLIIWNLINASILEGAEVFI
Mflv_1184|M.gilvum_PYR-GCK ATGTTAVAMGGLYSMLFKLELSEHLPYVTLGLIVWNLINASILEGADVFV
Mvan_5620|M.vanbaalenii_PYR-1 ATGTTAVAMGGLYSMLFKLELSEHLPYVTLGLIVWNLINASILEGAEVFI
Mb3812|M.bovis_AF2122/97 ATGTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFV
Rv3783|M.tuberculosis_H37Rv ATGTTAVAMGGLYSKLFRLELSEHLPYVTLGLIVWNLINAAILDGAEVFV
MMAR_5338|M.marinum_M ATGTTALAMGGLYSKLFHLELSAHLPYVTLGLIIWNLINAAILDGADVFV
MUL_0090|M.ulcerans_Agy99 ATGTTALAMGGLYSKLFHLELSAHLPYVTLGLIIWNLINAAILDGADVFV
MLBr_00112|M.leprae_Br4923 ATGTTSIAMGGLYSKLFHLDLSVHLPYVTLGLIIWNLINAAILEGAEVFV
MAV_0236|M.avium_104 ATGTTAVAMGGLYSKLFHLELSVHLPYVTLGLIIWNLINAAILEGADVFV
MAB_0201c|M.abscessus_ATCC_199 ATGSTALAMGILYSQLFKLPLAEHLPYVTIGLIVWNLFNAAILEGSDVFV
***:*::*** *** **:* *: ******:***:***:**:**:*::**:
MSMEG_6369|M.smegmatis_MC2_155 ANEGLIKQLPTPLSVHVYRLVWRQIILFAHNIIIFVIIAIIYPKPWTWTD
TH_1670|M.thermoresistible__bu ANEGLIKQLPTPLSVHVYRLVWRQMILFAHNIIIFVIIAIIFPKPWSWTV
Mflv_1184|M.gilvum_PYR-GCK ANEGLIKQLPTPLSVHVYRLVWRQMLLFAHNIIIFVIIAIIYPKPWSWAD
Mvan_5620|M.vanbaalenii_PYR-1 ANEGLIKQLPTPLSVHVYRLVWRQMILFAHNIIIFVIIAIVYPKPWNWAD
Mb3812|M.bovis_AF2122/97 ANEGLIKQLPAPLSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWAD
Rv3783|M.tuberculosis_H37Rv ANEGLIKQLPAPLSVHVYRLVWRQMIFFAHNIVIYFVIAIIFPKPWSWAD
MMAR_5338|M.marinum_M SNEGLIKQLPAPLSVHVYRLVWRQVIFFAHNIVIYFVVAIIFPKPWSWAD
MUL_0090|M.ulcerans_Agy99 SNEGLIKQLPAPLSVHIYRLVWRQMIFFAHNIVIYFVVAIIFPKPWSWAD
MLBr_00112|M.leprae_Br4923 ANEGLIKQLPTPLSVHVYRLVWRQTILFTHNIIIYLVVGILFPKPWSWAD
MAV_0236|M.avium_104 ANEGLIKQLPTPLSVHVYRLVWRQMILFAHNIVIYVVIAMIYPKPWSWAD
MAB_0201c|M.abscessus_ATCC_199 ANEGLIKQLPTPLSVHVYRLVWRQLLLFAHNIIIFLIVVAVYTPHWHFTD
:*********:*****:******* ::*:***:*:.:: ::. * ::
MSMEG_6369|M.smegmatis_MC2_155 LAVIPALGLIMLNMVWVALCFGILATRYRDIGPLLASVVQLLFFMTPIIW
TH_1670|M.thermoresistible__bu LTVIPALGLIVLNCVWVSLCFGILATRYRDIGPLLASIVQLLFFMTPIIW
Mflv_1184|M.gilvum_PYR-GCK LSVIPALLLLALNCVWVALCFGILATRYRDISPLLGSLVQLLFFMTPIIW
Mvan_5620|M.vanbaalenii_PYR-1 LAVIPALGLIAANCVWVALCFGILATRYRDIGPLLGSLVQLLFFMTPIIW
Mb3812|M.bovis_AF2122/97 LSFLPALALIFLNCVWVSLCFGILATRYRDIGPLLFSVVQLLFFMTPIIW
Rv3783|M.tuberculosis_H37Rv LSFLPALALIFLNCVWVSLCFGILATRYRDIGPLLFSVVQLLFFMTPIIW
MMAR_5338|M.marinum_M LSVVPALGLIVLNCVWVSICFGILATRYRDIAPLLNSLVQLLFFMTPIIW
MUL_0090|M.ulcerans_Agy99 LSVVPALGLIVLNCVWVSLCFGIVATRYRDIAPLLNSLVQLLFFMTPIIW
MLBr_00112|M.leprae_Br4923 LSVFPALALVILNSVWVSLCFGILATRYRDIGPLLFSVVQLLFFITPIIW
MAV_0236|M.avium_104 LSVIPALALIVLNCIWVSLCFGILATRYRDIGPLLFSVVQLLFFMTPIIW
MAB_0201c|M.abscessus_ATCC_199 LSFIPALVLITLNCLWVSLVFGVLATRYRDISPLLGSLVQLLFFMTPIIW
*:..*** *: * :**:: **::*******.*** *:******:*****
MSMEG_6369|M.smegmatis_MC2_155 NESTLQQQGAGSWAKIVEINPLLHYLDIVRAPLLGADQELRHWLVVLAFT
TH_1670|M.thermoresistible__bu NEATLDRQGAGTWAKLVELNPLLHYLDIVRAPLLGADQELHHWVVVISLT
Mflv_1184|M.gilvum_PYR-GCK NESTLQAQGAGGWAKIVELNPLLHYLDIVRAPLLGAEQELRHWVVVLVLT
Mvan_5620|M.vanbaalenii_PYR-1 NESTLQAQGAGGWAKVVELNPLLHYLDIVRAPLLGADQELRHWVVVLVLT
Mb3812|M.bovis_AF2122/97 NDETLRRQGAGRWSSIVELNPLLHYLDIVRAPLLGAHQELRHWLVVLVLT
Rv3783|M.tuberculosis_H37Rv NDETLRRQGAGRWSSIVELNPLLHYLDIVRAPLLGAHQELRHWLVVLVLT
MMAR_5338|M.marinum_M NDETLHRQGAGRWSRIVELNPLLHYLDIVRAPLLGAHQELRHWLVVIALT
MUL_0090|M.ulcerans_Agy99 NDETLHRQGAGRWARIVELNPLLHYLDIVRAPLLGAHQELRHWLVVIALT
MLBr_00112|M.leprae_Br4923 NDDALRQQGEGRWSSIVELNPLLHYLDIVRAPLLGAHQELRHWAVVVTLT
MAV_0236|M.avium_104 NDDTLRQQGAGRWSSIVELNPLLHYLDIVRAPLLGSHQELRHWAVVLVLT
MAB_0201c|M.abscessus_ATCC_199 NENMLN-QRVGKLATVVQLNPFVHFLAIIRDPLLGLDQQLHHWIIALSIT
*: * * * : :*::**::*:* *:* **** .*:*:** :.: :*
MSMEG_6369|M.smegmatis_MC2_155 VIGWTFAAFAMRQYRGRVPYWV
TH_1670|M.thermoresistible__bu VVGWGLAAIAMRKYRSRVPYWV
Mflv_1184|M.gilvum_PYR-GCK VVGWGFAALAMRQYRARVAYWV
Mvan_5620|M.vanbaalenii_PYR-1 VVGWTFAALAMRQYRARVPYWV
Mb3812|M.bovis_AF2122/97 VVGWMLAAFAMRQYRARVPYWV
Rv3783|M.tuberculosis_H37Rv VVGWMLAAFAMRQYRARVPYWV
MMAR_5338|M.marinum_M IVGWVLAAFAMRQYRARVPYWV
MUL_0090|M.ulcerans_Agy99 IVGWVLAAFAMRQYRARVPYWV
MLBr_00112|M.leprae_Br4923 AAGWLLAAFAMRQYRARVPYWV
MAV_0236|M.avium_104 AVGWLLAAFAMRQYRARVPYWV
MAB_0201c|M.abscessus_ATCC_199 VVGWIVAIVVMRQYRARVPYWV
** .* ..**:**.**.***