Software Tools for Statistical Analysis of Transposon Mutagenesis (TnSeq) Data from Ioerger lab at Texas A&M

• Gumbel model (gap analysis)
• Tn-HMM (Hidden Markov Model)
• Genetic Interactions
• TRANSIT - compilation of all our algorithms in Python, with GUI interface; includes TPP
• mh_ess_1.21 - stand-alone code for essentiality analysis using Metropolis-Hasting sampling
• Example data