For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_4402 | - | - | 100% (185) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3338 | - | 8e-49 | 54.40% (182) | hypothetical protein Mflv_3338 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2837 | - | 5e-42 | 48.33% (180) | hypothetical protein MMAR_2837 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_3592 | - | 9e-42 | 48.47% (196) | hypothetical protein MSMEG_3592 |
M. ulcerans Agy99 | MUL_2917 | - | 4e-41 | 48.02% (177) | hypothetical protein MUL_2917 |
M. vanbaalenii PYR-1 | Mvan_3066 | - | 3e-51 | 56.74% (178) | hypothetical protein Mvan_3066 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3338|M.gilvum_PYR-GCK MVQWAMRSP-IR-AGLVAAALLSTGCSGPTVVTTEDAAQTTATS-AAPTP Mvan_3066|M.vanbaalenii_PYR-1 MARLDTDMPAIKYVCLMLLALGSVSCSGPTVVNTDESTVPPRPS-ASAAP TH_4402|M.thermoresistible__bu ---------------------MLTGCAGPAVVTTEDAEAPPAAAPPAPAT MSMEG_3592|M.smegmatis_MC2_155 -MRICVAARALLLAGALAAP--VAGCSSGAVVNTGETPPRTPAPTTTAVP MMAR_2837|M.marinum_M ---MRISGTGVGRWAAILLLASTAGCGDGPGVTTGESSPAPTGTTISTST MUL_2917|M.ulcerans_Agy99 ----MGSNSVVGEHGGVWRWA--------PGVTTGESSPAPTGTTISTST . *.* :: . . :. . Mflv_3338|M.gilvum_PYR-GCK TTGRPSNVHLANAFDFAADTGG-QTGYYFSSPSGRWACAILPRVRAGCQ- Mvan_3066|M.vanbaalenii_PYR-1 TTTRPSNAHLANAYHFAAEVDG-QTGYYFTSPSGRWECAIVPRVRAGCQ- TH_4402|M.thermoresistible__bu STARPSNELLVDASQYAVRVDGRVVGYFFRSPSGRWNCAIVPREQAGCQ- MSMEG_3592|M.smegmatis_MC2_155 VYG-TTN--LVNAADYAISVDG-RTGYYFTTPSGRWACAILPRDRAGCES MMAR_2837|M.marinum_M LPTPSNNLQLANAADYFLDTGSARAGYYFESPSGRWRCAILPHVQAGCQS MUL_2917|M.ulcerans_Agy99 LPTPSNNLQLANAADYFLDTGSARAGYYFESPSGRWRCAILPHVQAGCQA ..* *.:* .: ... .**:* :***** ***:*: :***: Mflv_3338|M.gilvum_PYR-GCK NAQSTSSIGIDGAPDEISGPGGESLAPNAITIERSGGPRFVRMTPPGFAL Mvan_3066|M.vanbaalenii_PYR-1 DTRNAASIGITGAPDEVPGADGEPSAPNAIVVDRDADPQFVALATPAFGL TH_4402|M.thermoresistible__bu AAG-GSTLPITGAPTRVPDADGDPARPTAIVVSRSGAAHFAAPAEPVFSP MSMEG_3592|M.smegmatis_MC2_155 SSGLSARLPITGAPDVT--VDGEATAPNAIAVDRDHDAGFLALEEPLFSV MMAR_2837|M.marinum_M ASG--SAIGIHGAPDTVTNSDGTTDAPNAIVVEETGEAHFAVLSKAQSFA MUL_2917|M.ulcerans_Agy99 ASG--SAIGIHGAPDTVTNSDGTTDAPNAIVVGETGEAHFAVLSKAQSFA : : : * *** .* . *.**.: . . * . Mflv_3338|M.gilvum_PYR-GCK TP------------GPAAELPFNRILAVGGFRCNVQQASGISCLSEAGGG Mvan_3066|M.vanbaalenii_PYR-1 AP------------DPAPELPFNRILAVAGFRCNVQESVGISCLSEASGK TH_4402|M.thermoresistible__bu GT------------GTARELAFDRILAAAGFRCNVQEASGISCLSEASGE MSMEG_3592|M.smegmatis_MC2_155 DQDSVDSTTDSEADGEVETLPFGKVLAVAGFRCNVQEETGVSCVRELTGK MMAR_2837|M.marinum_M AV------------EPAKVLPFNEVLDAAGFRCNFQESVGVSCASETSAQ MUL_2917|M.ulcerans_Agy99 TV------------EPAKVLPFNEVLDAAGFRCNFQESVGVSCASGTSAQ . *.*..:* ..*****.*: *:** . Mflv_3338|M.gilvum_PYR-GCK GFTFSAEGFTTAYTDVPPGAP Mvan_3066|M.vanbaalenii_PYR-1 GFTFSADGFAAQYTDVPADAP TH_4402|M.thermoresistible__bu GFTFSADGYTLSYTDVAPA-- MSMEG_3592|M.smegmatis_MC2_155 GFTFSGDGYTLTYTDIP---- MMAR_2837|M.marinum_M GFTFSSDGYTLQYTDIRR--- MUL_2917|M.ulcerans_Agy99 GFTFSSDGYTLQYTDIRP--- *****.:*:: ***: