For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4333 | - | - | 100% (98) | - |
| M. thermoresistible (build 8) | TH_2441 | - | 1e-15 | 43.81% (105) | PUTATIVE transposase IS3/IS911 family protein |
| M. thermoresistible (build 8) | TH_1992 | - | 2e-13 | 39.58% (96) | POSSIBLE TRANSPOSASE FOR INSERTION ELEMENT IS6110 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2839c | - | 2e-13 | 42.00% (100) | transposase |
| M. gilvum PYR-GCK | Mflv_4643 | - | 8e-19 | 44.68% (94) | transposase IS3/IS911 family protein |
| M. tuberculosis H37Rv | Rv3474 | - | 2e-13 | 42.00% (100) | transposase IS6110 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2087 | - | 3e-06 | 30.00% (90) | transposase |
| M. marinum M | MMAR_2547 | - | 5e-11 | 38.38% (99) | transposase, ISMyma03_aa1 |
| M. avium 104 | MAV_5035 | - | 5e-07 | 32.29% (96) | ISAfe7, transposase OrfA |
| M. smegmatis MC2 155 | MSMEG_5096 | - | 2e-09 | 38.83% (103) | ISMsm1, transposase orfA |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2521 | - | 2e-19 | 50.00% (94) | transposase IS3/IS911 family protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_4333|M.thermoresistible__bu MS--------------GKRKKYTPEFREQAARLVIETG--------RPIA
Mvan_2521|M.vanbaalenii_PYR-1 MS--------------EKRKKYDREFREGAVRIVEETG--------KPIA
Mflv_4643|M.gilvum_PYR-GCK MA--------------KKYQKFSPEFREETARLVVDGQ--------KSIA
Mb2839c|M.bovis_AF2122/97 MS-------------GGSSRRYPPELRERAVRMVAEIRGQHD-SEWAAIS
Rv3474|M.tuberculosis_H37Rv MS-------------GGSSRRYPPELRERAVRMVAEIRGQHD-SEWAAIS
MMAR_2547|M.marinum_M MA-------------RAS--KYPEELRERAVRMVAEIAPQYG-SQWAAIC
MAV_5035|M.avium_104 MPKEQSP-------GKPTTRRYSAEEKAAAVRMVRTLRAELG-TEQGTVQ
MSMEG_5096|M.smegmatis_MC2_155 MA---------------APRKFDQETRERAVRMYEDRIAEFGGSKREARR
MAB_2087|M.abscessus_ATCC_1997 MTSELACPKRAGWKDVSVPRPYPREFRDDVVRVARNRD------DGVTIE
*. : * : ..*: .
TH_4333|M.thermoresistible__bu HVAAEIGVG-EQLLGRWVR---QAREHGGDNGAVLDADERAELERLRKEN
Mvan_2521|M.vanbaalenii_PYR-1 QIARDLGVN-EGTLGNWVA---RAREAREGRGE-LTRDDMEELKRLRGEV
Mflv_4643|M.gilvum_PYR-GCK EVAREHGLS-DTTVGNWVR---KYRETHATDEPPLELSERARLRELEREN
Mb2839c|M.bovis_AF2122/97 EVARLLGVGCAETVRKWVR----QAQVDAGARPGTTTEESAELKRLRRDN
Rv3474|M.tuberculosis_H37Rv EVARLLGVGCAETVRKWVR----QAQVDAGARPGTTTEESAELKRLRRDN
MMAR_2547|M.marinum_M AVAGKLGVGTPETVRTWVR----RAEVDAGQRPGVSSEQSEELRRLKREN
MAV_5035|M.avium_104 RVARQLGYG-VESVRTWVR----QADIDEGLAPGVTTAESKRVQELEQEN
MSMEG_5096|M.smegmatis_MC2_155 HVGELLGIN-EATLRNWVENRHGSGRPAAGAVMSSAGDKDAELAALRKEN
MAB_2087|M.abscessus_ATCC_1997 QIATDFGVH-PMTLTKWMR----QADVDEGAKPGKSTNDSADLRELRRRN
:. * : *: . : *.
TH_4333|M.thermoresistible__bu AELRLDRQFLKKAAAFFA-SEQNQ------
Mvan_2521|M.vanbaalenii_PYR-1 SELRMERDVLKRSVVLWV-KEATK------
Mflv_4643|M.gilvum_PYR-GCK REMAMELAFLKKAAAYFA-KEPR-------
Mb2839c|M.bovis_AF2122/97 AELRRANAILKTASAFFA-AELDRPAR---
Rv3474|M.tuberculosis_H37Rv AELRRANAILKTASAFFA-AELDRPAR---
MMAR_2547|M.marinum_M AELRRANEILKAAAIFFG-AELDRPARR--
MAV_5035|M.avium_104 RELKRANEILKRAASFFG-AELDRQHKK--
MSMEG_5096|M.smegmatis_MC2_155 AELRRANEILKTASAFFAAAEVDRRLR---
MAB_2087|M.abscessus_ATCC_1997 RLLEQENEVLRRAAAYLSQANLPGKGSTRS
: .*: : :