For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4022 | - | - | 100% (180) | putative conserved hypothetical membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_2005 | - | 9e-18 | 34.64% (179) | hypothetical protein Mflv_2005 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_4437 | - | 5e-42 | 52.15% (186) | hypothetical protein MMAR_4437 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5362 | - | 7e-17 | 36.36% (132) | hypothetical protein MSMEG_5362 |
| M. ulcerans Agy99 | MUL_4616 | - | 2e-41 | 51.61% (186) | hypothetical protein MUL_4616 |
| M. vanbaalenii PYR-1 | Mvan_4735 | - | 3e-18 | 39.85% (133) | hypothetical protein Mvan_4735 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5362|M.smegmatis_MC2_155 ---MTDVANVTADSAPEANEDTSSPVESGTTSVGEETTAPVT-APS-GRR
Mvan_4735|M.vanbaalenii_PYR-1 MAVDANVTNVNPTADAPAEQPPVARTMADHDAVQQPVQPPVAPAPSTKQR
Mflv_2005|M.gilvum_PYR-GCK MTADVDDADVKDDVTTESSPPAASPVEPDTVSP---------------AR
MMAR_4437|M.marinum_M MAQPSETLPPADEARPESVPAADAPAAT----------------------
MUL_4616|M.ulcerans_Agy99 MAQPSETPPPADEARPESVPAADAPAAT----------------------
TH_4022|M.thermoresistible__bu --------------------------------------------------
MSMEG_5362|M.smegmatis_MC2_155 TWSMPKSPISREQADQAGRAALAAGSAVGRFLAEVARYIARAVAQCGRAV
Mvan_4735|M.vanbaalenii_PYR-1 VWTMPKSPVTRKHADEVGRIALTVIRSIAGFVAGAARYGAGVAGQMWRGI
Mflv_2005|M.gilvum_PYR-GCK TRSRPKSPLTRQHAEQAGRYAVAAATGVARAITGLARFGAHAVGQVGAVM
MMAR_4437|M.marinum_M -------PATSRPKQQWGHTLAQQAATVSAKLSPVVR-------RAGDRV
MUL_4616|M.ulcerans_Agy99 -------PATSRPKQQWGHTLAQQAATVSAKLSPVVR-------RAGDRV
TH_4022|M.thermoresistible__bu ------------------------VSTVAAKLGALAR-------QACDRV
:. : .* : :
MSMEG_5362|M.smegmatis_MC2_155 EAVPVALRLFVFAAVVMLLGIVGAIASNDALGLLCTVVVIPLCAATLGVL
Mvan_4735|M.vanbaalenii_PYR-1 EAVPPAAKLFFVSALLMLLGLVGGLTLDSSLGLMCTVVVVPVCAGILGAL
Mflv_2005|M.gilvum_PYR-GCK REIPPTLRMLFVFGVLTLLAMAGSLTLAGTPGLVCAVVLVPICSITLGAL
MMAR_4437|M.marinum_M AAASPTTLLLALLSVLLASSIVAALTFKGSLGVASIVVFIPMLSAAIGAT
MUL_4616|M.ulcerans_Agy99 AAASPTTLLLTLLSVLLASSIVAALTFKGSLGVASIVVFIPMLSAAIGAT
TH_4022|M.thermoresistible__bu AAASPMTILVLLLGVLTALSMVAALSSESSLGVTSTVLFVPALSAALGAL
. :. . .:: .:...:: .: *: . *:.:* : :*.
MSMEG_5362|M.smegmatis_MC2_155 GQRWYSGLGDQPAR--PSSEEIAAQPDLQRSVEYVDKKLAVTLTAMGTER
Mvan_4735|M.vanbaalenii_PYR-1 GYRWYSGLGVETARRTDSHATEPTQSDLQRSVQYVDRKLTLALTSFGTEH
Mflv_2005|M.gilvum_PYR-GCK GHRWFAGAGAEPES--GSRVSRAETAELERSMVYADKKLSMALNSLGSDR
MMAR_4437|M.marinum_M TMRFLADRRKSQAQRENAREETRALHQIEYTLDYVDAKLTTALTQFGTDR
MUL_4616|M.ulcerans_Agy99 TMRFLADRRKSQAQRENAREETRALHQIEYTLDYVDAELTTALTQFGTDR
TH_4022|M.thermoresistible__bu AMRHVLIRADGPTAREDARDDTTEMRQLQRTLDYVDAKLDAALTQFGTDR
* : ::: :: *.* :* :*. :*:::
MSMEG_5362|M.smegmatis_MC2_155 HQQAVISLFQAKTALELTLGTEQDSATFLEMPMP------ADDHPLRPRI
Mvan_4735|M.vanbaalenii_PYR-1 HQQAVIALFQAKTAVELTLGTEQDLASYGDIALR------ADDYGLRPRI
Mflv_2005|M.gilvum_PYR-GCK HQHAVIALFQAKTAVELALGTENDDD--RPAPIP------VDAYRVRPRI
MMAR_4437|M.marinum_M HNEAVIGMFQAKAATELYLGQAPRSERRSSPEPAPEHIDLVSQYGLDELL
MUL_4616|M.ulcerans_Agy99 HNEAVIGMFQAKAATELYLGQAPRSERRSSPEAAPEHIDLVSQYGLDELL
TH_4022|M.thermoresistible__bu HNHAVVAMFQAKAATELYR-ESTGSLQHDAPE---------TRYALADFL
*:.**:.:****:* ** : : :
MSMEG_5362|M.smegmatis_MC2_155 RVGS--KSQLRESNSLAAS-
Mvan_4735|M.vanbaalenii_PYR-1 RAGSGTTPAPREGNSLAAS-
Mflv_2005|M.gilvum_PYR-GCK QPGSLTKADAPEGDSLAAS-
MMAR_4437|M.marinum_M TPRGIGSQSAPAATSNRSCA
MUL_4616|M.ulcerans_Agy99 TPRGIGSHSAPAATSNRSCA
TH_4022|M.thermoresistible__bu TPAALQAAGRLERPAGLSLI
. : :