For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3586 | - | - | 100% (112) | hydrogenase expression/synthesis, HypA |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3977 | - | 3e-16 | 33.33% (111) | hydrogenase expression/synthesis, HypA |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1872 | hypA | 2e-41 | 67.57% (111) | hydrogenase expression/synthesis protein, HypA |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_2272 | hypA | 1e-38 | 65.45% (110) | hydrogenase nickel insertion protein HypA |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2358 | - | 8e-45 | 72.97% (111) | hydrogenase expression/synthesis, HypA |
CLUSTAL 2.0.9 multiple sequence alignment TH_3586|M.thermoresistible__bu -------------------VHELSLCQAIAGVVKPHAEGRRVNVVRVQIG Mvan_2358|M.vanbaalenii_PYR-1 ----MSALFRCPCGLILRTVHELSLCHAIAGVVKTHAAGRRVDVVRVRVG MSMEG_2272|M.smegmatis_MC2_155 -------------------MHELSLCQAIAGVVNEHAKGRSVQVVRVRVG MMAR_1872|M.marinum_M MAPVRIHGVEQAHELRLPPMHELALCEAIANVVKTHADGRHVEVVRVRVG Mflv_3977|M.gilvum_PYR-GCK -------------------MHEMAITQSVVDAACAHADGRRVHRVLLEIG :**::: .::.... ** ** *. * :.:* TH_3586|M.thermoresistible__bu ALRQVVPESLEFCWTLVREYEQLADAELELEFIPAAVKCRSCEEDSQIES Mvan_2358|M.vanbaalenii_PYR-1 ALRQVVPDSLLFCWTIVREHEHLGDAELELERVPAAVDCRGCGRQSEIAS MSMEG_2272|M.smegmatis_MC2_155 ALRQVVPDTLTFCWNIVRDQADLADAALELEVVPGVVDCRQCGQRHELTS MMAR_1872|M.marinum_M ALRQVVPESLSFCWTLVRDSENMPDAELELECVTAEVRCRACGQQSEITS Mflv_3977|M.gilvum_PYR-GCK ELCALVPDSMRFCFELATQGTVADGAQLDMDLRPGAAHCRTCHRLFELHD * :**::: **: :. : .* *::: .. . ** * . :: . TH_3586|M.thermoresistible__bu RWSICCPRCSSPDVEVIRGNEFLVTSLEVA------ Mvan_2358|M.vanbaalenii_PYR-1 RWSVCCPSCGSGDVVVVRGDEFLVTSIDVASEVGHG MSMEG_2272|M.smegmatis_MC2_155 RWSILCPSCDSGDVAVVGGEEFLVTSLEVT------ MMAR_1872|M.marinum_M AWSIWCPQCDSSDVEVLHGNEFLVTSLDVS------ Mflv_3977|M.gilvum_PYR-GCK P-ILLCP-CGSADVEVLAGRDLRILSMEVS------ : ** *.* ** *: * :: : *::*: