For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3135 | - | - | 100% (183) | - |
M. thermoresistible (build 8) | TH_1622 | - | 4e-08 | 30.06% (163) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2379 | - | 2e-06 | 27.41% (135) | hypothetical protein Mflv_2379 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1376 | - | 2e-07 | 28.57% (133) | hypothetical protein MMAR_1376 |
M. avium 104 | MAV_5237 | - | 5e-08 | 30.37% (135) | hypothetical protein MAV_5237 |
M. smegmatis MC2 155 | MSMEG_6624 | - | 2e-05 | 27.33% (161) | hypothetical protein MSMEG_6624 |
M. ulcerans Agy99 | MUL_2499 | - | 2e-07 | 28.57% (133) | hypothetical protein MUL_2499 |
M. vanbaalenii PYR-1 | Mvan_4267 | - | 1e-06 | 29.13% (127) | hypothetical protein Mvan_4267 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2379|M.gilvum_PYR-GCK -----------------------------------MTEETDRLEISEVQV Mvan_4267|M.vanbaalenii_PYR-1 -----------------------------------MTRD-DRQEISDVLV MAV_5237|M.avium_104 -----------------------------------MSEREDRQDISELLV MMAR_1376|M.marinum_M ---------------------------------MDISTAIPSPELEALSR MUL_2499|M.ulcerans_Agy99 MRPLRRDCCGVRHGPQAWPVLSTASLSRLALACRCISTAISSPELEALSR MSMEG_6624|M.smegmatis_MC2_155 ----------------------MSSDDEIKQLRERLQYVEDRMAILDCVM TH_3135|M.thermoresistible__bu ------------------------MAGDPITADVLTSEAVARDQIRQCLA : Mflv_2379|M.gilvum_PYR-GCK RYATGIDSRDWSLFRTVFTEDCELDYGEIG----VWNGVDAVTDFMVAAH Mvan_4267|M.vanbaalenii_PYR-1 RYATGIDTRDWPLFRTVFTDDCELDYGEIG----TWRGVDAVVEFMTATH MAV_5237|M.avium_104 RYATGIDRRDWPLFRTVFTDDCVLDYGEIG----HWTGVDAVADFMEQVH MMAR_1376|M.marinum_M RYAAAVDHRDSAALIEVFTPDATMRIHRPGREPALLTGHSELAGIITIVA MUL_2499|M.ulcerans_Agy99 RYAAAVDHRDSAALIEVFTPDATMRIHRPGREPALLTGHSELAGIITIVA MSMEG_6624|M.smegmatis_MC2_155 NQARGHDRHDVELMTSVYFEDGVDEHGPVIK-----TGPEYGEYMNGQHE TH_3135|M.thermoresistible__bu LAAIATDRMDWDLLADCYTSDATVDLGGFFR---GSISEYIASNSSPSGL * . * * : : * . Mflv_2379|M.gilvum_PYR-GCK DMAGHTLHRITNHTALVNGDSATARAYVDALIMA-QDN---ASGVNAAGF Mvan_4267|M.vanbaalenii_PYR-1 EMAGYTLHRITNQAATVDGDTATARAYIDALIMS-QDN---TSGVSAVGF MAV_5237|M.avium_104 ALAGHTLHRLTNQVITVEGDRATARTYIDGLIMA-GDN---NSGVNAIGF MMAR_1376|M.marinum_M RFP-RTVHLVAQSLYVIEGKTASGEVYCTANHFS-EKQGAWRNHVMYIRY MUL_2499|M.ulcerans_Agy99 RFP-RTVHLVAQSLHVIEGKTASGEVYCTANHFS-EEQGAWRNHVMYIRY MSMEG_6624|M.smegmatis_MC2_155 AVFEDHLHNITTHTCEINGDEAHAESYVMGAMRV-KGG---KIVSLMGGR TH_3135|M.thermoresistible__bu PSLERTMHALTTSAIDVRGDRAVAESYCTCYHSGPPDHPWCAGFVVVYVR :* :: : *. * .. * Mflv_2379|M.gilvum_PYR-GCK YDDDLVRTDAGWRIARRRFTTVLVR----TVSAG---------------- Mvan_4267|M.vanbaalenii_PYR-1 YDDELVRTDTGWRIRRRTFTPVLMR----TI------------------- MAV_5237|M.avium_104 YDDEMVRTAHGWRIARRRYTQVRLT----TVGVGS--------------- MMAR_1376|M.marinum_M LDRYLLGGDGAWRISHRTVAIDATEDRPVSITEGGA-------------- MUL_2499|M.ulcerans_Agy99 LDRYLLGGDGAWRISHRTVAIDATEDRPVSITEGGA-------------- MSMEG_6624|M.smegmatis_MC2_155 YLDRLERRNGVWKIALRRCTIEWMISGDSSVLGSGAVQGFIKGTWDRTDP TH_3135|M.thermoresistible__bu FLDELTVSDGRWRIARRRGVFEWGRNE--TTGAALELDPESLGRRDRSDA : *:* * . : Mflv_2379|M.gilvum_PYR-GCK ---------------- Mvan_4267|M.vanbaalenii_PYR-1 ---------------- MAV_5237|M.avium_104 ---------------- MMAR_1376|M.marinum_M ---------------- MUL_2499|M.ulcerans_Agy99 ---------------- MSMEG_6624|M.smegmatis_MC2_155 SYARPLHLDTEPVNRW TH_3135|M.thermoresistible__bu RYQLYAGAGGS-----