For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2746 | - | - | 100% (117) | - |
| M. thermoresistible (build 8) | TH_0798 | - | 8e-06 | 35.29% (51) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3317c | - | 6e-22 | 43.64% (110) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_4794 | - | 1e-14 | 34.29% (105) | hypothetical protein Mflv_4794 |
| M. tuberculosis H37Rv | Rv3289c | - | 6e-22 | 43.64% (110) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2521c | - | 1e-14 | 42.55% (94) | hypothetical protein MAB_2521c |
| M. marinum M | MMAR_1244 | - | 8e-25 | 46.02% (113) | hypothetical protein MMAR_1244 |
| M. avium 104 | MAV_4261 | - | 2e-23 | 45.19% (104) | hypothetical protein MAV_4261 |
| M. smegmatis MC2 155 | MSMEG_1767 | - | 2e-21 | 45.28% (106) | hypothetical protein MSMEG_1767 |
| M. ulcerans Agy99 | MUL_2643 | - | 5e-25 | 48.15% (108) | hypothetical protein MUL_2643 |
| M. vanbaalenii PYR-1 | Mvan_1654 | - | 3e-21 | 46.08% (102) | hypothetical protein Mvan_1654 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3317c|M.bovis_AF2122/97 MHEVGGPSRGDRLGRDDS---EVHSAIRFAVVAAVVGVGFLIMGALLVST
Rv3289c|M.tuberculosis_H37Rv MHEVGGPSRGDRLGRDDS---EVHSAIRFAVVAAVVGVGFLIMGALLVST
MMAR_1244|M.marinum_M MQRVHERSDGDRLGQDDE---EVRAAIRFAALAASAGVGFLIMAALWVST
MUL_2643|M.ulcerans_Agy99 MQRVHERSDGDRLGQDDE---QVRAAIRFAALAASAGVGFLIMAALWVST
MAV_4261|M.avium_104 ----------------------MHAAIRFAVLCAAGAVGFLLIAAVWVST
Mflv_4794|M.gilvum_PYR-GCK MADLSRNT-ELRRSTGVG-DPGVRDAIRTGVGISVAALVFLFVADMWNGT
Mvan_1654|M.vanbaalenii_PYR-1 MTDLSHHSRELRRGADYS-EPGVRDALRTGLGFAAAGATFLFVAMVWIGT
MSMEG_1767|M.smegmatis_MC2_155 MRSPSRSLRSLDGATDRSPHESVREAVKYAAGAAGIAGVFMVMSTLWLST
TH_2746|M.thermoresistible__bu MR-------RVDRPDGRG-------PLRFGLGCAALGGALLMGAAVWVST
MAB_2521c|M.abscessus_ATCC_199 -MNAPMYSDAERKDRDKR---THIHAVRFSAATVALAVVTFVTAIVWMGQ
.:: . . :. . : .
Mb3317c|M.bovis_AF2122/97 CSG---VDTAACGPPQRILLALGGPLILCAAGLWAFLRTYRVWRAEGTWW
Rv3289c|M.tuberculosis_H37Rv CSG---VDTAACGPPQRILLALGGPLILCAAGLWAFLRTYRVWRAEGTWW
MMAR_1244|M.marinum_M CGGRAGVDTAACGMPERTLLALGAPAILFASGIWAFVRTYRVWRDGGTWW
MUL_2643|M.ulcerans_Agy99 CGGRAGVDTAACGMPERTLLALGAPAILFASGIWAFVRTYRVWRDGGTWW
MAV_4261|M.avium_104 CPTG-GVDTVACGPPQRTLLAFGGPLIALAGGIWAFVRTYRVWKARGTWW
Mflv_4794|M.gilvum_PYR-GCK CTGS-LAQAIGCAPSQQAALTLGAPAILLAGGIWSMARGFRVRAG-HSAM
Mvan_1654|M.vanbaalenii_PYR-1 CTGS-LAQAAGCGASQRAMLALGAPAILLVGGVWSIVCSFRRREQ-SARW
MSMEG_1767|M.smegmatis_MC2_155 CVGD-TADAVACGVPQRTLLALAAPGILLAAGMWALARPLQTETSREHTR
TH_2746|M.thermoresistible__bu CSGN-TVDVMACGRPQLTLLALAAPIVLAGGGLWALGRSYQCRRRDGGWR
MAB_2521c|M.abscessus_ATCC_199 CSVSVEVDKTLCGRHGTPAMAMAAPGVLMIGGIIAFVQTYRVWRRRGRWW
* .: *. :::..* : .*: :: :
Mb3317c|M.bovis_AF2122/97 GWHGAGWFLLTLMVLTLCIGVPPIAGPVMAP
Rv3289c|M.tuberculosis_H37Rv GWHGAGWFLLTLMVLTLCIGVPPIAGPVMAP
MMAR_1244|M.marinum_M GWHGAGWFLLTLMVVALSLGVPSIAGPVLAL
MUL_2643|M.ulcerans_Agy99 GWHGAGWFLLTLMVVAVSLGVPSIAGPVLAL
MAV_4261|M.avium_104 GWHGAGWFLLTVMALMVAMGVAPIAGPVLAL
Mflv_4794|M.gilvum_PYR-GCK AWQVAGWTLFTLAVACAVLSLPSLPGR----
Mvan_1654|M.vanbaalenii_PYR-1 AWQAAGWTLLALMVLSVVLSLPSLPWR----
MSMEG_1767|M.smegmatis_MC2_155 AWQGAGLVLLTLMVVALAISLPDLPGLGHL-
TH_2746|M.thermoresistible__bu AWLAAGWFLLTLMVVVVTMSLPTFTDPAIGL
MAB_2521c|M.abscessus_ATCC_199 VWQGAGWFLLLLMVVTLMLSGRMMT------
* ** *: : . :. :.