For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2502 | - | - | 100% (248) | oligopeptide/dipeptide ABC transporter, ATPase subunit |
| M. thermoresistible (build 8) | TH_4070 | - | 1e-58 | 48.54% (239) | PUTATIVE ABC transporter related |
| M. thermoresistible (build 8) | TH_3537 | - | 4e-37 | 37.92% (240) | PUTATIVE oligopeptide/dipeptide ABC transporter, ATPase subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1312c | oppD | 1e-109 | 79.67% (246) | oligopeptide-transport ATP-binding protein ABC transporter |
| M. gilvum PYR-GCK | Mflv_2259 | - | 1e-111 | 82.11% (246) | oligopeptide/dipeptide ABC transporter, ATPase subunit |
| M. tuberculosis H37Rv | Rv1281c | oppD | 1e-109 | 79.67% (246) | oligopeptide-transport ATP-binding protein ABC transporter |
| M. leprae Br4923 | MLBr_01122 | - | 1e-103 | 76.67% (240) | putative ABC transport protein, ATP-binding component |
| M. abscessus ATCC 19977 | MAB_0429 | - | 2e-59 | 49.38% (241) | putative oligopeptide ABC transporter, ATP-binding protein |
| M. marinum M | MMAR_4138 | oppD | 1e-104 | 78.84% (241) | oligopeptide-transport ATP-binding protein ABC transporter |
| M. avium 104 | MAV_1431 | oppD | 1e-106 | 80.49% (246) | ABC transporter, ATP-binding protein OppD |
| M. smegmatis MC2 155 | MSMEG_4997 | oppD | 1e-108 | 80.25% (243) | ABC transporter, ATP-binding protein OppD |
| M. ulcerans Agy99 | MUL_4001 | oppD | 1e-103 | 78.42% (241) | oligopeptide-transport ATP-binding protein ABC transporter |
| M. vanbaalenii PYR-1 | Mvan_4432 | - | 1e-110 | 81.30% (246) | oligopeptide/dipeptide ABC transporter, ATPase subunit |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2259|M.gilvum_PYR-GCK -----MS-LLEVRGLHVTFPTDTEAVPAVRGLDYHVESGEVVALVGESGA
Mvan_4432|M.vanbaalenii_PYR-1 -----MS-LLEVRGLTVTFPTDTDPVPAVRGLDYHVEAGEVVALVGESGA
TH_2502|M.thermoresistible__bu --------------------------------------------------
MSMEG_4997|M.smegmatis_MC2_155 -----MSRLLEVRDLTVAFPTDTDTVHAVRGVSFDIDAREVVALVGESGA
Mb1312c|M.bovis_AF2122/97 -----MSPLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGS
Rv1281c|M.tuberculosis_H37Rv -----MSPLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGS
MLBr_01122|M.leprae_Br4923 -----MSPLLEVTDLAVTFETNGEPVTAVRGISYRINAGEVVAMVGESGS
MMAR_4138|M.marinum_M -----MNPLLEVTDLAVTFPTENDPVTAVRGISYQVAPGEVVAMVGESGS
MUL_4001|M.ulcerans_Agy99 -----MNPLLEVTDLAVTFPTENDPVTAVRGISYQVAPGEVVAVVGESGS
MAV_1431|M.avium_104 -----MSPLLQVTDLAVTFPAGDAPVTAVRGISYRIEPGEVVAMVGESGS
MAB_0429|M.abscessus_ATCC_1997 MEVPTSDSVVDITGLTVDFEVDKQWVPAVKGVSLSVAKGEVLAIVGESGS
Mflv_2259|M.gilvum_PYR-GCK GKSAGAMAVVGLLPEWAEVSGSVRLDGDELLGLDDRQMSRIRGARIGTVF
Mvan_4432|M.vanbaalenii_PYR-1 GKSAGAMAVVGLLPEYAEVSGSVRLHGKELLGLTDRQMSQVRGANIGTVF
TH_2502|M.thermoresistible__bu --------------------------------------------------
MSMEG_4997|M.smegmatis_MC2_155 GKSATAMAVAGLLPEFAEVSGSVLLRGDELLGRSDQDMSRIRGNVIGTVF
Mb1312c|M.bovis_AF2122/97 GKSAAAMAVVGLLPEYAQVRGSVRLQGTELLGLADNAMSRFRGKAIGTVF
Rv1281c|M.tuberculosis_H37Rv GKSAAAMAVVGLLPEYAQVRGSVRLQGTELLGLADNAMSRFRGKAIGTVF
MLBr_01122|M.leprae_Br4923 GKSAAAMAVVGLLPEYAQVRGSVRLHNTELVGLADKTMSRFRGKAIGTVF
MMAR_4138|M.marinum_M GKSAAAMAVVGLLPEYAKVRGSVRLQGTELLGLADDAMSRFRGKVIGTVF
MUL_4001|M.ulcerans_Agy99 GKSAAAMAVVGLLPEYAKVRGSVRLQGTELLGLADDAMSRFRGKVIGTVF
MAV_1431|M.avium_104 GKSVSAMAVMGLLPEHARVRGSVRLHDTELLGLGDDAMSRLRGRAVGMVF
MAB_0429|M.abscessus_ATCC_1997 GKSTTAMAIPALLPPSARVRGSVKLNGAELLGATNDELRAVRGKDVAVIF
Mflv_2259|M.gilvum_PYR-GCK QDPMSALTPVYPVGDQIAEAVRIHQRGVDARAARARAVDLLELVGISQPA
Mvan_4432|M.vanbaalenii_PYR-1 QDPMSALTPVYTVGDQIAEAVRIHRRDIDKGAARKRAVELLELVGIAQPA
TH_2502|M.thermoresistible__bu --------------------------------------------------
MSMEG_4997|M.smegmatis_MC2_155 QDPMSALTPVYTVGDQIAEALQVHNRDMGRRAARARAVELLDLVGIAQPE
Mb1312c|M.bovis_AF2122/97 QDPMSALTPVYTVGDQIAEAIEVHQPRVGKKAARRRAVELLDLVGISQPQ
Rv1281c|M.tuberculosis_H37Rv QDPMSALTPVYTVGDQIAEAIEVHQPRVGKKAARRRAVELLDLVGISQPQ
MLBr_01122|M.leprae_Br4923 QDPMSALTPVYTVGDQITEAIKVHQPRVGKKAAHRRAVELLELVGITQPD
MMAR_4138|M.marinum_M QDPMSALTPVYTVGDQIAETIEIHQPTFSKKAARRRAVELLELVGIAQPE
MUL_4001|M.ulcerans_Agy99 QDPMSALTPVYTVGDQIAETIEIHQPTFSRKAARRRAVELLELVGIAQPE
MAV_1431|M.avium_104 QDPMSALTPVYTVGDQIAEAITIHQPRVGRKAARDRAVELLELVGIAQPQ
MAB_0429|M.abscessus_ATCC_1997 QEPMTALNPVYTIGWQIAEAVCAHK-KMSRRQARDRAVELLDLVDMPEPA
Mflv_2259|M.gilvum_PYR-GCK QRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQILD
Mvan_4432|M.vanbaalenii_PYR-1 RRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQILD
TH_2502|M.thermoresistible__bu --------------------------------------------------
MSMEG_4997|M.smegmatis_MC2_155 RRARSFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQILD
Mb1312c|M.bovis_AF2122/97 RRSRAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQILD
Rv1281c|M.tuberculosis_H37Rv RRSRAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQILD
MLBr_01122|M.leprae_Br4923 RRARAFPHELSGGERQRVVIATAIANDPDLLICDEPTTALDVTVQAQILE
MMAR_4138|M.marinum_M RRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQILD
MUL_4001|M.ulcerans_Agy99 RRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQILD
MAV_1431|M.avium_104 RRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQILE
MAB_0429|M.abscessus_ATCC_1997 KRVKHYPHQLSGGQRQRAMIAQALALDPGLLIADEPTTALDVTVQAEILD
Mflv_2259|M.gilvum_PYR-GCK VLRTARDVTGAGVLIITHDLGVVAEFADRALVMYAGRAVEAAPVSDLYRN
Mvan_4432|M.vanbaalenii_PYR-1 VLRTARDVTGAGVLIITHDLGVVAEFADRALVMYAGRAVETAPVAELYRA
TH_2502|M.thermoresistible__bu --------------------------------------------------
MSMEG_4997|M.smegmatis_MC2_155 VLKTARDVTGAAVLIITHDLGVVAEFADRALVMYAGRTVEQAAVGELYRN
Mb1312c|M.bovis_AF2122/97 VLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVNDLYRD
Rv1281c|M.tuberculosis_H37Rv VLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVNDLYRD
MLBr_01122|M.leprae_Br4923 VLKTARDVTGAGVLIITHDLGVVTEFADQALVMYAGRVVESAQVSTLYRE
MMAR_4138|M.marinum_M VLKTARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVEKATVNDLYHN
MUL_4001|M.ulcerans_Agy99 VLKTARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVEKATVNDLYHN
MAV_1431|M.avium_104 VLKTARDITGAGVLIITHDLGVVAELADRALVMYAGRVVESAAVASLYRD
MAB_0429|M.abscessus_ATCC_1997 LMRDLRHRIDAGIILITHDMGVVADMADRIMVMKDGEVVEQGDAEGIFHR
Mflv_2259|M.gilvum_PYR-GCK RRMPYTAGLLGSVPRLDATQGTRLVPIPGAPPSVTNLPPGCPFTPRCPLA
Mvan_4432|M.vanbaalenii_PYR-1 RRMPYTAGLLGSVPRLDAHQGSRLVPIPGAPPSVTALPPGCPFAPRCPLA
TH_2502|M.thermoresistible__bu --------------------------------------------------
MSMEG_4997|M.smegmatis_MC2_155 ARMPYTVGLLGSVPRLDAPQGTRLIPIPGAPPALTAIPHGCPFAPRCPLA
Mb1312c|M.bovis_AF2122/97 RRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLV
Rv1281c|M.tuberculosis_H37Rv RRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLV
MLBr_01122|M.leprae_Br4923 RQMPYTVGLLGSVPRLDATQGTRLVPIPGAPPSLAGLQQECPFAPRCPLV
MMAR_4138|M.marinum_M RRMPYTIGLLGSVPRLDATQGTRLVPIPGAPPSLAGLDRGCPFAPRCPLV
MUL_4001|M.ulcerans_Agy99 RRMPYTIGLLGSVPRLDATQGTRLVPIPGAPPSPAGLDRGCPFAPRCPLV
MAV_1431|M.avium_104 RRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLDPGCPFAPRCPLA
MAB_0429|M.abscessus_ATCC_1997 AQQPYTRQLLASVPHLGATLHGRDESNP--PP------------------
Mflv_2259|M.gilvum_PYR-GCK VDECSTAEPPLESVAP---NHQVACIRNGDVAGRSAAEIYGVSTSPPRTE
Mvan_4432|M.vanbaalenii_PYR-1 IDECDAAEPDLQPVGP---DHRVACIRNELVAGRSAADLYGVSMTPPTEV
TH_2502|M.thermoresistible__bu --------------------------------------------------
MSMEG_4997|M.smegmatis_MC2_155 IDECTAAEPELVAVSTNSRDHRAACIRTDEVAERSASEIYHVEARPQAPE
Mb1312c|M.bovis_AF2122/97 IDECLTAEPELLDVAT---DHRAACIRTELVTGRSAADIYRVKTEARPAA
Rv1281c|M.tuberculosis_H37Rv IDECLTAEPELLDVAT---DHRAACIRTELVTGRSAADIYRVKTEARPAA
MLBr_01122|M.leprae_Br4923 VDECRLREPELVEVRA---GHRTACIRTDQVSGRSAADIYGINTDTRTSA
MMAR_4138|M.marinum_M IDECRSDEPELIEVGQ---NHRAACIRTDQVNGRSAADIYGVQTEATEPA
MUL_4001|M.ulcerans_Agy99 IDECRSDEPELIEVGQ---NHRAACIRTDQVNGRSAADIYGVQTEATEPA
MAV_1431|M.avium_104 IDECRSQEPELLPVGP---DHRAACIRTDQVDGRSAADIYGVRTQPHPGE
MAB_0429|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_2259|M.gilvum_PYR-GCK AASEDAVALRVEGLTKTFTLTKGLVFRRRIGEVRAVDGISFELQQGRTLG
Mvan_4432|M.vanbaalenii_PYR-1 ARPDDAVALRVTDLTKTYPLTKGVVLRRRIGEVRAVDGISFELQQGRTLG
TH_2502|M.thermoresistible__bu -----------------------XVWRRRIGEVRAVDGISFDLQQGRTLG
MSMEG_4997|M.smegmatis_MC2_155 PTGDAPVVLRVQGLAKTYKLTKGAVFRRQVGEVKAVDDISFELRQGRTLG
Mb1312c|M.bovis_AF2122/97 L-GDASVVVRVRHLVKTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLG
Rv1281c|M.tuberculosis_H37Rv L-GDASVVVRVRHLVKTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLG
MLBr_01122|M.leprae_Br4923 T-SDSSVVVRVRDLVKTYRLTKGVGLRRAIGEIRAVNGVSFELQQGRTLG
MMAR_4138|M.marinum_M P-ADSSVVVRVSDLVKTYPLTKGVLLRRSIGEVRAVDGVNFELRQGHTLG
MUL_4001|M.ulcerans_Agy99 P-ADSSVVVRVSDLVKTYPLTKGVLLRRSIGEVRAVDGVSFELRQGHTLG
MAV_1431|M.avium_104 P-ANSPVVVRVRELSKTYRLTKG-VLRRSAGEVRAVDRISFQLRQGRTLG
MAB_0429|M.abscessus_ATCC_1997 ----TDLALSVEHAVIEYP--------GKSGSFRAVDDVSFTIGRGEVVG
*..:**: :.: : :*..:*
Mflv_2259|M.gilvum_PYR-GCK IVGESGSGKSTTLHQILELSPPQAGTIEVLGRDVAALDRAGRRALRSDLQ
Mvan_4432|M.vanbaalenii_PYR-1 IVGESGSGKSTTLHQILDLRTPQAGTVEVLGRNVATLDRRSRRALRADLQ
TH_2502|M.thermoresistible__bu IVGESGSGKSTTLHEILELTAPQAGSIEVLGSDVARLSAGKRRELRADLQ
MSMEG_4997|M.smegmatis_MC2_155 IVGESGSGKSTTLHQILDLAAPQSGSIEVLGTDVATLDRAARRTLRTDLQ
Mb1312c|M.bovis_AF2122/97 IVGESGSGKSTTLHEILELAAPQSGSIEVLGTDVATLGTAERRSLRRDIQ
Rv1281c|M.tuberculosis_H37Rv IVGESGSGKSTTLHEILELAAPQSGSIEVLGTDVATLGTAERRSLRRDIQ
MLBr_01122|M.leprae_Br4923 IVGESGSGKSTTLHEILRLAVPQSGSIEVLGIDVATLNRASRRSMRRNIQ
MMAR_4138|M.marinum_M IVGESGSGKSTTLHQILELAAPQSGSIEVLGTDVTTLTASSRRALRRDIQ
MUL_4001|M.ulcerans_Agy99 IVGESGSGKSTTLHQILELAAPQSGSIEVLGTDVTTLTASSRRALRRDIQ
MAV_1431|M.avium_104 IVGESGSGKSTTLHEILELVAPQSGSIEVLGTDVAALSPASRRSLRRDIQ
MAB_0429|M.abscessus_ATCC_1997 LVGESGSGKSTIGRAAVGLLRVASGTICVAGQDISTANRKQLRDIRSKVG
:********** : : * :*:: * * ::: * :* .:
Mflv_2259|M.gilvum_PYR-GCK VVFQDPVASLDPRLPVFDILAEPLQDN-GFDKAAIRDRIAELLGVVGLRR
Mvan_4432|M.vanbaalenii_PYR-1 VVFQDPVASLDPRLPVFDVLAEPLQAN-DFDRNAVRDRVAELLAVVGLRR
TH_2502|M.thermoresistible__bu VVFQDPVASLDPRLPVFDVLAEPLQAH-GFDHRRIEQRVAELLEIVGLRR
MSMEG_4997|M.smegmatis_MC2_155 VVFQDPVASLDPRLPVFDVLAEPLIAN-GFDKSARSERVAELLEVVGLRR
Mb1312c|M.bovis_AF2122/97 VVFQDPVASLDPRLPVFDLIAEPLQAN-GFGKNETHARVAELLDIVGLRH
Rv1281c|M.tuberculosis_H37Rv VVFQDPVASLDPRLPVFDLIAEPLQAN-GFGKNETHARVAELLDIVGLRH
MLBr_01122|M.leprae_Br4923 VVFQDPVASLDPRLPVFELIAEPLHAN-GFSKNYTQMRVAELLDIVGLRR
MMAR_4138|M.marinum_M VVFQDPVASLDPRLPISDLLAEPLQAN-GFNKTDTQDRVAELLDIVGLRR
MUL_4001|M.ulcerans_Agy99 VVFQDPVASLDPRLPISDLLAEPLQAN-GFNKTDTQDRVAELLDIVGLRR
MAV_1431|M.avium_104 VVFQDPVASLDPRLPVFELLAEPLRAN-GFDKDHTNARVAELLETVGLRR
MAB_0429|M.abscessus_ATCC_1997 VVFQDPGSSLNPRWPIGQSIAEPLTLHTDMDRTQREGRVKTLLEQVQLPA
****** :**:** *: : :**** : .:.: *: ** * *
Mflv_2259|M.gilvum_PYR-GCK EDASRYPAEFSGGQKQRIGIARALALRPKILALDEPVSALDVSIQAGIVN
Mvan_4432|M.vanbaalenii_PYR-1 EDAGRYPAEFSGGQKQRIGIARALALRPKILALDEPVSALDVSIQAGIIN
TH_2502|M.thermoresistible__bu ADAGRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIIN
MSMEG_4997|M.smegmatis_MC2_155 TDAARYPTEFSGGQKQRIGIARALALRPKIIALDEPVSALDVSIQAGIIN
Mb1312c|M.bovis_AF2122/97 GDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIIN
Rv1281c|M.tuberculosis_H37Rv GDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIIN
MLBr_01122|M.leprae_Br4923 DDATRYPTEFSGGQKQRIGIARALALQPKILAFDEPVSALDVSIQAGIIN
MMAR_4138|M.marinum_M SDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIIN
MUL_4001|M.ulcerans_Agy99 SDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIIN
MAV_1431|M.avium_104 ADAARYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIIN
MAB_0429|M.abscessus_ATCC_1997 AMRNRFPHQLSGGQRQRVGIARALALEPTLLIADEPTSALDVSVQATVLD
*:* ::****:**:********.*.:: ***.******:** :::
Mflv_2259|M.gilvum_PYR-GCK LLLDLQERFGLAYLFVSHDLSVVRHLAHRVAVMNKGVIVEQGDSDQVFGS
Mvan_4432|M.vanbaalenii_PYR-1 LLLDLQDRFGLAYLFVSHDLSVVRHLAHRVAVMHKGVIVEQGDGDQVFDS
TH_2502|M.thermoresistible__bu LLLDLQERFGLSYLFVSHDLSVVRHLAHRVAVMHRGVIVEKGEADQVFTN
MSMEG_4997|M.smegmatis_MC2_155 LLLDLQDRFGLSYLFVSHDLSVVKHLAHDVAVMYKGSIVEQGPSDDVFAH
Mb1312c|M.bovis_AF2122/97 LLLDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGN
Rv1281c|M.tuberculosis_H37Rv LLLDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGN
MLBr_01122|M.leprae_Br4923 LLLDLQDRLGLSYLFVSHDLSVIKHLAHQVAVMLAGTIVEQGDSHDVFRN
MMAR_4138|M.marinum_M LLLDLQARFKLSYLFVSHDLSVVKHLAHSVVVMFAGSIVEQGNSQEVFSN
MUL_4001|M.ulcerans_Agy99 LLLDLQAGFKLSYLFVSHDLSVVKHLANSVVVMFAGSIVEQGNSQEVFSN
MAV_1431|M.avium_104 LLLDLQAQFQLSYLFVSHDLSVVKHLAHDVAVMYAGSIVEQGDSSQVFGN
MAB_0429|M.abscessus_ATCC_1997 LFAELQREHGFACLFISHDLAVVELVASRIAVLNRGRLAEFGSDTQVLTA
*: :** :: **:****:*:. :* :.*: * :.* * :*:
Mflv_2259|M.gilvum_PYR-GCK PRHDYTRRLLDAVPRPQADRR-----------
Mvan_4432|M.vanbaalenii_PYR-1 PQHEYTRQLLAAVPRAQADRR-----------
TH_2502|M.thermoresistible__bu PRHDYTKRLLAAVPQPEPRHR-----------
MSMEG_4997|M.smegmatis_MC2_155 PRHEYTRRLLAAVPQPDPGG------------
Mb1312c|M.bovis_AF2122/97 PKHEYTRRLLGAVPQPDPARRG----------
Rv1281c|M.tuberculosis_H37Rv PKHEYTRRLLGAVPQPDPARRG----------
MLBr_01122|M.leprae_Br4923 PQHDYTRRLLGAIPRPEVG-------------
MMAR_4138|M.marinum_M PQHEYTQRLLGAVPQPIPGNAD----------
MUL_4001|M.ulcerans_Agy99 PQHEYTQRLLGAVPQPIPGNAD----------
MAV_1431|M.avium_104 PQHEYTRRLLDAVPQPNPGSRG----------
MAB_0429|M.abscessus_ATCC_1997 PKDDYTKRLLAAVPVPDPEQQRIRREERQALR
*:.:**::** *:* .