For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2437 | - | - | 100% (189) | - |
| M. thermoresistible (build 8) | TH_3795 | - | 1e-67 | 68.93% (177) | PUTATIVE - |
| M. thermoresistible (build 8) | TH_4651 | - | 8e-15 | 28.89% (180) | PUTATIVE conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1735 | - | 2e-27 | 33.33% (219) | hypothetical protein Mflv_1735 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2799 | - | 3e-21 | 30.59% (219) | hypothetical protein MAB_2799 |
| M. marinum M | MMAR_1541 | - | 2e-22 | 30.60% (232) | hypothetical protein MMAR_1541 |
| M. avium 104 | MAV_3943 | - | 1e-23 | 32.60% (227) | hypothetical protein MAV_3943 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2391 | - | 7e-22 | 30.17% (232) | hypothetical protein MUL_2391 |
| M. vanbaalenii PYR-1 | Mvan_5016 | - | 2e-25 | 34.31% (204) | hypothetical protein Mvan_5016 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1541|M.marinum_M -MPISAVIRRAA-----VLAVCLVVSIS-APSAGAQPDAQPPP------G
MUL_2391|M.ulcerans_Agy99 MMPISAVIRRAA-----VLAVCLVVSIS-APSAGAQPDAQPPP------G
MAV_3943|M.avium_104 -----MVVRRAL-----VAAVCLALSLPTAPTTGADPDAAPPPP-----E
MAB_2799|M.abscessus_ATCC_1997 --MLKSLVSLTT-----VCALALTAPLAFADPEDPNPAPAPAPAQPVAND
Mflv_1735|M.gilvum_PYR-GCK ---MRVAATTAV------AVLGLAGATS-ASAQPDP-VSPVAPGVQAVAD
Mvan_5016|M.vanbaalenii_PYR-1 ---MSVIAARVLGLALLLCALGFAGQIPPAPAQPDTRVPPVADVPPPVAE
TH_2437|M.thermoresistible__bu ---MGAVRWCAG---VLGAAVVFGSVLXXXPAAEVQAEPAPPE-------
. .: : . . .
MMAR_1541|M.marinum_M AVPP------DDGAVPPGTPAKITTPDGWVLALGAKDEKHVPVAPMTTAI
MUL_2391|M.ulcerans_Agy99 AVPP------DDGAVPPGTPAKITTPDGWVLALGAKDEKHVPVAPMTTAI
MAV_3943|M.avium_104 AAPA------AEGALPSNPPAILKTPDGWTLGLGARDEQQVPVAPLTTAL
MAB_2799|M.abscessus_ATCC_1997 VPPG------PDGAIASAEPGNLITPDGWTVTVAGKNESLLPVAPLTTAL
Mflv_1735|M.gilvum_PYR-GCK VGPP----PAPDGAVASGPPGFVVTPDGWELTVSAKDEFQVAVAPLTTAL
Mvan_5016|M.vanbaalenii_PYR-1 VPPPTGAVPPPAGAVPSGPAGTVLTPDGWELTVAARDEYQVAVAPLTTAL
TH_2437|M.thermoresistible__bu GPVP----------VPSAEPVSTKTTDGWTLALSANSETLTPATPPSPEL
:.. . *.*** : :....* ..:* :. :
MMAR_1541|M.marinum_M SSREYLSSGIFGASLTGP-----ETPRGILEVGYEIGCGIDMSTSNGFVM
MUL_2391|M.ulcerans_Agy99 SSREYLSSGIFGASLTGP-----ETPRGILEVGYEIGCGIDMSTSNGFVM
MAV_3943|M.avium_104 SSREYLASGIFVGSLSGP-----TQPQGVLEVGYEIGCGIDMSTSDGVTI
MAB_2799|M.abscessus_ATCC_1997 SSREYIVGGSFIGAVSGAG--KTKLAGGSLEAGYQIGCGI---------M
Mflv_1735|M.gilvum_PYR-GCK SSREYLVAGTFEGAVAGAG--TAPTSGGTLEVGYQIGCGISLN---VVKL
Mvan_5016|M.vanbaalenii_PYR-1 SSREYLVAATFTGSVKGSG--TSGLAGGTLEVGYQIGCGISLN---VVKL
TH_2437|M.thermoresistible__bu ETRDFIVSGLFNGTLRNEYGGTSPTPKGTLEVGYQVQCVP----------
.:*::: .. * .:: . . * **.**:: *
MMAR_1541|M.marinum_M ANSGGVAPSIGAELPLGPGQPPILIPLITGQYNNVVSVGLKPGFVVVVPV
MUL_2391|M.ulcerans_Agy99 ANSGGVAPSIGAELPLGPGQPPILIPLITGQYNNVVSVGLKPGFVVVVPV
MAV_3943|M.avium_104 GGTAGITPGVTGPVTGVPGD---VLPLVVAPIAGVLNVGLKPGLVIVVPV
MAB_2799|M.abscessus_ATCC_1997 GGPVELTAGIG--LSGGFGTSG--LTSVSLPINGLVKVDLKPGQVTIVPV
Mflv_1735|M.gilvum_PYR-GCK NGSAGFTPSIN---DQRRLG-------VAFPVSAQIEVFPQPGEVTTVQL
Mvan_5016|M.vanbaalenii_PYR-1 NGSVGITPSVT---PTGLGN-------TRIPVTAQIEVFPQPGEVITVQL
TH_2437|M.thermoresistible__bu ---------------------------------SGMLAAMKP-AATTIQV
: . :* . : :
MMAR_1541|M.marinum_M VRKEFKGANPWIMISAFHLKIDGCVGQSFVRSYATLTRITDESDVVLSYV
MUL_2391|M.ulcerans_Agy99 VRKEFKGANPWIMISAFYLKIDGCVGQSFVRSYATLTQITDESDVVLSYV
MAV_3943|M.avium_104 VKKQFRGPNPWVMVSNFHVKIDGCVGQSFIRSYAVLNRVTDESDVVLSYV
MAB_2799|M.abscessus_ATCC_1997 NKKSFEGKTTRTTITGFRIKIDSCVGQSFIRSYATMTSSTDNTDDVVTYM
Mflv_1735|M.gilvum_PYR-GCK TQKTFEGSNPRVTVKDVHIKVDGCVGESFLRSYAVLTSSTDAADDIVAYY
Mvan_5016|M.vanbaalenii_PYR-1 TQKEFEGTDPRVTVKDVHVKIDGCIGQSFLRSYAILTSSTDTADDIVAYY
TH_2437|M.thermoresistible__bu SKEEFSGANPSAAVSDYRVQVD-CLGPALIRSYAILTRTTSAADSVVAYY
:: * * . :. :::* *:* :::**** :. *. :* :::*
MMAR_1541|M.marinum_M GSTKAV
MUL_2391|M.ulcerans_Agy99 GSTKAV
MAV_3943|M.avium_104 GVTKAV
MAB_2799|M.abscessus_ATCC_1997 GITKAV
Mflv_1735|M.gilvum_PYR-GCK GVTKAV
Mvan_5016|M.vanbaalenii_PYR-1 GIAKAV
TH_2437|M.thermoresistible__bu GISHPV
* ::.*