For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2074 | - | - | 100% (85) | conserved hypothetical protein |
M. thermoresistible (build 8) | TH_2253 | - | 1e-14 | 44.74% (76) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0536c | - | 2e-12 | 42.67% (75) | hypothetical protein Mb0536c |
M. gilvum PYR-GCK | Mflv_1991 | - | 8e-29 | 67.07% (82) | hypothetical protein Mflv_1991 |
M. tuberculosis H37Rv | Rv0523c | - | 3e-12 | 42.67% (75) | hypothetical protein Rv0523c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3980 | - | 4e-12 | 45.95% (74) | hypothetical protein MAB_3980 |
M. marinum M | MMAR_3396 | - | 9e-08 | 44.44% (54) | hypothetical protein MMAR_3396 |
M. avium 104 | MAV_4623 | - | 1e-14 | 45.07% (71) | hypothetical protein MAV_4623 |
M. smegmatis MC2 155 | MSMEG_5376 | - | 7e-28 | 67.95% (78) | hypothetical protein MSMEG_5376 |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0859 | - | 4e-16 | 45.33% (75) | hypothetical protein Mvan_0859 |
CLUSTAL 2.0.9 multiple sequence alignment TH_2074|M.thermoresistible__bu -------------------------------------------------- Mflv_1991|M.gilvum_PYR-GCK -------------MPRRVAEFNRRVTNPATKSLTPWLPNLGTLEHVGRKS MSMEG_5376|M.smegmatis_MC2_155 -----------MRAPRQVAEFNKRFTNPAARAITPWLPYLGTLEHVGRKS Mb0536c|M.bovis_AF2122/97 -----------MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRS Rv0523c|M.tuberculosis_H37Rv -----------MQLPQWLARFNRYVTNPIQRLWAGWLPAFAILEHVGRRS MAV_4623|M.avium_104 MSPGACELDGGMQLPQGLARFNRHVTNPIQRMWAGWLPPFGIVEHVGRRS Mvan_0859|M.vanbaalenii_PYR-1 -----------MQLPQWLARFNRHVTNPIQRLWAGWAPTMGILEHAGRKS MAB_3980|M.abscessus_ATCC_1997 -----------MQIPQSVARFNKYVTNPVQRLWAGWAPSFAIIEHKGRKS MMAR_3396|M.marinum_M -----------MPAPRWVAKANKISLNRFTKYVAPWAPGWAVVVHRGRKS TH_2074|M.thermoresistible__bu --------LVFPT-RDG---FVFLVGYGPESDWVKNVLAAGAAVLHKRGK Mflv_1991|M.gilvum_PYR-GCK ARRYRTPLLVFET-ADG---YAILIGYGPQTDWVKNVLAGGPTVLHKRGR MSMEG_5376|M.smegmatis_MC2_155 GKCYRTPLLVFET-HDG---YAILVGYGPQTDWLKNVLAGGQTVLHKRGR Mb0536c|M.bovis_AF2122/97 GKPYRTPLNVFSADVDGRAGVAILLTYGPNRDWLKNITAAGGGRMRRYGK Rv0523c|M.tuberculosis_H37Rv GKPYRTPLNVFSADVDGRAGVAILLTYGPNRDWLKNITAAGGGRMRRYGK MAV_4623|M.avium_104 GKPYRTPVNLFSADVDGKPGVAILLTYGPDRDWLKNLTAAGGGRIRSRGK Mvan_0859|M.vanbaalenii_PYR-1 GKRYRTPLTVFST-ADG---VAILLTYGPDRDWLKNVVAAGGGTMRRYGR MAB_3980|M.abscessus_ATCC_1997 GKEFRTPVTAFTT-PDG---VAILLTYGPDRDWLKNLQAAGGGRVVRRGK MMAR_3396|M.marinum_M GRTFRTPLWAFHR-RNG---FVIALTYGTSSDWVKNVLAAGGCELETRRR * :* .: : **.. **:**: *.* : : TH_2074|M.thermoresistible__bu AVALADPRLVSKAEAAQLITPGSRLFYRLFPYDEAALVLTKSAPPQ--- Mflv_1991|M.gilvum_PYR-GCK AVVLTDPRVVSKAEAAPLVVARARPFYRLFPYDEGALLLTDAGPAR--- MSMEG_5376|M.smegmatis_MC2_155 AIALGNPRVVSKAEAAALVAPRSRWLYRVFPYDEATLLLTHGGSAG--- Mb0536c|M.bovis_AF2122/97 TFGVANPRRLTKAEAAPYVSSRWRPVFARLPFDEAVLLTKAD------- Rv0523c|M.tuberculosis_H37Rv TFGVANPRRLTKAEAAPYVSSRWRPVFARLPFDEAVLLTKAD------- MAV_4623|M.avium_104 TFGVADPRVVSKAEAASHLRPGVRGVFARLPFEQAVLLTRTP------- Mvan_0859|M.vanbaalenii_PYR-1 TFAVRDPRVMTKAEAAPLVTGVMRPVFALLPFEQAVLLDRG-------- MAB_3980|M.abscessus_ATCC_1997 THDVVNPRVVSRDEAATLVKS--R-AFGRLPFEQAVLLTYA-------- MMAR_3396|M.marinum_M RYQLGDP-VVFRDEDATDMPAFIRFMLRRVLKAPEFLKLDVVRELAPAG : :* : : * * : * . *