For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1964 | - | 100% (156) | CONSERVED HYPOTHETICAL PROTEIN | |
| M. thermoresistible (build 8) | TH_4432 | - | 2e-13 | 38.05% (113) | PUTATIVE conserved hypothetical protein |
| M. thermoresistible (build 8) | TH_1375 | - | 2e-07 | 30.46% (151) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1915c | - | 2e-64 | 75.50% (151) | hypothetical protein Mb1915c |
| M. gilvum PYR-GCK | Mflv_2072 | - | 5e-14 | 41.67% (108) | hypothetical protein Mflv_2072 |
| M. tuberculosis H37Rv | Rv1883c | - | 6e-60 | 72.85% (151) | hypothetical protein Rv1883c |
| M. leprae Br4923 | MLBr_02031 | - | 1e-61 | 72.00% (150) | hypothetical protein MLBr_02031 |
| M. abscessus ATCC 19977 | MAB_3954c | - | 1e-49 | 60.53% (152) | hypothetical protein MAB_3954c |
| M. marinum M | MMAR_2771 | - | 2e-62 | 76.22% (143) | hypothetical protein MMAR_2771 |
| M. avium 104 | MAV_2819 | - | 1e-63 | 75.33% (150) | cyclase/dehydrase superfamily protein |
| M. smegmatis MC2 155 | MSMEG_5690 | - | 3e-08 | 28.86% (149) | hypothetical protein MSMEG_5690 |
| M. ulcerans Agy99 | MUL_2976 | - | 1e-62 | 72.85% (151) | hypothetical protein MUL_2976 |
| M. vanbaalenii PYR-1 | Mvan_4642 | - | 1e-13 | 41.18% (119) | hypothetical protein Mvan_4642 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2072|M.gilvum_PYR-GCK ---MTELKRSGSIAVAVPPEKLYALVSDVTRTGEWSP-VCKACWWDEGAG
Mvan_4642|M.vanbaalenii_PYR-1 --------MSESISVAVSPEQLYALVADVTRMGEWSP-VCRACWWDDGAG
MMAR_2771|M.marinum_M --------------MAAPADKIWDLIADIRNTGRFSPETFEAEWLDGATG
MUL_2976|M.ulcerans_Agy99 ------MKGSATVHMAAPADKIWDLIAEIRNTGRFSPETFEAEWLDGATG
Mb1915c|M.bovis_AF2122/97 MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATG
Rv1883c|M.tuberculosis_H37Rv MCLDQVMEGSATVHMAAPPDKIWTLIADVRNTGRFSPETFEAEWLDGATG
MLBr_02031|M.leprae_Br4923 ------MEGSVTVHMAAPADKVWNLIADVRNTGRFSPETFEAEWLDDVTG
MAV_2819|M.avium_104 ------MEGSATVHMAAPAAKIWDLIADVRNMGRFSPEVFEAEWLGGATG
TH_1964|M.thermoresistible__bu ----MSVQGSVTVSMAAPAERIWDLIADVRNTGRFSPETFEAEWLDGATG
MAB_3954c|M.abscessus_ATCC_199 ------MRDSVTVHIAAPADKIWALVSDITNTGKFSPETFEAEWLDGATE
MSMEG_5690|M.smegmatis_MC2_155 ---MAAPLLQAQIDIDAPVERVWSLISDLRRMPEWSP----QCRLMKTIG
: .. ::: *:::: . .:**
Mflv_2072|M.gilvum_PYR-GCK PRVGAWFTGRNELPER--TWETRSQVVAAEPGREFAWEVNDGW----VRW
Mvan_4642|M.vanbaalenii_PYR-1 PQVGAWFTGRNVTPER--TWEARCQVVAAEPGRRFAWEVNHGW----AYW
MMAR_2771|M.marinum_M PALGARFRGHVRRNEIGPVYWTVCEVTACEPSREFGFAVMMGD-RPVNNW
MUL_2976|M.ulcerans_Agy99 PALGARFWGHVRRNEIGPVYWTVCEVTACEPSREFEFAVMMGD-RPVNNW
Mb1915c|M.bovis_AF2122/97 PALGARFRGHVRRNGIGPVYWTVCEVTACEPGREFGFAVLLGD-RPVNNW
Rv1883c|M.tuberculosis_H37Rv PALGARFRGHVRRNGIGPVYWTVCE-----PGREFGFAVLLGD-RPVNNW
MLBr_02031|M.leprae_Br4923 PALNAKFRGHVRRNEIGPVYWTTCKVTACEPGREFGFTVLLGN-KPVNNW
MAV_2819|M.avium_104 PALGAKFRGHVRRNEIGPVYWTTCKVTACEPGREFGFTVLLGD-REVNNW
TH_1964|M.thermoresistible__bu PALGARFRGHVRRNEIGPVYWTTCRVTACEPGREFGFEVLVGD-RPVNNW
MAB_3954c|M.abscessus_ATCC_199 PAVGVRFRGHVKRNQKGPVYWTVCRVVECERGRSFGFAVLWPNGKTVNTW
MSMEG_5690|M.smegmatis_MC2_155 PLRPGALTVNLNRRNF-MFWPTTCHILEVIPQQKLAFRVDLNK----TVW
* : . : : .. : : : * *
Mflv_2072|M.gilvum_PYR-GCK GYTLEPDGDGTLLTESWEFLPKGIDGFRERFGSEADAEIVTRSDAARDGI
Mvan_4642|M.vanbaalenii_PYR-1 GYEMAAEDGGTRLTESWELLPEGVAGLRERYGETGDAEIAKRSEAARSGI
MMAR_2771|M.marinum_M HYRLAPSGGGTDVTESFRLAES---PLSTVYYWMFGGWLRKRRNIR--DM
MUL_2976|M.ulcerans_Agy99 HYRLAPSGGGTDVTESFRLAES---PLSTVYYWMFGGWLRKRRNIR--DM
Mb1915c|M.bovis_AF2122/97 HYRLTPTADGTEVTESFRLPPS---VLTTVYYRVFGGWLRQRRNIR--DM
Rv1883c|M.tuberculosis_H37Rv HYRLTPTADGTEVTESFRLPPS---VLTTVYYRVFGGWLRQRRNIR--DM
MLBr_02031|M.leprae_Br4923 HYRLVTSGDGTYVTESFRFNRS---PLLTVY-WLLGGFLRKRRNIR--DM
MAV_2819|M.avium_104 HYRLAPSGGGTDVTESFRLNPA---PWLPVY-WVFGGFLRKRRNIR--DM
TH_1964|M.thermoresistible__bu HYRLTPVDGGTEVTESFRLNDV---APLRLIMPVWGPWRR-RRNVR--DM
MAB_3954c|M.abscessus_ATCC_199 RYRFEPAGDGTDVTESFELAPT---LPLRIYWALLG-WARGRTNRN--GM
MSMEG_5690|M.smegmatis_MC2_155 AYELEPTETGTRVTESRHAENGTTAVSNAVITAFFGGVPNFEGELIE-GM
* : . ** :*** . . . : .:
Mflv_2072|M.gilvum_PYR-GCK PATLAAIRRIAEAG--
Mvan_4642|M.vanbaalenii_PYR-1 PATLEAIKRTAESG--
MMAR_2771|M.marinum_M TKTLNRIKDVVEAA--
MUL_2976|M.ulcerans_Agy99 TKTLNRIKDVVEAA--
Mb1915c|M.bovis_AF2122/97 TKTLQRIKDLVEAG--
Rv1883c|M.tuberculosis_H37Rv TKTLQRIKDLVEAG--
MLBr_02031|M.leprae_Br4923 TKTLRRIKDVVEAE--
MAV_2819|M.avium_104 TKTLNRIKDVVEADAP
TH_1964|M.thermoresistible__bu RRTLERIKAVVEAPDA
MAB_3954c|M.abscessus_ATCC_199 RETLNRIKAVAEAP--
MSMEG_5690|M.smegmatis_MC2_155 NQSLARIKAAAER---
:* *: .*