For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1951 | - | - | 100% (217) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1867 | - | 1e-81 | 70.05% (207) | hypothetical protein MMAR_1867 |
| M. avium 104 | MAV_2684 | - | 4e-75 | 75.56% (180) | hypothetical protein MAV_2684 |
| M. smegmatis MC2 155 | MSMEG_2717 | - | 1e-75 | 73.66% (186) | hypothetical protein MSMEG_2717 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2412 | - | 1e-88 | 77.34% (203) | hypothetical protein Mvan_2412 |
CLUSTAL 2.0.9 multiple sequence alignment
TH_1951|M.thermoresistible__bu VTNVGETPTATNVLARIRAARSAPQPVGERCEMCAEPIPDAHQHVVDVAG
MSMEG_2717|M.smegmatis_MC2_155 --------------------------------MCAEPIGGHHQHVVNVEG
Mvan_2412|M.vanbaalenii_PYR-1 ---MPAASSIPAVLARIRADRGARQTAGERCEMCAEPIAAEHQHVVDVDI
MMAR_1867|M.marinum_M ------MNTAYDVLARITANRRPPEPAGERCEMCATEIADEHQHVVNVAG
MAV_2684|M.avium_104 --------------------------------MCSEPIADEHQHVVNVEG
**: * *****:*
TH_1951|M.thermoresistible__bu RQLMCVCRGCYLLFTDVTAGLRYRAVPDRYLAFLGFALDRRRWEALQIPV
MSMEG_2717|M.smegmatis_MC2_155 RQLMCVCRACYLLFTHDHAELRYRAVPDRYLTFPQFALDRRELEALQIPV
Mvan_2412|M.vanbaalenii_PYR-1 RQLMCVCRGCYLLFTDTAAQLRYRAVPDRYLTFPDFAMDRRAWEVLQIPV
MMAR_1867|M.marinum_M RQLMCVCRACYLLFTDSAAELRYRAVPDRYLWFPDFALDRRAWDALQIPV
MAV_2684|M.avium_104 RQLMCVCRPCYLLFTNSDAHLRYRAVPDRYLALPDFALDRLQWEALQIPV
******** ******. * *********** : **:** :.*****
TH_1951|M.thermoresistible__bu GLAFFFRNSQLGRTVAFYPGPAGATESELDLTAWNDVRNADPRVDLLAVD
MSMEG_2717|M.smegmatis_MC2_155 GVVFFMRNSVLGRVAAFYPGPAGATESELDLTAWQDIENADPRATLLADD
Mvan_2412|M.vanbaalenii_PYR-1 GLAFFFRNSSLGRTVAFYPGPAGATESELDLRSWNDIRAADPRVDCLAVD
MMAR_1867|M.marinum_M GVAFFFTNSALGRTVAFYPGPAGACESELDLDVWSDLKDGDKRLELLADD
MAV_2684|M.avium_104 GLAFFFRNSALDRTVAFYPGPAGATESELDLDAWTAISAADPRVGLLADD
*:.**: ** *.*..********* ****** * : .* * ** *
TH_1951|M.thermoresistible__bu TEALLIRVP--DHEPGEPRCHLVPIDACYEFVGRLRMLWRGFDGGSDAHR
MSMEG_2717|M.smegmatis_MC2_155 TEALVLRVDQSDDENTAPACHLVPIDTCYEFVGRLRLLWRGFDGGQDVRR
Mvan_2412|M.vanbaalenii_PYR-1 TEALLVRAP----DTGAPRAYLVPIDACYEFVGRLRMLWHGFDGGQDAHD
MMAR_1867|M.marinum_M VEALLVQVP---ES-GAPRSYLVPIDACYEFVGRLRMLWRGFDGGQQARE
MAV_2684|M.avium_104 VEALLVRVP---DDEQPPDCYLVPIDACYEFVGRLRRLWRGFDGGQESRQ
.***:::. . * .:*****:********* **:*****.: :
TH_1951|M.thermoresistible__bu HIEEFFTTLAER---STPVPP--
MSMEG_2717|M.smegmatis_MC2_155 YIAEFFGSLRER---GTEVPP--
Mvan_2412|M.vanbaalenii_PYR-1 YVDRFFGLLDER---ARVVPRT-
MMAR_1867|M.marinum_M FIDSFFAKVAGK---AVETPR--
MAV_2684|M.avium_104 FIDEFFARLAGRSTVAGSTERQP
.: ** : : . .