For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_1867 | - | 100% (143) | CONSERVED HYPOTHETICAL PROTEIN | |
M. thermoresistible (build 8) | TH_0193 | - | 1e-38 | 56.92% (130) | MaoC like domain protein |
M. thermoresistible (build 8) | TH_2505 | - | 6e-07 | 26.74% (86) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0655 | - | 4e-70 | 88.03% (142) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
M. gilvum PYR-GCK | Mflv_5120 | - | 5e-73 | 91.55% (142) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
M. tuberculosis H37Rv | Rv0636 | - | 1e-70 | 88.73% (142) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
M. leprae Br4923 | MLBr_01909 | - | 3e-67 | 84.51% (142) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
M. abscessus ATCC 19977 | MAB_3897c | - | 2e-62 | 81.12% (143) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
M. marinum M | MMAR_0969 | - | 3e-69 | 86.62% (142) | hypothetical protein MMAR_0969 |
M. avium 104 | MAV_4526 | - | 7e-66 | 88.06% (134) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
M. smegmatis MC2 155 | MSMEG_1341 | - | 2e-68 | 86.62% (142) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
M. ulcerans Agy99 | MUL_0721 | - | 2e-69 | 86.62% (142) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
M. vanbaalenii PYR-1 | Mvan_1231 | - | 3e-73 | 92.25% (142) | (3R)-hydroxyacyl-ACP dehydratase subunit HadB |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_5120|M.gilvum_PYR-GCK MALREFSSVKVGDLLPEKVIPLTRADLVNYAGVSGDLNPIHWDDEIAKQV Mvan_1231|M.vanbaalenii_PYR-1 MALREFSSVKVGDQLPEKVIPLTRADLVNYAGVSGDLNPIHWDDEIAKQV MSMEG_1341|M.smegmatis_MC2_155 MALREFSSVKVGDTLPERVITLTRGDLVNYAGVSGDLNPIHWDDEIAKQV TH_1867|M.thermoresistible__bu MALRKFDSVKVGDKLPEKVIPLTRADLVNYAGVSGDLNPIHWDDEIAKQV MLBr_01909|M.leprae_Br4923 MARREFSSVKVGDLLPEKTYPLTRQDLVNYAGVSGDLNPIHWDDEIAKVV MAV_4526|M.avium_104 --------MKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVV Mb0655|M.bovis_AF2122/97 MALREFSSVKVGDQLPEKTYPLTRQDLVNYAGVSGDLNPIHWDDEIAKVV Rv0636|M.tuberculosis_H37Rv MALREFSSVKVGDQLPEKTYPLTRQDLVNYAGVSGDLNPIHWDDEIAKVV MMAR_0969|M.marinum_M MALREFSSVNVGDQLPERTYPLTRQDLVNYAGVSGDLNPIHWDDEIAKLV MUL_0721|M.ulcerans_Agy99 MALREFSSVNVGDQLPERTYPLTRQDLVNYAGVSGDLNPIHWDDEIAKLV MAB_3897c|M.abscessus_ATCC_199 MALREFSSVNVGDQLPEKTIQLTRQDLVNYAGVSGDLNPIHWDDETAKLV ::*** ***:. *** ******************** ** * Mflv_5120|M.gilvum_PYR-GCK GLDT-AIAHGMLTMGLGGGYVTEWVGDPAAVTEYNVRFTAVVPVPNDGKG Mvan_1231|M.vanbaalenii_PYR-1 GLDT-AIAHGMLTMGLGGGYVTSWVGDPAAVTEYNVRFTAVVPVPNDGKG MSMEG_1341|M.smegmatis_MC2_155 GLDT-AIAHGMLTMGLGGGYVTSWVGDPAAVTEYNVRFTAVVPVPNDGVG TH_1867|M.thermoresistible__bu GLDT-AIAHGMLTMGMGGGYITEWVGDPAAVTEYNVRFTAVVPVPNDGKG MLBr_01909|M.leprae_Br4923 GLDT-AIAHGMLTMGIGGGYVTSWVGDPGAVIEYNVRFTAVVPVPNDGQG MAV_4526|M.avium_104 GLDT-AIAHGMLTMGIGGGYVTAWIGDPGAVTEYNVRFTAVVPVPNDGKG Mb0655|M.bovis_AF2122/97 GLDA-AIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVPNDGKG Rv0636|M.tuberculosis_H37Rv GLDT-AIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVPNDGKG MMAR_0969|M.marinum_M GLDT-AIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVPNDGKG MUL_0721|M.ulcerans_Agy99 GLDT-AIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVPNDGKG MAB_3897c|M.abscessus_ATCC_199 GLEDGAIAHGMLTMGLGGGYLTEWIGDPAAVTEYNVRFTSFVTVPNDGVG **: **********:****:* *:***.** *******:.*.***** * Mflv_5120|M.gilvum_PYR-GCK AEIVFNGRVKSVDPESRSVTIALSATSGGKKIFGRAVAIAKLA Mvan_1231|M.vanbaalenii_PYR-1 AEIVFNGRVKSVDPESKSVTIALSATSGGKKIFGRAIAVAKLA MSMEG_1341|M.smegmatis_MC2_155 AEITFNGRVKSVDAEEKLVTIAISATAGGKKIFGRAVATARLA TH_1867|M.thermoresistible__bu AEIVFGGRVKSVDPETKSVTIALTATAGGKKIFGRAIATAKLA MLBr_01909|M.leprae_Br4923 AVLVFSGKVKSVDPDTKSVTIALSATTGGKKIFGRAIASAKLA MAV_4526|M.avium_104 AELVFNGRVKSADPETKSVTIALTATTGGKKIFGRAIASAILA Mb0655|M.bovis_AF2122/97 AELVFNGRVKSVDPESKSVTIALTATTGGKKIFGRAIASAKLA Rv0636|M.tuberculosis_H37Rv AELVFNGRVKSVDPESKSVTIALTATTGGKKIFGRAIASAKLA MMAR_0969|M.marinum_M AELVFNGRVKSVDPDSKSVTIALTATTGGKKIFGRAIASAKLA MUL_0721|M.ulcerans_Agy99 AELVFNGRVKSVDPDSKSVTIALTATTGGKKIFGRAIASAKLA MAB_3897c|M.abscessus_ATCC_199 AEIVFSGRVKSVDADAKSVTIALTATTNGKKIFGRAVASATLA * :.*.*:***.*.: : ****::**:.********:* * **