For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1682 | - | - | 100% (98) | TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB3 |
| M. thermoresistible (build 8) | TH_0669 | whiB1 | 6e-14 | 43.21% (81) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE |
| M. thermoresistible (build 8) | TH_1624 | whiB4 | 6e-11 | 37.18% (78) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3450 | whiB3 | 2e-42 | 69.61% (102) | transcriptional regulatory protein WHIB-like WHIB3 |
| M. gilvum PYR-GCK | Mflv_4914 | - | 8e-48 | 83.51% (97) | transcription factor WhiB |
| M. tuberculosis H37Rv | Rv3416 | whiB3 | 2e-42 | 69.61% (102) | transcriptional regulatory protein WHIB-like WHIB3 |
| M. leprae Br4923 | MLBr_00382 | whiB3 | 4e-42 | 72.92% (96) | putative transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_3726 | - | 4e-47 | 82.47% (97) | WhiB family transcriptional regulator |
| M. marinum M | MMAR_1132 | whiB3 | 1e-43 | 71.57% (102) | WhiB-like regulatory protein, WhiB3 |
| M. avium 104 | MAV_4361 | - | 3e-32 | 72.62% (84) | transcription factor WhiB |
| M. smegmatis MC2 155 | MSMEG_1597 | - | 4e-48 | 84.54% (97) | transcription factor WhiB |
| M. ulcerans Agy99 | MUL_0895 | whiB3 | 4e-43 | 70.59% (102) | Whib-like regulatory protein, WhiB3 |
| M. vanbaalenii PYR-1 | Mvan_1506 | - | 1e-47 | 83.51% (97) | transcription factor WhiB |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3450|M.bovis_AF2122/97 MPQPEQLPGPNADIWNWQLQGLCRGMDSSMFFHPDGERGRARTQREQRAK
Rv3416|M.tuberculosis_H37Rv MPQPEQLPGPNADIWNWQLQGLCRGMDSSMFFHPDGERGRARTQREQRAK
MMAR_1132|M.marinum_M MPQPEQLPGPNADIWNWQLQGLCRGVDSSMFFHPDGERGRARMQREQRAK
MUL_0895|M.ulcerans_Agy99 MPQPEQLPGPNADIWNWQLQGLCRGVDSSMFFHPDGERGRARMQREQRAK
MAV_4361|M.avium_104 ------------------MHGLCRGVDSSMFFHPDGERGRARMQREQRAK
MLBr_00382|M.leprae_Br4923 MPQPKQLPGPNATIWNWQLQGLCRGVDSSMFFHPDGERGRARMQREQRAK
Mflv_4914|M.gilvum_PYR-GCK MPQPQQLPGPNADIWDWQMQGVCRGVDSAMFFHPDGERGRARAQREMRAK
Mvan_1506|M.vanbaalenii_PYR-1 MPQPQQLPGPNADIWDWQIQGVCRGVDSSMFFHPDGERGRARAQREMRAK
MSMEG_1597|M.smegmatis_MC2_155 MPQPQQLPGPNADIWDWQMRGLCRGVDSSMFFHPDGERGRARAQREMRAK
TH_1682|M.thermoresistible__bu MPQPQQLPGPNADMWDWQMKGVCRGVDSSVFFHPDGERGRARAEREMRAK
MAB_3726|M.abscessus_ATCC_1997 MPQPQQLPGPNADIWDWQMKGVCRGVDSSVFFHPDGERGRARAQREMKAK
::*:***:**::************ :** :**
Mb3450|M.bovis_AF2122/97 EMCRRCPVIEACRSHALEVGEPYGVWGGLSESERDLLLKGTMGRTRGIRR
Rv3416|M.tuberculosis_H37Rv EMCRRCPVIEACRSHALEVGEPYGVWGGLSESERDLLLKGTMGRTRGIRR
MMAR_1132|M.marinum_M EMCRRCPVIEECRSHALDVGEPYGVWGGLSESERDLLLKGGIGRTRGIRR
MUL_0895|M.ulcerans_Agy99 EMCRRCPVIEECRSHALDVGEPHGVWGGLSESERDLLLKGGIGRTRGIRR
MAV_4361|M.avium_104 EMCRQCPVIQECRSHALEVGEPYGVWGGLSESERDLLLKGEIGRGRGIRR
MLBr_00382|M.leprae_Br4923 EMCRRCPVIEECRAHALDVGEPYGVWGGLSESERDLLLKGDLARSRSIPR
Mflv_4914|M.gilvum_PYR-GCK EMCRRCPVIAQCRSHALAVGEPYGIWGGLSESERELLLK------RGIRR
Mvan_1506|M.vanbaalenii_PYR-1 EMCRRCPVITQCRSHALAVGEPYGIWGGLSESERELLLK------RGIRR
MSMEG_1597|M.smegmatis_MC2_155 EMCRSCPVIAQCRSHALAVGEPYGIWGGLSESERELLLK------RGIRR
TH_1682|M.thermoresistible__bu ALCRQCPVIVQCRTHALSVGEPYGIWGGLGESEREMLLK-----RGGFRR
MAB_3726|M.abscessus_ATCC_1997 EMCRACPVLVQCRAHALAVAEPYGIWGGLSESERELILR-----RG-VRR
:** ***: **:*** *.**:*:****.****:::*: . *
Mb3450|M.bovis_AF2122/97 TA
Rv3416|M.tuberculosis_H37Rv TA
MMAR_1132|M.marinum_M TA
MUL_0895|M.ulcerans_Agy99 TA
MAV_4361|M.avium_104 SA
MLBr_00382|M.leprae_Br4923 SA
Mflv_4914|M.gilvum_PYR-GCK TA
Mvan_1506|M.vanbaalenii_PYR-1 SA
MSMEG_1597|M.smegmatis_MC2_155 SA
TH_1682|M.thermoresistible__bu SA
MAB_3726|M.abscessus_ATCC_1997 TA
:*