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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1568 | rpmE | - | 100% (119) | PROBABLE 50S RIBOSOMAL PROTEIN L31 RPME |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1330 | rpmE | 2e-31 | 85.29% (68) | 50S ribosomal protein L31 |
| M. gilvum PYR-GCK | Mflv_2306 | rpmE | 2e-33 | 89.86% (69) | ribosomal protein L31 |
| M. tuberculosis H37Rv | Rv1298 | rpmE | 2e-31 | 85.29% (68) | 50S ribosomal protein L31 |
| M. leprae Br4923 | MLBr_01133 | rpmE | 7e-32 | 83.82% (68) | 50S ribosomal protein L31 |
| M. abscessus ATCC 19977 | MAB_1441 | rpmE.1 | 2e-32 | 88.24% (68) | 50S ribosomal protein L31 |
| M. marinum M | MMAR_4099 | rpmE | 1e-31 | 75.64% (78) | 50S ribosomal protein L31 RpmE |
| M. avium 104 | MAV_1515 | rpmE | 3e-32 | 76.92% (78) | 50S ribosomal protein L31 |
| M. smegmatis MC2 155 | MSMEG_4951 | rpmE | 9e-33 | 86.96% (69) | ribosomal protein L31 |
| M. ulcerans Agy99 | MUL_3966 | rpmE | 9e-32 | 75.64% (78) | 50S ribosomal protein L31 |
| M. vanbaalenii PYR-1 | Mvan_4340 | rpmE | 8e-34 | 92.65% (68) | ribosomal protein L31 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1330|M.bovis_AF2122/97 --------------------------------MKSDIHPAYEETTVVCGC
Rv1298|M.tuberculosis_H37Rv --------------------------------MKSDIHPAYEETTVVCGC
MLBr_01133|M.leprae_Br4923 --------------------------------MKANIHPAYAETTVVCGC
MAV_1515|M.avium_104 --------------------------------MKADIHPTYAETTVLCGC
MMAR_4099|M.marinum_M --------------------------------MKSDIHPTYEETTVVCGC
MUL_3966|M.ulcerans_Agy99 --------------------------------MKSDIHPTYEETTVVCGC
MAB_1441|M.abscessus_ATCC_1997 --------------------------------MKSGIHPNYVETNVVCGC
TH_1568|M.thermoresistible__bu MDRRTPRFRFTSHRRRASGLNWRPGTTIEEDIMKSGIHPDYVETTVLCGC
Mflv_2306|M.gilvum_PYR-GCK --------------------------------MKSGIHPDYVETTVLCGC
Mvan_4340|M.vanbaalenii_PYR-1 --------------------------------MKSGIHPDYVETTVLCGC
MSMEG_4951|M.smegmatis_MC2_155 --------------------------------MKTGIHPEYVDTTVQCGC
**:.*** * :*.* ***
Mb1330|M.bovis_AF2122/97 GNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVARFEKRYGKR
Rv1298|M.tuberculosis_H37Rv GNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVARFEKRYGKR
MLBr_01133|M.leprae_Br4923 GNTFQTRSTKPGGRIVVEVCSQCHPFYTGKQKILDSGGRVARFEKRYGKR
MAV_1515|M.avium_104 GNTFQTRSTKDGGRIVVEVCSQCHPFYTGKQKILDSGGRVARFEKRYGKR
MMAR_4099|M.marinum_M GNTFQTRSTKQGGRIVAEVCSQCHPFYTGKQKILDSGGRVARFERRYGKR
MUL_3966|M.ulcerans_Agy99 GNTFQTRSTKQGGRIVAEVCSQCHPFYTGKQKILDSGGRVARFERRYGKR
MAB_1441|M.abscessus_ATCC_1997 GNTFTTRSTKESGHIVVEVCSQCHPFYTGKQKILDSGGRVARFEARYGKR
TH_1568|M.thermoresistible__bu GNSFKTRSTKTSGQIVVEVCSQCHPFYTGKQKILDSGGRVARFERRYGKR
Mflv_2306|M.gilvum_PYR-GCK GASFTTRSTKKSGNITVEVCSQCHPFYTGKQKILDSGGRVARFEKRYGKR
Mvan_4340|M.vanbaalenii_PYR-1 GASFTTRSTKQSGQITVEVCSQCHPFYTGKQKILDSGGRVARFEKRYGKR
MSMEG_4951|M.smegmatis_MC2_155 GHSFTTRSTKQSGTIVVEVCSQCHPFYTGKQKILDSGGRVARFEKRYGKR
* :* ***** .* *..*************************** *****
Mb1330|M.bovis_AF2122/97 KVGADKAVSTGK------
Rv1298|M.tuberculosis_H37Rv KVGADKAVSTGK------
MLBr_01133|M.leprae_Br4923 KVGVDQVAAYPEQNNK--
MAV_1515|M.avium_104 KAGAEKAESADK------
MMAR_4099|M.marinum_M KAGADKDQAAADK-----
MUL_3966|M.ulcerans_Agy99 KAGADKDQAAADK-----
MAB_1441|M.abscessus_ATCC_1997 KAAADK------------
TH_1568|M.thermoresistible__bu NNKGNSNENAKTENKTDK
Mflv_2306|M.gilvum_PYR-GCK SK----------------
Mvan_4340|M.vanbaalenii_PYR-1 KTTADK------------
MSMEG_4951|M.smegmatis_MC2_155 NKAAADK-----------
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