For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1078 | - | - | 100% (157) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3151 | - | 8e-54 | 65.07% (146) | hypothetical protein Mflv_3151 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_2277 | - | 6e-46 | 59.46% (148) | hypothetical protein MAV_2277 |
| M. smegmatis MC2 155 | MSMEG_5401 | - | 1e-55 | 67.61% (142) | hypothetical protein MSMEG_5401 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3377 | - | 1e-52 | 66.90% (142) | hypothetical protein Mvan_3377 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3151|M.gilvum_PYR-GCK -MATEPDEITSSPIVRRETSASRQRVWSVLADGWTYSQWVVGNSRMRAVD
Mvan_3377|M.vanbaalenii_PYR-1 -MASEPEEITSSPLVRRETSASRQQVWAVIADGWTYSQWVVGNSRMRAVD
MSMEG_5401|M.smegmatis_MC2_155 MEESSPAAVDSSLTVKRDTTATRQQVWDVIADGWTYSQWVVGNTRMRAVD
TH_1078|M.thermoresistible__bu ------------VTVKRDVPASRRQLWEVIADGWTYSQWVVGNSRMRAVD
MAV_2277|M.avium_104 -----------MITATREVAAPCERVWEVIAQGWTYTQWVVGNSRTRAVD
. *:..*. .::* *:*:****:******:* ****
Mflv_3151|M.gilvum_PYR-GCK PDWPQPGSTIHHSIGVWPAVINDSTVVESCTPERELVLIANGRPLGKARI
Mvan_3377|M.vanbaalenii_PYR-1 PNWPQPGSTLHHSIGVWPAVINDSTVVESCTPEEELVLIANGRPFGKARI
MSMEG_5401|M.smegmatis_MC2_155 PNWPAPGSTIHHTIGVWPVVLNDETVVESCTPGEELILHAKGRPFGKARI
TH_1078|M.thermoresistible__bu PDWPAPGSTIRHSIGLWPLVINDVTVVEECVPLERIVLHAKGGPMGGARI
MAV_2277|M.avium_104 ADWPNPGASIRHSVGVWPLVINDATVVERSDPPHELVLRAHLGPLGAARI
.:** **::::*::*:** *:** **** . * ..::* *: *:* ***
Mflv_3151|M.gilvum_PYR-GCK TLRLHDLDGGGCLIEMAEVPVSVPMKWLPDSLALAGVFPRNRETTWRLAA
Mvan_3377|M.vanbaalenii_PYR-1 TLRLHDLDGGGCVIEMAEVPVSPPLSWLPRSAALAAVFPRNRETTWRLAA
MSMEG_5401|M.smegmatis_MC2_155 VMRLHDLPDGGCRVEMAEVPIGGPLDWVPRRLALLAAFPRNRECTARLVA
TH_1078|M.thermoresistible__bu ELRLSDNPDGGCHLEMDEYPVSGPGKFIPNPLAQLAIWPRNRETTWRLAA
MAV_2277|M.avium_104 TLRLHATRVG-CRVEMIEVPARGSVRLIPNQLALLAVYPRNQECLLRLAA
:** * * :** * * . :* * . :***:* **.*
Mflv_3151|M.gilvum_PYR-GCK IAERRTDDDVVN------
Mvan_3377|M.vanbaalenii_PYR-1 MAERRTSEDT--------
MSMEG_5401|M.smegmatis_MC2_155 LAERRPEPE---------
TH_1078|M.thermoresistible__bu LAERLTPNQIDTREQSRR
MAV_2277|M.avium_104 LAERQEPNQVT-------
:*** :