For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1024 | lpqJ | - | 100% (190) | PROBABLE LIPOPROTEIN LPQJ |
| M. thermoresistible (build 8) | TH_1385 | - | 5e-06 | 38.16% (76) | POSSIBLE CONSERVED PROLINE RICH MEMBRANE PROTEIN |
| M. thermoresistible (build 8) | TH_2748 | - | 7e-05 | 35.53% (76) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0351c | lpqJ | 2e-57 | 60.22% (186) | lipoprotein LpqJ |
| M. gilvum PYR-GCK | Mflv_0264 | - | 2e-59 | 62.22% (180) | putative lipoprotein LpqJ |
| M. tuberculosis H37Rv | Rv0344c | lpqJ | 2e-57 | 60.22% (186) | lipoprotein LpqJ |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1827c | - | 3e-24 | 37.84% (185) | bacteriophage protein |
| M. marinum M | MMAR_0620 | lpqJ | 7e-53 | 58.70% (184) | lipoprotein, LpqJ |
| M. avium 104 | MAV_4811 | - | 6e-51 | 58.70% (184) | LpqJ protein |
| M. smegmatis MC2 155 | MSMEG_0704 | - | 9e-58 | 59.89% (177) | LpqJ protein |
| M. ulcerans Agy99 | MUL_0585 | lpqJ | 1e-53 | 58.79% (182) | lipoprotein, LpqJ |
| M. vanbaalenii PYR-1 | Mvan_0631 | - | 2e-60 | 62.29% (175) | putative lipoprotein LpqJ |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0351c|M.bovis_AF2122/97 -------------------------------MRLSLIAR--------GMA
Rv0344c|M.tuberculosis_H37Rv -------------------------------MRLSLIAR--------GMA
MMAR_0620|M.marinum_M -------------------------------MRLPQKTRW-------GLL
MUL_0585|M.ulcerans_Agy99 -------------------------------MRLPQKTRW-------GLL
MAV_4811|M.avium_104 -------------------------------MRLSENARRSLAGGALLLV
MSMEG_0704|M.smegmatis_MC2_155 -------------------------------MKVRLLLG-----------
TH_1024|M.thermoresistible__bu ------------------------------VRRFVGPVGAVVLGVTALIA
Mflv_0264|M.gilvum_PYR-GCK -------------------------------MRTRL-----------MAA
Mvan_0631|M.vanbaalenii_PYR-1 -------------MCWVLPLEAASHSRHSHPMLRRLDGMR-----PQVAL
MAB_1827c|M.abscessus_ATCC_199 MSAEDDEDEQEPTRASPTALAETGVVEITPAAWSDSDEIDDIDPYEDPVR
Mb0351c|M.bovis_AF2122/97 ALLAATALVAGCNTTIDGRPVASPGSGPTEPTFPTPRPTTAPP--GTTAP
Rv0344c|M.tuberculosis_H37Rv ALLAATALVAGCNTTIDGRPVASPGSGPTEPTFPTPRPTTAPP--GTTAP
MMAR_0620|M.marinum_M ALSAAAVLAAGCDATIDGKPIATPGAGPTEPSFPTRRPTTSPPPPTSTSP
MUL_0585|M.ulcerans_Agy99 ALSAAAVLAAGCDATIDGKPIATPGAGPTEPSFPTRRPTTSPP--TSTSP
MAV_4811|M.avium_104 VLPGGGGLVSGCSTVIGGRPVASPGAGPTEPSFPTPR--STPP--SATAA
MSMEG_0704|M.smegmatis_MC2_155 CLLSVGGLLVGCHSAIEGKPVTK-AITPIEPNFPTPRPTRSSP-----AP
TH_1024|M.thermoresistible__bu VLIAVG--VAGCSRTTEGSPVGTGPTGE-EPTFPTPRPTRTTP--PTTTP
Mflv_0264|M.gilvum_PYR-GCK AVLASATVLAGCQTVIDGTATRTPDSSFTEPEFPTPRPSRPTTAPPSTSA
Mvan_0631|M.vanbaalenii_PYR-1 AALACAVALVGCQSSIEGTATRTPDS-FSEPDFPTPRPSRPTTAPP-TTG
MAB_1827c|M.abscessus_ATCC_199 RNWLISGAIFAATAAVAGLAAGGAFVFLRQERGKTPVTTSTVLIASPPAP
.. * . : * . :
Mb0351c|M.bovis_AF2122/97 TLPTT--PVSPTAPAGAIPLPPDSNGYVFIETKSGMTRCQINRDSVGCEA
Rv0344c|M.tuberculosis_H37Rv TLPTT--PVSPTAPAGAIPLPPDSNGYVFIETKSGMTRCQINRDSVGCEA
MMAR_0620|M.marinum_M SQPTS--PASPTSPAGAIPLPPDDNGYVFIETKSGQTRCQINHDSVGCEA
MUL_0585|M.ulcerans_Agy99 SQPTS--PASPTSPAGAIPLPPDDNGYVFIETKSGQTRCQINHDSVGCEA
MAV_4811|M.avium_104 PAPTALPPPSPSAPAGAIPLPPDQNGYVFIETKSGSTRCQINKDTVGCEA
MSMEG_0704|M.smegmatis_MC2_155 SSTVA-APPSAKPPTGATPLQP-QNGYVFIETKSGRTRCQLSKQDVGCES
TH_1024|M.thermoresistible__bu PPDTG---TATPSPRGEV-LRP-QNGYVFIETKSGQTRCQLSADEVGCEA
Mflv_0264|M.gilvum_PYR-GCK PTPTP---TRPRPPGGEV-LRP-QNGYVFIQTKSGKTRCQLDEQEVGCES
Mvan_0631|M.vanbaalenii_PYR-1 PAPS----TRTGPPAGEV-LAP-QNGYVFIQTRTGKTRCQLDEQEVGCES
MAB_1827c|M.abscessus_ATCC_199 TSAVVLPPPPTQSRPPTPIELSATGDSVYVSTKSGKTACQVTVNTVSCIV
. . . . .. *::.*::* * **: : *.*
Mb0351c|M.bovis_AF2122/97 PFTN-SPLRDGEHANGIHITAGGSVQWVLGNLGAIPTVSIDY-RTYEAQG
Rv0344c|M.tuberculosis_H37Rv PFTN-SPLRDGEHANGIHITAGGSVQWVLGNLGAIPTVSIDY-RTYEAQG
MMAR_0620|M.marinum_M PFTN-SPIKDGEHANGVHITSAGNVQWVLGNLGAIPTVTIDY-KTYDAQG
MUL_0585|M.ulcerans_Agy99 PFTN-SPIKDGEHANGVHITSAGNVQWVLGNLGAIPTVTIDY-KTYDAQG
MAV_4811|M.avium_104 PFTN-SPLQDGEHANGVSINAGGKVQWVLGNLGAIPTVKLDY-RTYSAQG
MSMEG_0704|M.smegmatis_MC2_155 DFAN-APVVDGLPANGVQLSASGKMRWIVGNLGAIPAVTLDY-KRYSALG
TH_1024|M.thermoresistible__bu PFHD-PPEVDGVPANGVNITADGAVRWVVGNLGAIPAVTLDY-RTYSALG
Mflv_0264|M.gilvum_PYR-GCK AFTD-APVIDGMPANGVRLSADGELSWVVGNLGAIPAVTLDY-RTYSALG
Mvan_0631|M.vanbaalenii_PYR-1 AFTN-APEIDGLPANGVRLSADGDLSWVLGNLGAIPAVTLDY-RTYSAVG
MAB_1827c|M.abscessus_ATCC_199 RFVGRTPIRYGVPTNVVMITSGGIMDWTVGDGGQLQTHTLNYGTLYHALG
* . .* * :* : :.: * : * :*: * : : .::* * * *
Mb0351c|M.bovis_AF2122/97 WTIDATTDGTRFTNNRTGHGMFVSIEKVDTF
Rv0344c|M.tuberculosis_H37Rv WTIDATTDGTRFTNNRTGHGMFVSIEKVDTF
MMAR_0620|M.marinum_M WIITATTDGTRFQNNGTGHGMFVSIDKVETF
MUL_0585|M.ulcerans_Agy99 WIITATTDGTRFQNNGTGHGMFVSIDKVETF
MAV_4811|M.avium_104 WTIVANADGTRFTNDQTKHGMFVSIEKVNTF
MSMEG_0704|M.smegmatis_MC2_155 WTIDASSDGTRFTNDGTGHGMVVAVEGVQVF
TH_1024|M.thermoresistible__bu WTIEATRDGTRFTNDRTGHGMFVAVEGVETF
Mflv_0264|M.gilvum_PYR-GCK WTIEATESGTRFTNDATGRGMVVRIEGVESF
Mvan_0631|M.vanbaalenii_PYR-1 WTIEADENGTRFTNDGTGRGMVISVEGVESF
MAB_1827c|M.abscessus_ATCC_199 WTITPTSEGTTFTNDATGRGMSVNVDGARAF
* * . .** * *: * :** : :: . *