For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0814 | - | 100% (145) | PROBABLE TRANSMEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1259c | - | 5e-53 | 63.89% (144) | hypothetical protein Mb1259c |
| M. gilvum PYR-GCK | Mflv_0150 | - | 3e-64 | 77.78% (144) | membrane-flanked domain-containing protein |
| M. tuberculosis H37Rv | Rv1227c | - | 5e-53 | 63.89% (144) | hypothetical protein Rv1227c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1269 | - | 6e-18 | 41.74% (115) | hypothetical protein MAB_1269 |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0864 | - | 2e-62 | 76.19% (147) | membrane flanked domain-containing protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0754 | - | 5e-63 | 75.00% (144) | membrane-flanked domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1259c|M.bovis_AF2122/97 MDHARNVPSATGPQRNHLALAEPAHRPSSQAPVMWALSASLGWILPVIAQ
Rv1227c|M.tuberculosis_H37Rv MDHARNVPSATGPQRNHLALAEPAHRPSSQAPVMWALSASLGWILPVIAQ
TH_0814|M.thermoresistible__bu ---------------------------------VWALGAAVPWSMIIVGQ
MSMEG_0864|M.smegmatis_MC2_155 --MDREGEEYSGSTASGLVLLDPSNPPSRKAPLAWAMGAAIPWSMLVFGQ
Mflv_0150|M.gilvum_PYR-GCK -----------------MHLADPAHPPSRKAPLVWALGAAAPWSIAIVAQ
Mvan_0754|M.vanbaalenii_PYR-1 -----------------MHLAEPAYPPSRKAPLVWAIGAAIPWMFAVAAQ
MAB_1269|M.abscessus_ATCC_1997 -------------MATPMLFVAPANRLGPNARTLWIVQGIANYLVVIAFI
* : . : . :
Mb1259c|M.bovis_AF2122/97 LVWWAVHPQPPWPHLAAAALTAVAMVVHIGVVPLWRYRVHRWEISPQ---
Rv1227c|M.tuberculosis_H37Rv LVWWAVHPQPPWPHLAAAALTAVAMVVHIGVVPLWRYRVHRWEISPQ---
TH_0814|M.thermoresistible__bu LVWWVADGRMPWLHALAAVATVFGVLAFVVVAPLWRYRVHRWDIDER---
MSMEG_0864|M.smegmatis_MC2_155 LVWLLFDRRMLWLHGLAAVATAAGIVLFVVIVPLWRYRVHRWDISVDTAT
Mflv_0150|M.gilvum_PYR-GCK VLWFLFDGRLPWLHILAALGTVVGVTVSVVVAPLWRYRVHRWEVDPT---
Mvan_0754|M.vanbaalenii_PYR-1 AVWFMVDGRVPWLHMLVAAGTVVGAVVSVVVAPLWRYRVHRWDLDAT---
MAB_1269|M.abscessus_ATCC_1997 VGVGFFAPGRFWWWSLAAVVGILAVP-YVIARSYLRLRVHRWEFNEV---
* .* . : . * *****:..
Mb1259c|M.bovis_AF2122/97 -AVFTRTGWLVQERRITPISRVQTVDTYRGPMDRLFGLANVTVTTASSAG
Rv1227c|M.tuberculosis_H37Rv -AVFTRTGWLVQERRITPISRVQTVDTYRGPMDRLFGLANVTVTTASSAG
TH_0814|M.thermoresistible__bu -AVYTRTGWVTQERRIAPISRVQTVDTYRGPLDQLFGLSNVTVTTASSAG
MSMEG_0864|M.smegmatis_MC2_155 PAVYTRTGWLVQERRIAPISRVQTVDTYRGPLDRLFGLANVTVTTASSAG
Mflv_0150|M.gilvum_PYR-GCK -AVYTRSGWLVQERRIAPISRVQTVDTYRGPLDRLFGLANVTVTTASSAG
Mvan_0754|M.vanbaalenii_PYR-1 -AVYTRSGWLVQERRIAPISRVQTVDTYRGPLDRLFGLANVTVTTASSAG
MAB_1269|M.abscessus_ATCC_1997 -ALYVQTGWITHVRTIIPIQRIKKITEQRGLLQRKFGLSSLTISAGSGAG
*::.::**:.: * * **.*::.: ** ::: ***:.:*:::.*.**
Mb1259c|M.bovis_AF2122/97 AVHIEALDTDVADRVVAQLTDIAALRGEDAT
Rv1227c|M.tuberculosis_H37Rv AVHIEALDTDVADRVVAQLTDIAALRGEDAT
TH_0814|M.thermoresistible__bu AVRIVALDADVADRIVAYLTDVAAIGSEDAT
MSMEG_0864|M.smegmatis_MC2_155 AVRIVALDVDVADRVVALLTDIAAIGEQDAT
Mflv_0150|M.gilvum_PYR-GCK AVRIVALDLDVADRVVAQLTDIAALGQEDAT
Mvan_0754|M.vanbaalenii_PYR-1 AVRIVALDVDVADRVVARLTDIAALGAEDAT
MAB_1269|M.abscessus_ATCC_1997 TINIDNIDHLVAAEIANKSAIATAPDTDE--
::.* :* ** .:. : :* ::