For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0659 | - | - | 100% (113) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1204 | - | 2e-27 | 47.27% (110) | hypothetical protein Mb1204 |
| M. gilvum PYR-GCK | Mflv_2166 | - | 2e-27 | 55.88% (102) | hypothetical protein Mflv_2166 |
| M. tuberculosis H37Rv | Rv1171 | - | 2e-27 | 47.27% (110) | hypothetical protein Rv1171 |
| M. leprae Br4923 | MLBr_01494 | - | 9e-26 | 47.71% (109) | hypothetical protein MLBr_01494 |
| M. abscessus ATCC 19977 | MAB_1317 | - | 7e-16 | 35.45% (110) | hypothetical protein MAB_1317 |
| M. marinum M | MMAR_4281 | - | 4e-30 | 53.64% (110) | hypothetical protein MMAR_4281 |
| M. avium 104 | MAV_1311 | - | 4e-30 | 53.64% (110) | hypothetical protein MAV_1311 |
| M. smegmatis MC2 155 | MSMEG_5128 | - | 4e-31 | 52.73% (110) | hypothetical protein MSMEG_5128 |
| M. ulcerans Agy99 | MUL_1018 | - | 1e-29 | 53.21% (109) | hypothetical protein MUL_1018 |
| M. vanbaalenii PYR-1 | Mvan_4534 | - | 7e-28 | 50.46% (109) | hypothetical protein Mvan_4534 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2166|M.gilvum_PYR-GCK MGRRLPRLAARQHPDLTTAVR---------PAPGRLRVPLLILLGLDGVL
Mvan_4534|M.vanbaalenii_PYR-1 -------------------------------MSDRLRVLLLALLGLDGVL
TH_0659|M.thermoresistible__bu ---------------------------------------VLGVLAVNGIL
MLBr_01494|M.leprae_Br4923 -----------------------------------MRIVVLVLFAADGVL
MAV_1311|M.avium_104 MGYRLDTLQHRQRSDLTETKPRVASGEDSGATDPAIRFVVLALLAVDGVL
Mb1204|M.bovis_AF2122/97 MGHRVDTLSDRQRANLTT-----------GATDRAIRLVVLALLTVDGVV
Rv1171|M.tuberculosis_H37Rv MGHRVDTLSDRQRANLTT-----------GATDRAIRLVVLALLTVDGVV
MMAR_4281|M.marinum_M ---------------------------------------MLTLLAVDGVL
MUL_1018|M.ulcerans_Agy99 ---------------------------------------MLTLLAVDGVL
MSMEG_5128|M.smegmatis_MC2_155 MGRRLAGGAARQHPDLTS-----------------RAGIVLTLLAIDGVI
MAB_1317|M.abscessus_ATCC_1997 MGRRLAGSSARFDPDLGA-------------LNVFVRGFVMAALIFDGVI
:: : :*::
Mflv_2166|M.gilvum_PYR-GCK SALLAVFFLPLRLGPVPFPISALLSGILNAALVWAALQLTSTPRLGALPL
Mvan_4534|M.vanbaalenii_PYR-1 SALMAVFFLPLRLGPVPLPISALLSGALNLSLVWAGLQWTSVPRLAALPL
TH_0659|M.thermoresistible__bu SAILAVFFLPLRIGVVPFPVSAVLSGALNVALVWTALLWTDSVRLAALPM
MLBr_01494|M.leprae_Br4923 SAVVGAMLMPLYIGSVPFPISGLISGLVNAVLVWAARLWTRSPWLVALPL
MAV_1311|M.avium_104 SALAGALLLPLYIGTVPFPISGLISGLLNAALVWAAGRWTRSPRLVALPL
Mb1204|M.bovis_AF2122/97 SALAGALLMPWYIGSAPFPISALISGLVNAALVWAAARWTTSSRVAALPL
Rv1171|M.tuberculosis_H37Rv SALAGALLMPWYIGSAPFPISALISGLVNAALVWAAARWTTSSRVAALPL
MMAR_4281|M.marinum_M SALMGALLLPTYLGSVPFPISALISGLVNAALVWAAERWTTSHRVAALPL
MUL_1018|M.ulcerans_Agy99 SALMGALLLPTYLGSVPFPISALISGLVNAALVWAAERWTTSHRVAALPL
MSMEG_5128|M.smegmatis_MC2_155 SAVVGALFLPIYIGTIPFPISAVLTGAVNLALVWAAAHWADSLLLAGLPL
MAB_1317|M.abscessus_ATCC_1997 SAILGAALLNTRFGGVLVPLGLIIAAVLNVLLVWSALQWAPTPRWVGASL
**: .. :: :* .*:. :::. :* ***:. : . .:
Mflv_2166|M.gilvum_PYR-GCK WTWLATLLVLMTITPGDDIVFGGSGLMEFGPVLLVALGAVPAAWLVMKAG
Mvan_4534|M.vanbaalenii_PYR-1 WTWLATVLLCMVFKPGDDIVFGGVGIMEFGPVLLVALGALPAAWLLMRHP
TH_0659|M.thermoresistible__bu WTWLAAVGVFTLGGPGGNIMFGSSGLGALALLILLVCGMVPPTVVLKRRT
MLBr_01494|M.leprae_Br4923 WVWLLTVGLLSLGGPGVDVVSG-QSVMASGALWLILLGVSPPACVLWRCN
MAV_1311|M.avium_104 WTWLLTVAVISMGGPADDVILGGRGVMAYGALLLLVLGVAPPVWVLWRRG
Mb1204|M.bovis_AF2122/97 WAWLLTVAAMSFGGPGDDVILGGQGLLVYGALVFVVAGAVPPAWVLWRRR
Rv1171|M.tuberculosis_H37Rv WAWLLTVAAMSFGGPGDDVILGGQGLLVYGALVFVVAGAVPPAWVLWRRR
MMAR_4281|M.marinum_M WTWLATVAVLSFGGPGDDVVLGGRGVMAYGALILIVLGALPPGWVLWRRQ
MUL_1018|M.ulcerans_Agy99 WTWLATVAVLSFGGPGDDVVLGGRGVMAYGALILIVLGALPPGWVLWRCQ
MSMEG_5128|M.smegmatis_MC2_155 WTFLAMVVVMTLGGPGGDLIFAGTGLYAFGAMIFLAVGSLPAVWFLRRRF
MAB_1317|M.abscessus_ATCC_1997 WAFVATAMVLLFGGPGGDVVFT-----GFWPVLLIVIGVLPAAYLLRRRI
*.:: *. ::: : :: * *. .: :
Mflv_2166|M.gilvum_PYR-GCK DQRVPTRAPSATRTR
Mvan_4534|M.vanbaalenii_PYR-1 P---AAGADPRTGAR
TH_0659|M.thermoresistible__bu A--------------
MLBr_01494|M.leprae_Br4923 RYG------------
MAV_1311|M.avium_104 RGG------------
Mb1204|M.bovis_AF2122/97 VQADGSG--------
Rv1171|M.tuberculosis_H37Rv VQADGSG--------
MMAR_4281|M.marinum_M VRDRPNGA-------
MUL_1018|M.ulcerans_Agy99 VRDRPNGA-------
MSMEG_5128|M.smegmatis_MC2_155 H--------------
MAB_1317|M.abscessus_ATCC_1997 D--------------