For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0533 | - | - | 100% (153) | conserved hypothetical protein |
| M. thermoresistible (build 8) | TH_1084 | - | 2e-17 | 36.69% (139) | CONSERVED HYPOTHETICAL PROTEIN |
| M. thermoresistible (build 8) | TH_4365 | - | 6e-14 | 43.14% (102) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1654c | - | 4e-16 | 35.66% (129) | hypothetical protein Mb1654c |
| M. gilvum PYR-GCK | Mflv_2520 | - | 8e-62 | 76.87% (134) | hypothetical protein Mflv_2520 |
| M. tuberculosis H37Rv | Rv1628c | - | 4e-16 | 35.66% (129) | hypothetical protein Rv1628c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2618 | - | 6e-15 | 30.94% (139) | hypothetical protein MAB_2618 |
| M. marinum M | MMAR_2431 | - | 2e-18 | 37.96% (137) | hypothetical protein MMAR_2431 |
| M. avium 104 | MAV_0988 | - | 6e-64 | 78.68% (136) | hypothetical protein MAV_0988 |
| M. smegmatis MC2 155 | MSMEG_4777 | - | 6e-58 | 71.01% (138) | hypothetical protein MSMEG_4777 |
| M. ulcerans Agy99 | MUL_1610 | - | 1e-18 | 37.96% (137) | hypothetical protein MUL_1610 |
| M. vanbaalenii PYR-1 | Mvan_4138 | - | 4e-61 | 76.87% (134) | hypothetical protein Mvan_4138 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2520|M.gilvum_PYR-GCK MVNPVSSTQRALAPEISTWPDDNPQLIGSSCGSCGATTFP-VQQRCPK--
Mvan_4138|M.vanbaalenii_PYR-1 MVNCVSTTQRALAPEISTWPADDPQLIGSSCGTCGATTFP-VQQRCPK--
MAV_0988|M.avium_104 -------MQKALAPEISTWPDESPQLIGSRCGSCAATTFP-VQQWCPR--
MSMEG_4777|M.smegmatis_MC2_155 -----MSTQKALAPEISTWPDENPQLIGSRCDTCGSYVFP-VQDHCPR--
TH_0533|M.thermoresistible__bu -MNEGRLMARALAPEISTWPEENPQLIGSRCGSCSAVTFP-RQDRCPK--
Mb1654c|M.bovis_AF2122/97 -MPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPA
Rv1628c|M.tuberculosis_H37Rv -MPEVTREEPAIDGWFTTDKAGNPHLLGGKCPQCGTYVFPPRADNCPNPA
MMAR_2431|M.marinum_M -MPEVTSQQPAVAGWFTTDEAGSPHLIGSKCPPCGTYVFPPRENNCPNPA
MUL_1610|M.ulcerans_Agy99 -MPEVTSQQPAVAGWFTTDEAGSPHLIGSKCPPCGTYVFPPRENNCPNPA
MAB_2618|M.abscessus_ATCC_1997 -MP--TDQAPAIDGWFDTDESGRPHLIGGKCTHCATIVFPPRANNCPNPS
*: : * *:*:*. * *.: .** : **.
Mflv_2520|M.gilvum_PYR-GCK CSGGEMSDVLLPRRGTLVAWTTQGFPPGAPYMGPTGKDFVPFGVGLVQLE
Mvan_4138|M.vanbaalenii_PYR-1 CSGGEMSEVLLPRRGTLIAWTTQGFPPGAPYKGPTGKDFVPFGVGLVQLD
MAV_0988|M.avium_104 CSSGEMSEVLLPRRGTLVAWTTQGFPPGAPYAGPTGKDFVPFGVGLVQLG
MSMEG_4777|M.smegmatis_MC2_155 CSSADTSEVLLPRRGTVVAWTTQGFPPGAPYAGPTGKDFVPFGVGLVELA
TH_0533|M.thermoresistible__bu CSAAEMSELLLPREGTLVAWTTQGFPPGPPYAGPTGDDFVPFGVGLVQLG
Mb1654c|M.bovis_AF2122/97 CGSDTLESVGLSTRGKLWSYTENRYAPPPPYPAPD--PFEPFAVAAVELA
Rv1628c|M.tuberculosis_H37Rv CGSDTLESVGLSTRGKLWSYTENRYAPPPPYPAPD--PFEPFAVAAVELA
MMAR_2431|M.marinum_M CANDKLESVALSRRGKLWSYTENRYAPPPPYPSPD--PFEPFAVAAVELA
MUL_1610|M.ulcerans_Agy99 CANDKLESVALSRRGKLWSYTENRYAPPPPYPSPD--PFEPFAVAAVELA
MAB_2618|M.abscessus_ATCC_1997 CDSDVLDQVPLSSRGTVWSYTENQYAPPPPYPASD--PYEPYAIAAVELS
* ..: *. .*.: ::* : :.* .** .. : *:.:. *:*
Mflv_2520|M.gilvum_PYR-GCK D----VIRVEGRLTENDPAKLQFGQQVELTMIPFTSDEDGNEVVTFAFQP
Mvan_4138|M.vanbaalenii_PYR-1 D----VIRVEGRLTENDPAKLKFGEQVELTMLPFTTDEDGTEVVTFAFRP
MAV_0988|M.avium_104 D----VIRVEGRLTENDPAKLKFGQEVELTMVPLTTDDDGNEVLTFAFQP
MSMEG_4777|M.smegmatis_MC2_155 DETGPVIRVEGRLTENDPDKLEFGQQVELTMIPFTTDDEGNEVVTFAFQP
TH_0533|M.thermoresistible__bu D----TVRVEGRLTENDPAELEFGMPVELTMVPLTTDENGEDIMTFAFRP
Mb1654c|M.bovis_AF2122/97 DEG--LIVLGKVVDGTLAADLKVGMEMELTTMPLFADDDGVQRIVYAWRI
Rv1628c|M.tuberculosis_H37Rv DEG--LIVLGKVVDGTLAADLKVGMEMELTTMPLFADDDGVQRIVYAWRI
MMAR_2431|M.marinum_M DEG--LIVLGKVVEGTLAADLKIGMEMELTTMPLFTDEDGVERIVYAWRI
MUL_1610|M.ulcerans_Agy99 DEG--LIVLGKVVEGTLAADLKIGMEMELTTMPLFTDEDGVERIVYAWRI
MAB_2618|M.abscessus_ATCC_1997 AEG--IIVLGKVVTGTGAADLRVGQAMELALEPLYTDDEGVERLVYAWKK
: : : . . .*..* :**: *: :*::* : :.:*::
Mflv_2520|M.gilvum_PYR-GCK VDN---------------
Mvan_4138|M.vanbaalenii_PYR-1 VEN---------------
MAV_0988|M.avium_104 V-----------------
MSMEG_4777|M.smegmatis_MC2_155 V-----------------
TH_0533|M.thermoresistible__bu TGRTEEGTTA--------
Mb1654c|M.bovis_AF2122/97 PSRAGDDAERSDAEERRR
Rv1628c|M.tuberculosis_H37Rv PSRAGDDAERSDAEERRR
MMAR_2431|M.marinum_M A-----------------
MUL_1610|M.ulcerans_Agy99 A-----------------
MAB_2618|M.abscessus_ATCC_1997 VSA---------------