For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0445 | - | 100% (145) | CONSERVED HYPOTHETICAL PROTEIN | |
M. thermoresistible (build 8) | TH_4219 | - | 6e-06 | 30.69% (101) | PUTATIVE pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
M. thermoresistible (build 8) | TH_0229 | - | 4e-05 | 27.69% (130) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3099 | - | 9e-57 | 84.25% (127) | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
M. tuberculosis H37Rv | Rv2074 | - | 9e-60 | 85.38% (130) | hypothetical protein Rv2074 |
M. leprae Br4923 | MLBr_01508 | - | 6e-05 | 28.03% (132) | hypothetical protein MLBr_01508 |
M. abscessus ATCC 19977 | MAB_2193c | - | 3e-59 | 83.09% (136) | hypothetical protein MAB_2193c |
M. marinum M | MMAR_3056 | - | 3e-60 | 86.36% (132) | hypothetical protein MMAR_3056 |
M. avium 104 | MAV_2422 | - | 5e-60 | 86.15% (130) | nitrilase/cyanide hydratase and apolipoprotein |
M. smegmatis MC2 155 | MSMEG_3880 | - | 2e-63 | 84.89% (139) | nitrilase/cyanide hydratase and apolipoprotein |
M. ulcerans Agy99 | MUL_2300 | - | 2e-60 | 86.36% (132) | hypothetical protein MUL_2300 |
M. vanbaalenii PYR-1 | Mvan_3436 | - | 4e-61 | 87.12% (132) | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
CLUSTAL 2.0.9 multiple sequence alignment Rv2074|M.tuberculosis_H37Rv -----------MAMVNT-TTRLSDDALAFLSERHLAMLTTLRADNSPHVV MAV_2422|M.avium_104 -------------MANT-TTRLTDDALAFLSERHLAMLTTLRADNSPHVV MMAR_3056|M.marinum_M -------------MAKT-TTRLTNDALAFLSERHLAMLTTLRADNSPHVV MUL_2300|M.ulcerans_Agy99 ------------MMAKT-TTRLTNDALAFLSERHLAMLTTLRADNSPHVV MAB_2193c|M.abscessus_ATCC_199 -------------MPNTPTTRLTDDALAFLSERHLAMLTTLRQDNSPHVV Mflv_3099|M.gilvum_PYR-GCK ---------------------MTEDALAFLTERHLAMLTTLRSDGSPHVV Mvan_3436|M.vanbaalenii_PYR-1 --------------MAKATTRLTDDALTFLSERHLAMLTTLRADGSPHVV MSMEG_3880|M.smegmatis_MC2_155 ----------MAASRGKATTRLTTDALAFLTERHLAMLTTLRSDGSPHVV TH_0445|M.thermoresistible__bu ----------MATSGGKATTRLTNDALAFLSERHLAMLTTLRTDGSPHVV MLBr_01508|M.leprae_Br4923 MRFGASLLRVRRRLYGMGSQVFDDKLLAVISGNSIGVLATIKRDGRPQLS : . *:.:: . :.:*:*:: *. *:: Rv2074|M.tuberculosis_H37Rv AVGFTFDPKTHIARVITTGGSQKAVNADR--SGLAVLSQVDGARWLSLEG MAV_2422|M.avium_104 AVGFTFDPKTHIARVITTGGSQKAINADR--GGLAVLSQVDGARWLSLEG MMAR_3056|M.marinum_M AVGFTFDPHTHIARVITTGGSQKAVNADR--GGIAVLSQVDGARWLSLEG MUL_2300|M.ulcerans_Agy99 AVGFTFDPHTHIARVITTGGSQKAVNADR--GGIAVLSQVDGARWLSLEG MAB_2193c|M.abscessus_ATCC_199 AVGFTFDPATHIARVITTGGSQKAVNAER--GGVAVLSQVDGARWLSLEG Mflv_3099|M.gilvum_PYR-GCK AVGFTFDPTTHIARVITSGGSQKAVNAEH--RGVAVLSQVDGARWLSLEG Mvan_3436|M.vanbaalenii_PYR-1 AVGFTFDPTTHIARVITSGGSQKAVNAEQ--RGVAVLSQVDGARWLSLEG MSMEG_3880|M.smegmatis_MC2_155 AVGFTFDPKTHIARVITTGGSQKAVNAQE--RGVAVLSQVDGARWLSLEG TH_0445|M.thermoresistible__bu AVGFTFDPQTHIARVITSGGSQKALNAER--QGVAVLSQVDGARWLSLEG MLBr_01508|M.leprae_Br4923 NVQYHFDPRDLAVRVSITEPGVKTRNLRRDPRASILVDVDDGWSYAVAEG * : *** .** : . *: * . . ::. ** : ** Rv2074|M.tuberculosis_H37Rv RAAVNS-----DIDAVRDAELRYA---------QRYRTPRPNPRRVVIEV MAV_2422|M.avium_104 RSKVNS-----DVDAVRDAELRYA---------QRYRTPRPNPRRVVIEV MMAR_3056|M.marinum_M NALVNN-----DLDAVRDAELRYA---------QRYRTPRPNPRRVVIEV MUL_2300|M.ulcerans_Agy99 NALVNN-----DLDAVRDAELRYA---------QRYRTPRPNPRRVVIEV MAB_2193c|M.abscessus_ATCC_199 SATVVT-----DKDAVRDAELRYA---------QRYRTPRVNPKRVVIEV Mflv_3099|M.gilvum_PYR-GCK KSAVLT-----DIEDVRDAERRYA---------QRYRTPRPNPKRVVIEV Mvan_3436|M.vanbaalenii_PYR-1 KSTVHT-----DIEAVRDAELRYA---------QRYRTPRPNPKRVVIEV MSMEG_3880|M.smegmatis_MC2_155 KSTVSS-----DPDAVRDAELRYA---------QRYRTPRVNPRRVVIEV TH_0445|M.thermoresistible__bu KASVNT-----DPAAVRDAELRYA---------QRYRTPRPNPRRVVIEV MLBr_01508|M.leprae_Br4923 TAELTPPAAAPDDDTVEALIVLYRNIVGEHLDWDEYRQAMVTDRRVLLTL : : * *. * :.** . . :**:: : Rv2074|M.tuberculosis_H37Rv QIERVLGSADLLDRA----- MAV_2422|M.avium_104 QIERVLGSSDLLDRGA---- MMAR_3056|M.marinum_M EIQRVLGSSSLLDRGD---- MUL_2300|M.ulcerans_Agy99 EIQRVLGSSSLLDRGD---- MAB_2193c|M.abscessus_ATCC_199 KIERVLGSSDLLNRADSPSE Mflv_3099|M.gilvum_PYR-GCK RIQRVLGSSRLLDRGED--- Mvan_3436|M.vanbaalenii_PYR-1 RIARVLGSSSLLDRGQD--- MSMEG_3880|M.smegmatis_MC2_155 RIERVLGSSELLDRS----- TH_0445|M.thermoresistible__bu LVERVLGSSHLLDRTPAPAD MLBr_01508|M.leprae_Br4923 PILHVYGLPPGIR------- : :* * . :