For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0313 | rplN | - | 100% (123) | PROBABLE 50S RIBOSOMAL PROTEIN L14 RPLN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0735 | rplN | 1e-59 | 88.52% (122) | 50S ribosomal protein L14 |
| M. gilvum PYR-GCK | Mflv_5037 | rplN | 8e-60 | 89.34% (122) | ribosomal protein L14 |
| M. tuberculosis H37Rv | Rv0714 | rplN | 1e-59 | 88.52% (122) | 50S ribosomal protein L14 |
| M. leprae Br4923 | MLBr_01849 | rplN | 4e-55 | 88.50% (113) | 50S ribosomal protein L14 |
| M. abscessus ATCC 19977 | MAB_3807c | rplN | 3e-58 | 86.07% (122) | 50S ribosomal protein L14 |
| M. marinum M | MMAR_1045 | rplN | 2e-59 | 87.70% (122) | 50S ribosomal protein L14, RplN |
| M. avium 104 | MAV_4455 | rplN | 1e-59 | 88.52% (122) | 50S ribosomal protein L14 |
| M. smegmatis MC2 155 | MSMEG_1465 | rplN | 3e-59 | 88.52% (122) | ribosomal protein L14 |
| M. ulcerans Agy99 | MUL_0804 | rplN | 2e-59 | 86.89% (122) | 50S ribosomal protein L14 |
| M. vanbaalenii PYR-1 | Mvan_1332 | rplN | 9e-60 | 89.34% (122) | ribosomal protein L14 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv0714|M.tuberculosis_H37Rv MIQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDVIVATVKDAIPGG
MAV_4455|M.avium_104 MIQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDVIVATVKDAIPGG
Mb0735|M.bovis_AF2122/97 MIQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDVIVATVKDAIPGG
MMAR_1045|M.marinum_M MIQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDIIVATVKDAIPGG
MUL_0804|M.ulcerans_Agy99 MIQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDIIVATVKDAIPGG
Mflv_5037|M.gilvum_PYR-GCK MIQQESRLKVADNTGAKEILCIRVLGGSGRRYAGIGDVIVATVKDAIPGG
MSMEG_1465|M.smegmatis_MC2_155 MIQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDVIVATVKDAIPGG
Mvan_1332|M.vanbaalenii_PYR-1 MIQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDVIVATVKDAIPGG
MAB_3807c|M.abscessus_ATCC_199 MIQQESRLKVADNTGAKEILCIRVLGGSSRRYAGIGDIIVATVKDAIPGG
MLBr_01849|M.leprae_Br4923 ---------MADNTGAKEILCIRVLGGSSRRYASIGDVIVGTVKDAIPGG
TH_0313|M.thermoresistible__bu VIQQESRVKVADNTGAREILCIRVLGGSGRRYAGIGDVIVGTVKEAMPGG
:******:***********.****.***:**.***:*:***
Rv0714|M.tuberculosis_H37Rv NVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFG
MAV_4455|M.avium_104 NVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFG
Mb0735|M.bovis_AF2122/97 NVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFG
MMAR_1045|M.marinum_M NVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFG
MUL_0804|M.ulcerans_Agy99 NVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFG
Mflv_5037|M.gilvum_PYR-GCK NVKRGDVVKAVIVRTVKERRRADGSYIRFDENAAVIIKNDNDPRGTRIFG
MSMEG_1465|M.smegmatis_MC2_155 NVKRGDVVKAVVVRTVKERRRADGSYIKFDENAAVIIKNDNDPRGTRIFG
Mvan_1332|M.vanbaalenii_PYR-1 NVKRGDVVKAVVVRTAKERRRADGSYIKFDENAAVIIKNDNDPRGTRIFG
MAB_3807c|M.abscessus_ATCC_199 TVKRGDVVKAVVVRTVKERRRPDGSYIKFDENAAVIIKADNDPRGTRIFG
MLBr_01849|M.leprae_Br4923 NVKRGDVVKAVVVRTAKECRRPDGSYIKFDENAAVIIKPDNDPRGTRIFG
TH_0313|M.thermoresistible__bu NVKRGEIVRAVIVRTAKERRRPDGSYIKFDENAAVLIKNDNDPRGTRIFG
.****::*:**:***.** **.*****:*******:** ***********
Rv0714|M.tuberculosis_H37Rv PVGRELREKRFMKIISLAPEVL
MAV_4455|M.avium_104 PVGRELREKRFMKIISLAPEVL
Mb0735|M.bovis_AF2122/97 PVGRELREKRFMKIISLAPEVL
MMAR_1045|M.marinum_M PVGRELREKRFMKIISLAPEVL
MUL_0804|M.ulcerans_Agy99 PVGRELREKRFMKLISLAPEVL
Mflv_5037|M.gilvum_PYR-GCK PVGRELREKKFMKIVSLAPEVL
MSMEG_1465|M.smegmatis_MC2_155 PVGRELREKKFMKIVSLAPEVL
Mvan_1332|M.vanbaalenii_PYR-1 PVGRELREKKFMKIVSLAPEVL
MAB_3807c|M.abscessus_ATCC_199 PVGRELRDKKFMKIVSLAPEVL
MLBr_01849|M.leprae_Br4923 PVGRELREKRFMKIISLAPEVL
TH_0313|M.thermoresistible__bu PVGRELREKRFMKIVSLAPEVL
*******:*:***::*******