For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0181 | - | 100% (297) | HYPOTHETICAL PROTEIN Rv0381c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0388c | - | 1e-106 | 66.20% (287) | hypothetical protein Mb0388c |
| M. gilvum PYR-GCK | Mflv_0243 | - | 1e-115 | 68.47% (295) | hypothetical protein Mflv_0243 |
| M. tuberculosis H37Rv | Rv0381c | - | 1e-106 | 66.20% (287) | hypothetical protein Rv0381c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4259c | - | 4e-90 | 54.30% (291) | hypothetical protein MAB_4259c |
| M. marinum M | MMAR_0650 | - | 1e-108 | 65.54% (296) | hypothetical protein MMAR_0650 |
| M. avium 104 | MAV_4789 | - | 1e-102 | 64.69% (286) | hypothetical protein MAV_4789 |
| M. smegmatis MC2 155 | MSMEG_0738 | - | 1e-106 | 63.18% (296) | hypothetical protein MSMEG_0738 |
| M. ulcerans Agy99 | MUL_0122 | - | 1e-107 | 64.86% (296) | hypothetical protein MUL_0122 |
| M. vanbaalenii PYR-1 | Mvan_0662 | - | 1e-115 | 68.15% (292) | hypothetical protein Mvan_0662 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0388c|M.bovis_AF2122/97 MRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMS
Rv0381c|M.tuberculosis_H37Rv MRILVAWATCGAVVLSGLTGCSGSSHSGRTYGAQSARTGESLAVLGWNMS
MAV_4789|M.avium_104 -----------------MTACSNPHPAARPYGAQGARLGEALALLGWNMS
MMAR_0650|M.marinum_M MRFLIALA----IAFSCLVACSRS-ESDLVYGAQRARFGQALPVLGWNMR
MUL_0122|M.ulcerans_Agy99 MRFLIALA----IALSCLVACSRS-ESDLVYGAQRARFGQALPVLGWNMR
Mflv_0243|M.gilvum_PYR-GCK -MPVRLIALLAALVLAVASCSGDSADRRDVFSVPTATLGESQTLLGWNMS
Mvan_0662|M.vanbaalenii_PYR-1 ---MRVIAILTALLLAVTSCS-EPQRRDDVFSAATAKIGESLAILGWNMS
MSMEG_0738|M.smegmatis_MC2_155 --MRALIAVVTTLMLVVTTACSDDHTPTRTYEALTTTVGQALDILGWHIT
TH_0181|M.thermoresistible__bu -----MLPALLTAVLVLAGCSPGDPAADHVYGAPMTELGASQAVLGWNMS
MAB_4259c|M.abscessus_ATCC_199 MTCRRALLALLAGVLVLAGCSKEP-EKQLVYGAQSAKIGETQSLLGWNLS
. : . : * : :***::
Mb0388c|M.bovis_AF2122/97 VSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALG
Rv0381c|M.tuberculosis_H37Rv VSNLRWSGDYVLIDVDASPTDPHAPHAKPEDIRFGLYGALAHPMESAALG
MAV_4789|M.avium_104 LSNLRWDGDYVLVDVDASPASAKGPHAKPEDIRFGLYGALAHPMEAAGLG
MMAR_0650|M.marinum_M VSNLRWSGDYVLVNVDASPTQQDTPHAKPEDVRYGLYGALSHPMEANGLG
MUL_0122|M.ulcerans_Agy99 VSNLRWSGDYVLVNVDASPTQQDTPHAKPEDVRYGLYGALSHPMEANGLG
Mflv_0243|M.gilvum_PYR-GCK VANLRFEAEYVLVDVDAAPAREGEPHAAPEDLRFGLYGALVHPLEADGLG
Mvan_0662|M.vanbaalenii_PYR-1 VSNLRFDAENVLIDVDASPAAEGEPHAAPEDIRFGLYGALAHPLEANALG
MSMEG_0738|M.smegmatis_MC2_155 LSDLRFEADRVLVDVDATPSADQR--AKPEDLRFGLYGALAHPIEATGIG
TH_0181|M.thermoresistible__bu VSNLRWDGDHVLVDIDAAPSEEDAPHARPEDIRLGLYGALAHPIEANALG
MAB_4259c|M.abscessus_ATCC_199 VANLRFQNGYVLIDVTGAAARAGDKPSPAAELRFGLYGSLSHPLEAPALS
:::**:. **::: .:.: : . ::* ****:* **:*: .:.
Mb0388c|M.bovis_AF2122/97 SCGDAMAH-VRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDR
Rv0381c|M.tuberculosis_H37Rv SCGDAMAH-VRDVVSPLSAPAGRLTGTVCLGPLKERSAVRGVYTYSPRDR
MAV_4789|M.avium_104 SCDSTTTS-LRDVPAPLSAPPDRLTGTVCLGPLKDRSQVRGVYGYSPRDR
MMAR_0650|M.marinum_M SCDDAMTK-VRDIGSPLSGAPDRLLGTVCLGPLTDRSAVRGVYAYSPHDR
MUL_0122|M.ulcerans_Agy99 SCDDAMTK-VRDIGSPLSGAQDRLLGTVCLGPLTDRSAVRGVYAYSPHDR
Mflv_0243|M.gilvum_PYR-GCK SCEDVTSLGVNPVSAS----PDRMSGTVCIGPLRDRSQVRGVYAYSPRDR
Mvan_0662|M.vanbaalenii_PYR-1 GCRDVTSLDIQPLSAPT---PDRLTGTVCLGPLRDRSQVRGVYVYSPRDR
MSMEG_0738|M.smegmatis_MC2_155 ACSDVPSLALQPLAASPAQNPDKLSGTVCLGPQRDQSQVRGVYVYSPRDR
TH_0181|M.thermoresistible__bu SCRTFAGLHVNPATAPT---PDRITGTVCLGPLRDQSQVRGVYVYSPQDR
MAB_4259c|M.abscessus_ATCC_199 GCAGLADLSIHPLAVLA---PDQLSGTVCLGPMQNQSAVRGVYAYSAKDR
.* :. .:: ****:** ::* ***** **.:**
Mb0388c|M.bovis_AF2122/97 IPGTAAAYPAAFPVGMLPTNQNDAG-LVVKTTSVSAWRADGMQLGKPQLG
Rv0381c|M.tuberculosis_H37Rv IPGTAAAYPAAFPVGMLPTNQNDAG-LVVKTTSVSAWRADGMQLGKPQLG
MAV_4789|M.avium_104 IPNSSSAYPVAFPVGLLPTNPNDSGGLAVKTASLSAWRADGTPVTKAQLG
MMAR_0650|M.marinum_M IAKTAAAYPAAFPVGMLPTNQNDTG-LTVKTTSLSAWRADGTPLTKAQLG
MUL_0122|M.ulcerans_Agy99 IAKTAAAYPAAFPVGMLPTNQNDTG-LTVKTTSLSAWRADGTPLTKAQLG
Mflv_0243|M.gilvum_PYR-GCK IAETTVAYPAAFPVGVLPTNSSETG-LSVKTSSVDAFRADGAQLNPTALG
Mvan_0662|M.vanbaalenii_PYR-1 MPGTTVAYPAAFPVGLPPTTGTDTG-LALKTTSVDAFRADGAKLSPTALG
MSMEG_0738|M.smegmatis_MC2_155 ISGTTVAYAAAFPVGVLPTNPNDTG-LSIKTTSVDGFSADGAQLAPTALG
TH_0181|M.thermoresistible__bu IPETAVAYGAGFPVGVLPTNENDTG-LILRTTSVEGFRADGTILTPEALG
MAB_4259c|M.abscessus_ATCC_199 IAGTTVAYPVAYPMGLLPTPQNDSG-LVITTKSMEAWRASGQQISQVDLG
:. :: ** ..:*:*: ** .::* * : * *:..: *.* : **
Mb0388c|M.bovis_AF2122/97 DPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSP
Rv0381c|M.tuberculosis_H37Rv DPVAFTGNGYMLLGLEVDAVPDRYRDDSAARGGPMMLLAAPTLPGRGLSP
MAV_4789|M.avium_104 DPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASPTLPGRGLNP
MMAR_0650|M.marinum_M DPAAFTGNGFMLLGLQVDALAARYRDDSAARGGPMMLLTSPTLPGRGLSP
MUL_0122|M.ulcerans_Agy99 DPAAFTGNGFMLLGLQVDALVARYRDDSAARGGPMMLLTSPTLPGRGLSP
Mflv_0243|M.gilvum_PYR-GCK DPAAFTGNGYMLLGLEVDGLAARYRDDSAQRGGPMMVLTAPTIPGKGLSH
Mvan_0662|M.vanbaalenii_PYR-1 DPAAFQGDGYMLLGLEISGLAARYRDDSAQRGGPMMVLTAPTRPGKGLSH
MSMEG_0738|M.smegmatis_MC2_155 EPEAFSGNGYMLLGLEITGLAQRYRDDSAQRGGPLMVVAAPTLPPPGLSH
TH_0181|M.thermoresistible__bu DPDAFTGNGYMLLGLQLDGLAQRYRDDSAERGGPLMVLAGPTLPPPGLSP
MAB_4259c|M.abscessus_ATCC_199 DPNAFTGNGYSLLGLNISGVAARYRDESAARGGPLMVTVAPTLPGPGLPR
:* ** *:*: ****: .: ****:*. ****:*: ..** * **
Mb0388c|M.bovis_AF2122/97 ACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAAL
Rv0381c|M.tuberculosis_H37Rv ACATYGSSVLILPDALLDAVHISASLCTQGEINEALLYATVATVGTHAAL
MAV_4789|M.avium_104 ACAAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGV
MMAR_0650|M.marinum_M SCAVYGSSVLILPDASMDAVQVNASLCTQGEINDALLYATVAVVGTHAAV
MUL_0122|M.ulcerans_Agy99 SCAVYGSSVLILPDASIDAVQVNASLCTQGEINDALLYATVAVVGTHAAV
Mflv_0243|M.gilvum_PYR-GCK ACDVYGSSVLVLPEASREAVQLRASLCTQGEINAALLYATVSLVGTHAAL
Mvan_0662|M.vanbaalenii_PYR-1 ACDVYGSSVLVLPDAARDSVQVGVSLCTQGEINAALLYATVSLTGTHAAL
MSMEG_0738|M.smegmatis_MC2_155 ACSVYGSSVLVLPDASREGVNMRASLCTQGEINAALLYASVSVIGTHAAL
TH_0181|M.thermoresistible__bu ACDVYGSSVLVLPDASRDAVQVKASLCTQGEINDALLYASVSLVGTHAAL
MAB_4259c|M.abscessus_ATCC_199 SCAVYGASVLVLPDAALDAVQLQPSLCLQGEINAAVLAGTLSVIGTHAAV
:* .**:***:**:* :.*:: *** ***** *:* .::: ****.:
Mb0388c|M.bovis_AF2122/97 WTSR--
Rv0381c|M.tuberculosis_H37Rv WTSR--
MAV_4789|M.avium_104 WTQR--
MMAR_0650|M.marinum_M WTSR--
MUL_0122|M.ulcerans_Agy99 WTSR--
Mflv_0243|M.gilvum_PYR-GCK WTTDDG
Mvan_0662|M.vanbaalenii_PYR-1 WTTDD-
MSMEG_0738|M.smegmatis_MC2_155 WTNHG-
TH_0181|M.thermoresistible__bu WTADA-
MAB_4259c|M.abscessus_ATCC_199 WMNRE-
*