For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0075 | - | - | 100% (162) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3306 | - | 2e-38 | 55.81% (129) | hypothetical protein Mflv_3306 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_3892 | - | 2e-13 | 63.83% (47) | hypothetical protein MAV_3892 |
| M. smegmatis MC2 155 | MSMEG_2376 | - | 2e-45 | 61.94% (134) | hypothetical protein MSMEG_2376 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3028 | - | 6e-38 | 55.04% (129) | hypothetical protein Mvan_3028 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3306|M.gilvum_PYR-GCK --------------MTDA--------SDATVDAVGKLTEALEFVERARGH
Mvan_3028|M.vanbaalenii_PYR-1 --MPGVTGGYLAS-VTDS--------SDATVEAVGKVTEALEFVERARGH
MSMEG_2376|M.smegmatis_MC2_155 MGIPRSMNERTANGSTDSRHARPPGVGDDTVEAAGKMSEALEYIERARGH
TH_0075|M.thermoresistible__bu MKSAHTDDEPSPDHQRPAD------ADDTAVEAAGLMSEALETIEQARGH
MAV_3892|M.avium_104 --------------------------MPHAKDDDGYYHCFQEIEQLVRGR
: : * * : .**:
Mflv_3306|M.gilvum_PYR-GCK LYSFHQLMGHADLLAGEASDALREAGADAIAERLETDLIGRNVLYGRWTF
Mvan_3028|M.vanbaalenii_PYR-1 LYSFHQLMGHADLLLGDACDALREAGSAAVAERLETDVVGRNVLFGRWTF
MSMEG_2376|M.smegmatis_MC2_155 LYTFHQLIGHADALLDEVCDKLREAGHDAAAERVQTELVGHNVLPGRWSF
TH_0075|M.thermoresistible__bu LYAFHQLTGRADGMLDDVVAKLTDAGHPELADLVDHELIGRNVLPGRWTF
MAV_3892|M.avium_104 LADGQRHR-HETALKERRRTGGHPAHTAAPGRLTREKRNRRRVMSTAWAH
* :: : : * . . :.*: *:.
Mflv_3306|M.gilvum_PYR-GCK QVVEEFDDNYWSPFRDHERQVREELLDGARHVHEARMKEERRTHGRKGHE
Mvan_3028|M.vanbaalenii_PYR-1 QVVEEFDDSYWSVLREHERRVRDELSGGARHVHEARMKEHRRTHGRSGHE
MSMEG_2376|M.smegmatis_MC2_155 QIVEEFDDMYWSLFREHERRLRDEFMDGARHVFESEMKERRRTHGRPGHE
TH_0075|M.thermoresistible__bu QVVEDYDDGYYDCFRGIERQIRDRLMRGRRHVYEAEMKERRRTHGHPAHT
MAV_3892|M.avium_104 HAAG---------LPEARKRPRGSRVAGG---------GRRYAGQRVGPE
: . : .:: * * .* : : .
Mflv_3306|M.gilvum_PYR-GCK ARP--------------
Mvan_3028|M.vanbaalenii_PYR-1 ARP--------------
MSMEG_2376|M.smegmatis_MC2_155 ATP--------------
TH_0075|M.thermoresistible__bu ARPPEQERLLTGDSGRR
MAV_3892|M.avium_104 GCG--------------
.