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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0030 | rpsK | - | 100% (136) | PROBABLE 30S RIBOSOMAL PROTEIN S11 RPSK |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3488c | rpsK | 1e-67 | 89.93% (139) | 30S ribosomal protein S11 |
| M. gilvum PYR-GCK | Mflv_4972 | - | 1e-69 | 93.38% (136) | 30S ribosomal protein S11 |
| M. tuberculosis H37Rv | Rv3459c | rpsK | 4e-68 | 90.65% (139) | 30S ribosomal protein S11 |
| M. leprae Br4923 | MLBr_01959 | rpsK | 2e-66 | 91.47% (129) | 30S ribosomal protein S11 |
| M. abscessus ATCC 19977 | MAB_3772c | rpsK | 2e-67 | 89.13% (138) | 30S ribosomal protein S11 |
| M. marinum M | MMAR_1088 | rpsK | 9e-68 | 92.48% (133) | 30S ribosomal protein S11, RpsK |
| M. avium 104 | MAV_4400 | rpsK | 2e-68 | 92.03% (138) | 30S ribosomal protein S11 |
| M. smegmatis MC2 155 | MSMEG_1522 | rpsK | 1e-68 | 90.58% (138) | 30S ribosomal protein S11 |
| M. ulcerans Agy99 | MUL_0846 | rpsK | 6e-68 | 92.48% (133) | 30S ribosomal protein S11 |
| M. vanbaalenii PYR-1 | Mvan_1434 | - | 3e-69 | 91.97% (137) | 30S ribosomal protein S11 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1088|M.marinum_M MPPKKASGT-GPKKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGN
MUL_0846|M.ulcerans_Agy99 MPPKKASGT-GPKKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGN
MLBr_01959|M.leprae_Br4923 MPPKKANAA-GPKKGQKTRKREKKNIPYGAAHIKSTFNNTIVTITDQQGN
MAV_4400|M.avium_104 MPPAKKAAA-APKKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGN
Mflv_4972|M.gilvum_PYR-GCK MAQAKKG---APKKGQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGN
MSMEG_1522|M.smegmatis_MC2_155 MAQAKKGGT-AAKKGQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGN
Mvan_1434|M.vanbaalenii_PYR-1 MAQAKKGG--APKKGQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGN
MAB_3772c|M.abscessus_ATCC_199 MAPKKPGAA-GPKKAQKTRRREKKNVPHGAAHIKSTFNNTIVSITDPQGN
Mb3488c|M.bovis_AF2122/97 MPPAKKGPATSARKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGN
Rv3459c|M.tuberculosis_H37Rv MPPAKKGPATSARKGQKTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGN
TH_0030|M.thermoresistible__bu MSAAKKGAA----KGKTTRRREKKNVPHGAAHIKSTFNNTIVTITDPQGN
*. * *.:.**:*****:*:**************:*** ***
MMAR_1088|M.marinum_M VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVRKVDVFVKGPG
MUL_0846|M.ulcerans_Agy99 VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVRKVDVFVKGPG
MLBr_01959|M.leprae_Br4923 VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVRKVDVFVMGPG
MAV_4400|M.avium_104 VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVRKVDVFVKGPG
Mflv_4972|M.gilvum_PYR-GCK VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVKKVDVFVKGPG
MSMEG_1522|M.smegmatis_MC2_155 VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVKKVDVFVKGPG
Mvan_1434|M.vanbaalenii_PYR-1 VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVKKVDVFVKGPG
MAB_3772c|M.abscessus_ATCC_199 VISWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVKKVDVFVKGPG
Mb3488c|M.bovis_AF2122/97 VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQDHGVRKVDVFVKGPG
Rv3459c|M.tuberculosis_H37Rv VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQDHGVRKVDVFVKGPG
TH_0030|M.thermoresistible__bu VLAWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVRKVDVFVKGPG
*::********************************:***:****** ***
MMAR_1088|M.marinum_M SGRETAIRSLQAAGLEVGAISDVTPQPHNGVRPPKRRRV
MUL_0846|M.ulcerans_Agy99 SGRETAIRSLQAAGLEVGAISDVTPQPHNGVRPPKRRRV
MLBr_01959|M.leprae_Br4923 SGRETAIRSLQAAGLEVGAISDVTPQPHNGCRPPKRRRV
MAV_4400|M.avium_104 SGRETAIRSLQAAGLEVGAISDVTPQPHNGVRPPKRRRV
Mflv_4972|M.gilvum_PYR-GCK SGRETAIRSLQAAGLEVGAIADVTPQPHNGCRPPKRRRV
MSMEG_1522|M.smegmatis_MC2_155 SGRETAIRSLQAAGLEVGTISDVTPQPHNGCRPPKRRRV
Mvan_1434|M.vanbaalenii_PYR-1 SGRETAIRSLQAAGLEVGAISDVTPQPHNGCRPPKRRRV
MAB_3772c|M.abscessus_ATCC_199 SGRETAIRSLQAAGLEVGAISDVTPQPHNGCRPPKRRRV
Mb3488c|M.bovis_AF2122/97 SGRETAIRSLQAAGLEVGAISDVTPQPHNGVRPPNRRRV
Rv3459c|M.tuberculosis_H37Rv SGRETAIRSLQAAGLEVGAISDVTPQPHNGVRPPKRRRV
TH_0030|M.thermoresistible__bu SGRETAIRSLQAAGLEVGAIADVTPQPHNGCRPPKRRRV
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