For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. tuberculosis H37Rv Rv3918c (parA)

annotation: PROBABLE CHROMOSOME PARTITIONING PROTEIN PARA
coordinates: 4406488 - 4407531
length: 347

SAPWGPVAAGPSALVRSGQASTIEPFQREMTPPTPTPEAAHNPTMNVSRETSTEFDTPIGAAAERAMRVL
HTTHEPLQRPGRRRVLTIANQKGGVGKTTTAVNIAAALAVQGLKTLVIDLDPQGNASTALGITDRQSGTP
SSYEMLIGEVSLHTALRRSPHSERLFCIPATIDLAGAEIELVSMVARENRLRTALAALDNFDFDYVFVDC
PPSLGLLTINALVAAPEVMIPIQCEYYALEGVSQLMRNIEMVKAHLNPQLEVTTVILTMYDGRTKLADQV
ADEVRQYFGSKVLRTVIPRSVKVSEAPGYSMTIIDYDPGSRGAMSYLDASRELAERDRPPSAKGRP*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. tuberculosis H37RvRv3918cparA-100% (347)PROBABLE CHROMOSOME PARTITIONING PROTEIN PARA
M. tuberculosis H37RvRv1708-2e-4638.55% (262) putative initiation inhibitor protein
M. tuberculosis H37RvRv3213c-3e-4339.92% (263) SOJ/PARA-like protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3949cparA0.0100.00% (347) chromosome partitioning protein ParA
M. gilvum PYR-GCKMflv_0834-1e-12779.25% (294) cobyrinic acid a,c-diamide synthase
M. leprae Br4923MLBr_02707parA1e-14677.65% (349) putative cell division protein
M. abscessus ATCC 19977MAB_4950c-1e-11569.01% (313) putative chromosome partitioning protein/ cobyrinic acid
M. marinum MMMAR_5482parA1e-15884.26% (343) chromosome partitioning protein ParA
M. avium 104MAV_5307-1e-15482.79% (337) CobQ/CobB/MinD/ParA nucleotide binding domain-containing
M. smegmatis MC2 155MSMEG_6939-1e-12877.12% (306) Soj family protein
M. thermoresistible (build 8)TH_2408parB1e-11185.11% (235) PROBABLE CHROMOSOME PARTITIONING PROTEIN PARA
M. ulcerans Agy99MUL_5071parA1e-15589.29% (308) chromosome partitioning protein ParA
M. vanbaalenii PYR-1Mvan_6072-1e-13180.53% (303) cobyrinic acid a,c-diamide synthase

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_0834|M.gilvum_PYR-GCK          ----------------------------------------MSGSSDPGVA
Mvan_6072|M.vanbaalenii_PYR-1       ----------------------------------------MSASTDSGIP
MSMEG_6939|M.smegmatis_MC2_155      --------------------------------------MGSGQNKGQGVV
TH_2408|M.thermoresistible__bu      --------------------------------------------------
Rv3918c|M.tuberculosis_H37Rv        -----MSAPWG-----------------------PVAAGPSALVRSGQAS
Mb3949c|M.bovis_AF2122/97           -----MSAPWG-----------------------PVAAGPSALVRSGQAS
MMAR_5482|M.marinum_M               MRLLRIPVPGAGASAAAKDDA-ESGGAAGVDKGSDAAAGTPAGVATGEAD
MUL_5071|M.ulcerans_Agy99           --------------------------------------------------
MLBr_02707|M.leprae_Br4923          -----MSSLQG---------------------WVDTPALWSASLTDQSAL
MAV_5307|M.avium_104                -----MTSSGDWPVASSEAREGAATPAPDASSATHTPAAPIGPGAPSGTP
MAB_4950c|M.abscessus_ATCC_199      -------------------------------------------MSSDDVS
                                                                                      

Mflv_0834|M.gilvum_PYR-GCK          EESGTAPADSV----SRETEGSRETDVSRETWNP-QDVDTPIGAEAARAV
Mvan_6072|M.vanbaalenii_PYR-1       EA--IPPAD-----------------VSRETWNS-PEVDTPIGAEAERAV
MSMEG_6939|M.smegmatis_MC2_155      QKPNVSRET---------------WDSATSTWVTDAAMDTPIAAEAEQAT
TH_2408|M.thermoresistible__bu      --------------------------------------------------
Rv3918c|M.tuberculosis_H37Rv        T---IEPFQRE-MTPPTPTPEAAHNPTMNVSRETSTEFDTPIGAAAERAM
Mb3949c|M.bovis_AF2122/97           T---IEPFQRE-MTPPTPTPEAAHNPTMNVSRETSTEFDTPIGAAAERAM
MMAR_5482|M.marinum_M               APEAVEATGPD-ADGVASAAESADNPTVNVSRETSSEFDTPIGAAAERAM
MUL_5071|M.ulcerans_Agy99           ----MEATGPD-ADGVASAAESADNPTVNVSRETSSEFDTPIGAAAERAM
MLBr_02707|M.leprae_Br4923          LSSEIQKTPPEPMFRQEAYYDAECVVEMNVSHETTNELDTPIGAAAERAM
MAV_5307|M.avium_104                GASAVASPAPTAATAPPSSAAAPAPPPANVSRETADEFDTPIGAAAERAM
MAB_4950c|M.abscessus_ATCC_199      RETGAASDG-------------------HRAPTEFVESETPIGAAAQRAT
                                                                                      

Mflv_0834|M.gilvum_PYR-GCK          RLMQAAVQGQLPRPSRQRVFTIANQKGGVGKTTTAVNIAAALALQGLRVL
Mvan_6072|M.vanbaalenii_PYR-1       RLMQAAVQGQLPRPKRQRVFTVANQKGGVGKTTTAVNIAAALALQGLRTL
MSMEG_6939|M.smegmatis_MC2_155      RVLHSSARRQLPRPERQRVFTIANQKGGVGKTTTAVNVAAALALQGLRTL
TH_2408|M.thermoresistible__bu      -----------------------------------VNVAAALALQGLKTL
Rv3918c|M.tuberculosis_H37Rv        RVLHTTHE-PLQRPGRRRVLTIANQKGGVGKTTTAVNIAAALAVQGLKTL
Mb3949c|M.bovis_AF2122/97           RVLHTTHE-PLQRPGRRRVLTIANQKGGVGKTTTAVNIAAALAVQGLKTL
MMAR_5482|M.marinum_M               RVLHTTHD-PLKPPHQRRVFTIANQKGGVGKTTTAVNLAAALAIQGLKTL
MUL_5071|M.ulcerans_Agy99           RVLHTTHD-PLKPPHQRRVFTIANQKGGVGKTTTAVNLAAALAIQGLKTL
MLBr_02707|M.leprae_Br4923          RVLHTTYD-PLCRPCHRRLFTIANQKGGVGKTTTAVNLAAALALQGLKAL
MAV_5307|M.avium_104                RILHTTYP-PLRRPKHRRVFTVANQKGGVGKTTTAVNLAAALALQGLKTL
MAB_4950c|M.abscessus_ATCC_199      QLKQGSVR--LPKPAHRRMLTIANQKGGVGKTTTAVNLAAAMALQGLNVL
                                                                       **:***:*:***..*

Mflv_0834|M.gilvum_PYR-GCK          VIDLDPQGNASTALGIEHR-PGTPSSYEVLIGEIGVESALQRSPHNERLY
Mvan_6072|M.vanbaalenii_PYR-1       VIDLDPQGNASTALGIEHR-PGTPSSYEVLIGDISVEAALQRSPHSERLY
MSMEG_6939|M.smegmatis_MC2_155      VIDLDPQGNASTALSIEHR-PGTPSSYEVLIGEIPVEEALQQSPHNERLY
TH_2408|M.thermoresistible__bu      VIDLDPQGNASTALGIEHR-PGTPSSYEVLIGEIELETALQRSPHNERLY
Rv3918c|M.tuberculosis_H37Rv        VIDLDPQGNASTALGITDRQSGTPSSYEMLIGEVSLHTALRRSPHSERLF
Mb3949c|M.bovis_AF2122/97           VIDLDPQGNASTALGITDRQSGTPSSYEMLIGEVSLHTALRRSPHSERLF
MMAR_5482|M.marinum_M               VIDLDPQGNASTALGITDRQSGTPSSYEVLIGEVSLREALRRSPHSDRLF
MUL_5071|M.ulcerans_Agy99           VIDLDPQGNASTALGITDRQSGTPSSYEVLIGDVSLREALRRSPRSDRLF
MLBr_02707|M.leprae_Br4923          VIDLDPQGNASTALGISNRQSRVFSSYDVLIGEVSLQTALRCSPYNERLF
MAV_5307|M.avium_104                VIDLDPQGNASTALGITDRQSGTPSSYEVLLGEVSVHDALRQSPHNERLF
MAB_4950c|M.abscessus_ATCC_199      VIDLDPQGNASTALGADHR-AGTPSSYEVLLGEIPIQDAIQSSPQSEHLF
                                    **************.  .* . . ***::*:*:: :. *:: ** .::*:

Mflv_0834|M.gilvum_PYR-GCK          CIPATIDLAGAEIELVSMVAREGRLRTALAELKHHDFDYVFIDCPPSLGL
Mvan_6072|M.vanbaalenii_PYR-1       CIPATIDLAGAEIELVSMVAREGRLRTALGELKHYDFDYVFIDCPPSLGL
MSMEG_6939|M.smegmatis_MC2_155      CIPATIDLAGAEIELVSMVAREGRLRTALAELKNHNFDYVFIDCPPSLGL
TH_2408|M.thermoresistible__bu      CVPATIDLAGAEIELVSMVAREGRLRGALAELKNYDFDYVFIDCPPSLGL
Rv3918c|M.tuberculosis_H37Rv        CIPATIDLAGAEIELVSMVARENRLRTALAALDNFDFDYVFVDCPPSLGL
Mb3949c|M.bovis_AF2122/97           CIPATIDLAGAEIELVSMVARENRLRTALAALDNFDFDYVFVDCPPSLGL
MMAR_5482|M.marinum_M               CVPATIDLAGAEIELVSMVARENRLRNALAELDQFDFDYVFVDCPPSLGL
MUL_5071|M.ulcerans_Agy99           CVPATIDLAGAEIELVSMVARENRLRNALAELDQFDFDYVFVDCPPSLGL
MLBr_02707|M.leprae_Br4923          CLPAAIDLAGAEIELVSMVARENRLRTALTELNDLDFDYVFIDCPPSLGL
MAV_5307|M.avium_104                CIPATIDLAGAEIELVSMVARENRLRTALADLDNLDFDCVFIDCPPSLGL
MAB_4950c|M.abscessus_ATCC_199      CVPATIDLAGAEIELVSMVAREGRLRSAIAGLPADAFDFVFIDCPPSLGL
                                    *:**:*****************.*** *:  *    ** **:********

Mflv_0834|M.gilvum_PYR-GCK          LTINALVAAPEVLIPIQCEYYALEGVGQLLRNIEMVKAHLNPELDVSTVV
Mvan_6072|M.vanbaalenii_PYR-1       LTINALVAAPEVLIPIQCEYYALEGVGQLLRNIEMVKAHLNPELEVTTVV
MSMEG_6939|M.smegmatis_MC2_155      LTINALVAAPEVLIPIQCEYYALEGVGQLLRNIEMVKAHLNPELSVSTVI
TH_2408|M.thermoresistible__bu      LTINALVAAPEVLIPIQCEYYALEGVGQLLRNIQMVKAHLNPELEVTTVL
Rv3918c|M.tuberculosis_H37Rv        LTINALVAAPEVMIPIQCEYYALEGVSQLMRNIEMVKAHLNPQLEVTTVI
Mb3949c|M.bovis_AF2122/97           LTINALVAAPEVMIPIQCEYYALEGVSQLMRNIEMVKAHLNPQLEVTTVI
MMAR_5482|M.marinum_M               LTINALVAAPEVLIPIQCEYYALEGVSQLMRNIEMVKAHLNPDLEVTTVI
MUL_5071|M.ulcerans_Agy99           LTINALVAAPEVLIPIQCEYYALEGVSQLMRNIEMVKAHLNPDLEVTTVI
MLBr_02707|M.leprae_Br4923          LTINALVAAPEVIIPIQCEYYALEGVSQLMCNIEMVKAHLNPQLEVTTVI
MAV_5307|M.avium_104                LTINALVAAPEVMIPIQCEYYALEGVSQLMRNIEMVKAHLNPQLEVSTVV
MAB_4950c|M.abscessus_ATCC_199      LTVNALVAANEVLIPIQCEYYALEGVGQLLRNIELVQAHLNPALHVSTIL
                                    **:****** **:*************.**: **::*:***** * *:*::

Mflv_0834|M.gilvum_PYR-GCK          LTMHDGRTKLADQVANDVREHFGNKVLRTVIPRSVKVSEAPGYGMTIISY
Mvan_6072|M.vanbaalenii_PYR-1       LTMYDGRTKLADQVAMDVRAHFGDKVLRTVIPRSVKVSEAPGYGMTIIDY
MSMEG_6939|M.smegmatis_MC2_155      LTMYDGRTKLADQVAEDVREHFGDKVLRTVIPRSVKVSEAPGYGMTILNY
TH_2408|M.thermoresistible__bu      LTMYDGRTKLADQVAADVRAHFGDKVLRTVIPRSVKVSEAPGYGMTILDY
Rv3918c|M.tuberculosis_H37Rv        LTMYDGRTKLADQVADEVRQYFGSKVLRTVIPRSVKVSEAPGYSMTIIDY
Mb3949c|M.bovis_AF2122/97           LTMYDGRTKLADQVADEVRQYFGSKVLRTVIPRSVKVSEAPGYSMTIIDY
MMAR_5482|M.marinum_M               LTMYDGRTKLADQVAEEVRSYFGDKVLRTVIPRSVKVSEAPGYSMTIIDY
MUL_5071|M.ulcerans_Agy99           LTMYDGRTKLADQVAEEVRSYFGDKALRTVIPRSVKVSEAPGYSMTIIDY
MLBr_02707|M.leprae_Br4923          LTMYDGRTKLADQVAEEVRRYFGTKVLQTVIPRSVKVSEAPGYSMTIIDY
MAV_5307|M.avium_104                LTMYDGRTKLADQVAEEVRRYFGSKVLRTVIPRSVKVSEAPGYSMTIIDY
MAB_4950c|M.abscessus_ATCC_199      LTMYDGRTKLADQVADEVRGHFGPKVLGSVIPRSVKVSEAPGYGTSVLEY
                                    ***:*********** :** :** *.* :**************. :::.*

Mflv_0834|M.gilvum_PYR-GCK          DPGSRGAMSYLDASRELALRGGTAQDEGGRDR----------
Mvan_6072|M.vanbaalenii_PYR-1       DPGSRGAMSYLDASRELALRGG---DEGGGDR----------
MSMEG_6939|M.smegmatis_MC2_155      DPGSRGALSYLDASREIAERGAPPRQQ---------------
TH_2408|M.thermoresistible__bu      DAGSRGAMSYLDASREIAERGLQQGRQAQQPGTGQPNSKDHA
Rv3918c|M.tuberculosis_H37Rv        DPGSRGAMSYLDASRELAERDRPPSAKGRP------------
Mb3949c|M.bovis_AF2122/97           DPGSRGAMSYLDASRELAERDRPPSAKGRP------------
MMAR_5482|M.marinum_M               DPGSRGAMSYLDASRELAQRDRPQTGKERA------------
MUL_5071|M.ulcerans_Agy99           DPGSRGAMSYLDASRELAQRDRPQTGKERA------------
MLBr_02707|M.leprae_Br4923          DPGSRGAMSYLDASRELAERDQPPSMKG--------------
MAV_5307|M.avium_104                DPGSRGAMSYLDASRELAERD---------------------
MAB_4950c|M.abscessus_ATCC_199      DPGSRGALSYLDAARELAQRPSSSASDPQ-------------
                                    *.*****:*****:**:* *