For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
EHDVATSPPAGWYTDPDGSAGQRYWDGDRWTRHRRPNPSAPRSPLALRVDGLRSRWLGMPAGLRLTVPVA AVLTMVGVAVYAWIRPLPDDWSQLPKRLSCQLRPGPTPPATITVASVDVSHPRGAVLRLVVRFAEPLPPS PSGSFASGFAGYLLTYTIANNGKEFAELGPQQDTDELAIRKPGESRGTEPNMRPDRNTNARRTAPDTVEI NLETKRLGLDQAPVDPQLTFAAQFRTPSTVTVDFGSQFCQGERLAGQRR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3482c | - | - | 100% (260) | PROBABLE CONSERVED MEMBRANE PROTEIN |
M. tuberculosis H37Rv | Rv3437 | - | 1e-05 | 64.29% (28) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3512c | - | 1e-154 | 100.00% (260) | hypothetical protein Mb3512c |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4964 | - | 1e-85 | 58.54% (246) | hypothetical protein MMAR_4964 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1312 | - | 2e-08 | 50.00% (48) | hypothetical protein MSMEG_1312 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0765 | - | 6e-07 | 38.67% (75) | hypothetical protein Mvan_0765 |
CLUSTAL 2.0.9 multiple sequence alignment Rv3482c|M.tuberculosis_H37Rv MEHDVATSPPAGWYTDPDGSAGQRYWDGDRWTRHRRPNPS-APRSPLALR Mb3512c|M.bovis_AF2122/97 MEHDVATSPPAGWYTDPDGSAGQRYWDGDRWTRHRRPNPS-APRSPLALR MMAR_4964|M.marinum_M ----MPTSPPAGWYADPGGSGGRRYWDGERWTEHCRADAG-IARSPLAAV MSMEG_1312|M.smegmatis_MC2_155 --MTAPNTPAAGWYPDPSGQPGQRYHDGRRWTQHFVPTPPPAPAAPPPAP Mvan_0765|M.vanbaalenii_PYR-1 -----MTQPTAGWYPDPSDPSRQRYFDGKTWTENYAPFPAPPPGIGQPAK . *.****.**.. :** ** **.: . . . . Rv3482c|M.tuberculosis_H37Rv VDGLRSRWLGMPAGLRLTVPVAAVLTMVGVAVYAWIRPLPDDWSQLPKRL Mb3512c|M.bovis_AF2122/97 VDGLRSRWLGMPAGLRLTVPVAAVLTMVGVAVYAWIRPLPDDWSQLPKRL MMAR_4964|M.marinum_M VDGVRRGWSAMPLALRLLLPIAFVLISAGIGVAFWLQSPPDNWARLPNHL MSMEG_1312|M.smegmatis_MC2_155 VAVAVATGGGPSHG----LHAVLTLLTCGMWLPIWI-------------L Mvan_0765|M.vanbaalenii_PYR-1 PGMSRGLKIGLGVG-----AAVLALVAIGN-------------------- . . . .* * Rv3482c|M.tuberculosis_H37Rv SCQLRPGPTPPATITVASVDVSHPRGAVLRLVVRFAEPLPPSPSG-SFAS Mb3512c|M.bovis_AF2122/97 SCQLRPGPTPPATITVASVDVSHPRGAVLRLVVRFAEPLPPSPSG-SFAS MMAR_4964|M.marinum_M ECRMQEGPKPPDQIVVAAVQVEHPSAGVLELVIRFAEPLPQSPSG-SHAS MSMEG_1312|M.smegmatis_MC2_155 VAIFGGGGTS-------AVAVSGAG------VVRTANRRPAMVVG-AVIG Mvan_0765|M.vanbaalenii_PYR-1 ---IGGNEKSAETRSSSTSPSSSFSESSTSTVTSASDDDAPAPAGSTVRD : . .. : . * :: . * : . Rv3482c|M.tuberculosis_H37Rv GFAGYLLTYTIANNGKEFAELGPQQDTDELAIRKPGESRGTEPNMRPDRN Mb3512c|M.bovis_AF2122/97 GFAGYLLTYTIANNGKEFAELGPQQDTDELAIRKPGESRGTEPNMRPDRN MMAR_4964|M.marinum_M GFVGYVLTFSVANNGRKFVELGPEEDTDDLAITATLTSNGNDVTMRPDRD MSMEG_1312|M.smegmatis_MC2_155 ---GLLLLGLVGQHPWLLVVFGVLGVVAGFGMWLLKSAQRREEQQRAEQF Mvan_0765|M.vanbaalenii_PYR-1 GKFEFQVLGVERGATSIDDAFGPEVAKGEFFTVRLRVTNIGDDARSFSAT : :* : :. : . Rv3482c|M.tuberculosis_H37Rv TNARRTAPDTVEINLETKRLGLDQAPVDPQLTFAAQFRTPS---TVTVDF Mb3512c|M.bovis_AF2122/97 TNARRTAPDTVEINLETKRLGLDQAPVDPQLTFAAQFRTPS---TVTVDF MMAR_4964|M.marinum_M TNARRTAPDTIEINLDLKRLGIENQLVVPTLTVDSQFNTPS---TTTVEF MSMEG_1312|M.smegmatis_MC2_155 QRDMLAQRAEYEDQLYQQ---------GDPRGVHGRYMPPP---TP---- Mvan_0765|M.vanbaalenii_PYR-1 NQKLIINGNEYEATSIMDDGWMEDINPGLGIEASATFDIPPGAVPSAIEC . * . . : *. . Rv3482c|M.tuberculosis_H37Rv GSQFCQGERLAGQRR Mb3512c|M.bovis_AF2122/97 GSQFCQGERLAGQRR MMAR_4964|M.marinum_M ASQVCT--------- MSMEG_1312|M.smegmatis_MC2_155 --------------- Mvan_0765|M.vanbaalenii_PYR-1 HDSMFSGGALLAL--