For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. tuberculosis H37Rv Rv3438 (-)

annotation: hypothetical protein Rv3438
coordinates: 3857397 - 3858239
length: 280

VPRIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEAGLHLPGVAFGHDWLTGTSRYSGLLEHLASWGI
VAAAPDSERGLAPSVLNLAFDLGVALDIVAGVRLGPGKISVHPAKLGLVGHGFGGSAAVFAAAGLTGTHV
KSVAAIFPTVTNPAAEQPAATLDVPGLILTAPGDPKTLTSNALGLSRAWDKATLRIVSKARAGGLVEGRR
LTKVLGLPGPHRRTQRSVRALLTGYLLYTLGGDKTYRRFADPDLQLPKTDPIDPEAPPITPGEKIVTLLK
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. tuberculosis H37RvRv3438--100% (280)hypothetical protein Rv3438

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3468-1e-161100.00% (280) hypothetical protein Mb3468
M. gilvum PYR-GCKMflv_4940-1e-10366.78% (283) hypothetical protein Mflv_4940
M. leprae Br4923MLBr_00370-1e-12879.86% (283) hypothetical protein MLBr_00370
M. abscessus ATCC 19977MAB_3744-4e-8356.69% (284) hypothetical protein MAB_3744
M. marinum MMMAR_1112-1e-12780.00% (280) hypothetical protein MMAR_1112
M. avium 104MAV_4380-1e-12377.86% (280) hypothetical protein MAV_4380
M. smegmatis MC2 155MSMEG_1567-1e-10367.38% (282) hypothetical protein MSMEG_1567
M. thermoresistible (build 8)TH_1702-1e-11371.89% (281) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_0870-1e-12679.64% (280) hypothetical protein MUL_0870
M. vanbaalenii PYR-1Mvan_1479-1e-10267.62% (281) hypothetical protein Mvan_1479

CLUSTAL 2.0.9 multiple sequence alignment


Rv3438|M.tuberculosis_H37Rv         ------MPRIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEAGLHLPG
Mb3468|M.bovis_AF2122/97            ------MPRIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEAGLHLPG
MLBr_00370|M.leprae_Br4923          MRYRRQVAHTRKLLAALSRRGPHRVLRGDLSFAGLPGVVYTPAGGLNLPG
MMAR_1112|M.marinum_M               ------MARIRNLVAALSRRGPHRVLRGDLAFAGLPGVVYTPEAGMNLPA
MUL_0870|M.ulcerans_Agy99           ------MARIRNLVAALSRRGPHRVLRGDLAFAGLPGVVYTPEAGMNLPA
MAV_4380|M.avium_104                ------MARIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEEGLNLPG
Mflv_4940|M.gilvum_PYR-GCK          ------MASTKKLFTALTRRGPHKVLRGDLAFAGQPGVLYTPAEGRNLPG
Mvan_1479|M.vanbaalenii_PYR-1       ------MASTKKLFAALTRRGPHRVLRGDLAFAGQPGIVYTPAAGKNLPG
TH_1702|M.thermoresistible__bu      VGYRHRVASTKKLFAALRRRGPHRVLRGDLAFAGLPGVVFTPEKGFNLPG
MSMEG_1567|M.smegmatis_MC2_155      ------MASTKKLFSALTRRGPHRVLRGDLAFAGLPGVIYTPESGFNLPG
MAB_3744|M.abscessus_ATCC_1997      ------MASTRTLFKALTRRGPHKVLRGDLAFAGVTGVVYTPEAGFNLPA
                                          :.  :.*. ** *****:******:*** .*:::**  * :**.

Rv3438|M.tuberculosis_H37Rv         VAFGHDWLTGTSRYSGLLEHLASWGIVAAAPDSERGLAPSVLNLAFDLGV
Mb3468|M.bovis_AF2122/97            VAFGHDWLTGTSRYSGLLEHLASWGIVAAAPDSERGLAPSVLNLAFDLGV
MLBr_00370|M.leprae_Br4923          VAFGHDWLTGTARYAGLLEHLASWGIVTGAPDTQRGLTPSVLNLAFDLGS
MMAR_1112|M.marinum_M               VAFGHDWLTGVARYSGLLEHLASWGIVAGAPDTQRGVAPSVLNLAFDMGV
MUL_0870|M.ulcerans_Agy99           VAFGHDWLTGVARYSDLLEHLASWGIVAGAPDTQRGVAPSVLNLAFDMGV
MAV_4380|M.avium_104                VAFGHDWLTGTARYANLLEHLASWGVVAAAPDTQRGLAPSVLNFAFDLGT
Mflv_4940|M.gilvum_PYR-GCK          VAFAHDWITSARRYDGTLEHLASWGIVAAAPNTETGLAPSVLNMAYDLGT
Mvan_1479|M.vanbaalenii_PYR-1       VAFAHDWITSADRYRGTLEHLASWGIVAGAPNTETGLAPSVLNLAYDLGT
TH_1702|M.thermoresistible__bu      VAFGHDWLAGADRYQGTLEHLASWGIVAAAPATETGVAPSVLNFAFDLGT
MSMEG_1567|M.smegmatis_MC2_155      VAFGHDWITKADNYAGTLEHLASWGIVAAAPNTETGPLPSVLNFAFDLGS
MAB_3744|M.abscessus_ATCC_1997      VAFGHDWLTGTDKYRATLEHLASWGIVAAAPDTEKGLVPSHLNLAADLAT
                                    ***.***:: . .*   ********:*:.** :: *  ** **:* *:. 

Rv3438|M.tuberculosis_H37Rv         ALDIVAGVRLGPGKISVHPAKLGLVGHGFGGSAAVFAAAGLT--------
Mb3468|M.bovis_AF2122/97            ALDIVAGVRLGPGKISVHPAKLGLVGHGFGGSAAVFAAAGLT--------
MLBr_00370|M.leprae_Br4923          ALDIVAGVRLGPGNISVHPAKLGLVGHGFGGSAAVLAAAGLPGLA-----
MMAR_1112|M.marinum_M               ALDIVAGVRLGPGDISVHPAKLGLVGHGFGGSAAVFAAAGMP--------
MUL_0870|M.ulcerans_Agy99           ALDIVAGVRLGPGDISVHPAKLGLVGHGFGGSAAVFAAAGMP--------
MAV_4380|M.avium_104                ALDIVSGVRLGPGKISVHPAKLGVAGHGFGASAAVFAAAGMP--------
Mflv_4940|M.gilvum_PYR-GCK          TLDIIAGVRLGEGAISVHPGKLGLVGHGFGGSAAVFAAVGLSS-A-----
Mvan_1479|M.vanbaalenii_PYR-1       TLDIITGVRLGQGDISVHPNKLGLVGHGFGASAVVFTAAGL---------
TH_1702|M.thermoresistible__bu      TLDIITGVRLGPGQISVHPAKLGVVGHGFGGSAAVFTAAGL---------
MSMEG_1567|M.smegmatis_MC2_155      ALDIVSGVRLGQGKISVHPAKRGLVGHGFGASAAVFAAAGLAS-A-----
MAB_3744|M.abscessus_ATCC_1997      TLEIVTRVRLGDGKISVHPSKLALVGHGLGASAAVFAATRTPALVDKKNR
                                    :*:*:: **** * ***** * .:.***:*.**.*::*.           

Rv3438|M.tuberculosis_H37Rv         GTHVKSVAAIFPTVTNPAAEQPAATLDVPGLILTAPGDPKTLTSNALGLS
Mb3468|M.bovis_AF2122/97            GTHVKSVAAIFPTVTNPAAEQPAATLDVPGLILTAPGDPKTLTSNALGLS
MLBr_00370|M.leprae_Br4923          GLPAKSAVAIFPTVTSPAPEQPAATCKVPGLILTAPGDPKTLNSNALSLY
MMAR_1112|M.marinum_M               -AKPAGVVAIFPTVTAPPAQQPAAGLKAKGLILSAPEDPKTLNSNALELS
MUL_0870|M.ulcerans_Agy99           -AKPAGVVAIFPTVTAPPAQQPAAGLKAKGLILSAPEDPKTLNSNALELS
MAV_4380|M.avium_104                -AKPAAVAAVFPSVTSPPAEQPAATLRMPGVIFTAPGDAKTLNSNALALA
Mflv_4940|M.gilvum_PYR-GCK          PHAPKAVVAAYPTVSSPAAEQPAAGLTVPGLILVDPGDPMSLRSNAVELA
Mvan_1479|M.vanbaalenii_PYR-1       PVKPKGVVAAYPTVSSPPAEAPAAGLTVAGLILTDPGDPMTLRSNAVELA
TH_1702|M.thermoresistible__bu      PRKPKAVAALFPSVTQPRAEEPAATLNVPGLILTAPGDPMTLRSNAVELA
MSMEG_1567|M.smegmatis_MC2_155      PNAPKTVAALFPTVTKPPAEQPAAGLRIPGLVLTDPGDRMTLRSNAVELA
MAB_3744|M.abscessus_ATCC_1997      PVGAKAVVTLFPSSTQPPVEASAVGLTIPGLVVTSAEDAHSLRSNAVALA
                                          ..: :*: : *  : .*.     *::.  . *  :* ***: * 

Rv3438|M.tuberculosis_H37Rv         RAWDKATLRIVSKARAGGLVEGRRLTKVLGLPGPHRRTQRSVRALLTGYL
Mb3468|M.bovis_AF2122/97            RAWDKATLRIVSKARAGGLVEGRRLTKVLGLPGPHRRTQRSVRALLTGYL
MLBr_00370|M.leprae_Br4923          RAWDDATLRIVSKAKAGGLVEGWRMTKVVGLAGPHRATQKAVRSLLTGYL
MMAR_1112|M.marinum_M               HAWDAATLRVVSKANPGGLIEGRRLTKVVGLAGSDRKTQRSVRALVTGYL
MUL_0870|M.ulcerans_Agy99           HAWDAATLRVVSKANPGGLIEGRRLTKVVGLAGSDRKTQRSVRALVTGYL
MAV_4380|M.avium_104                EVWDAATVRVISKAEPGGLIEGRRLTKVVGLAGAHRRTQRSVRALLTGYL
Mflv_4940|M.gilvum_PYR-GCK          RAWKPATLRATSKTKSGGLVEGRTLAKVVGLPGADRGTQKIVRALMTGYL
Mvan_1479|M.vanbaalenii_PYR-1       RAWKPATLRATSKTKSGGLVEGRRLAPVVGLPGADRGTQRIVRALMTGYL
TH_1702|M.thermoresistible__bu      RAWPTATLRAVDKGKAGGLIEGRRLARVVGLPGADRGTQKTVRALLTGYL
MSMEG_1567|M.smegmatis_MC2_155      RAWPDATLRAVDDVEAGGLVEGRRLAKFVGLPGADKGTQKRVRALLTGFL
MAB_3744|M.abscessus_ATCC_1997      QAWPGAELRYIAKAKAGGLPEHSWLRRFVGLGGASRTTQRNTRALLTGYL
                                    ..*  * :*   . ..*** *   :  .:** *. : **: .*:*:**:*

Rv3438|M.tuberculosis_H37Rv         LYTLGGDKTYRRFADPDLQLPKTDPIDP-EAPPITPGEKIVTLLK-
Mb3468|M.bovis_AF2122/97            LYTLGGDKTYRRFADPDLQLPKTDPIDP-EAPPITPGEKIVTLLK-
MLBr_00370|M.leprae_Br4923          LYALGGDKEYRDFADPDMHLPHTVPVDP-EAPLVTPEQKIVTLLK-
MMAR_1112|M.marinum_M               LHTLGGDKTYRDFADPDVHLPKTDPVDP-HAPPVTPEEKLVALLK-
MUL_0870|M.ulcerans_Agy99           LHTLGGDKTYRDFADPDVHLPKTDPVDP-HAPPVTPEEKLVALLK-
MAV_4380|M.avium_104                LYTLGGDKRYRDFADPHVQLPGTAAPDP-EAGAVPLEEKIVALLK-
Mflv_4940|M.gilvum_PYR-GCK          LHLLAGDKTYRDFSDADAELPRAEVMDPFADDPVDLENKVVALLKP
Mvan_1479|M.vanbaalenii_PYR-1       LYTLTGDKTYRAFADAEAELPRAPVMDPFASDPVDLENKVVALLKP
TH_1702|M.thermoresistible__bu      LHLLTGDKTYRAFAEPDAALPRTSLIDPTADDPVALEDKVVALLKP
MSMEG_1567|M.smegmatis_MC2_155      LATLAGDKTYRDFADPEVALPHAVTADP-AEDAAALEDRVVAMLKP
MAB_3744|M.abscessus_ATCC_1997      LSQLVGDKRYRDFADAAAELPNTSLPAA-DGREISELDRVQSLLK-
                                    *  * *** ** *::.   ** :    .         ::: ::**