For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NETPHAPVVEQVLVAAAFGNQPGSWPLPTAITPHHLWLRAVAAGGQGRYAHAYGDLSVLRRLVPAGPLAS LAHSTQGSLLRQLGWHTLARGWDGRALALAGADREAGADALIGLAADALGVGRFAAAGALLDRADPLVVS PLVADRLAVRRRWVAAELAMATGDGATAVRHAEEAVELTQAMAVASARHRVKSDVVLAAALCSAGAVARA RAVGEEALDATARFGLLPLRWALACLLIDIGTVTFSAQQLRELTKIRNICAGQVRRAGGCWRTA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3415c | - | - | 100% (275) | hypothetical protein Rv3415c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3449c | - | 1e-155 | 100.00% (275) | hypothetical protein Mb3449c |
M. gilvum PYR-GCK | Mflv_4913 | - | 1e-70 | 55.85% (265) | hypothetical protein Mflv_4913 |
M. leprae Br4923 | MLBr_00383 | - | 1e-107 | 73.48% (279) | hypothetical protein MLBr_00383 |
M. abscessus ATCC 19977 | MAB_3725c | - | 6e-64 | 51.91% (262) | hypothetical protein MAB_3725c |
M. marinum M | MMAR_1133 | - | 7e-97 | 68.13% (273) | hypothetical protein MMAR_1133 |
M. avium 104 | MAV_4360 | - | 9e-98 | 70.11% (271) | hypothetical protein MAV_4360 |
M. smegmatis MC2 155 | MSMEG_1598 | - | 1e-74 | 59.40% (266) | hypothetical protein MSMEG_1598 |
M. thermoresistible (build 8) | TH_2747 | - | 7e-77 | 58.62% (261) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1507 | - | 2e-69 | 57.68% (267) | hypothetical protein Mvan_1507 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4913|M.gilvum_PYR-GCK ----------------MDTTPAVSANDLSTAAFGGDPGLWPLPPASGAHD Mvan_1507|M.vanbaalenii_PYR-1 ----------------MSTAAAATANALHDAAFGADPGAWPLPPATEPLQ Rv3415c|M.tuberculosis_H37Rv --------MN------ETPHAPVVEQVLVAAAFGNQPGSWPLPTAITPHH Mb3449c|M.bovis_AF2122/97 --------MN------ETPHAPVVEQVLVAAAFGNQPGSWPLPTAITPHH MLBr_00383|M.leprae_Br4923 --------MTSVSIVVEIGHTSAAEPMLAAAAFGNQPGRWPLPTATTPHQ MAV_4360|M.avium_104 ---------------MQANVDGSVDRLLAEAAFGDRPDRWPLPAAGTPAQ MMAR_1133|M.marinum_M MGACVGPGITESDDRNFAVVASAIESTLDDAAFGSRPDRWPLPAAITPRQ MSMEG_1598|M.smegmatis_MC2_155 -----------------MSAIDDVTATLAEAAFGDDPGRWPLPSASTPHE TH_2747|M.thermoresistible__bu ------------MASRTCGTSGTAGEVLTSAAFGEDPGRWPLPPAATPHE MAB_3725c|M.abscessus_ATCC_199 ----------------MVTSPASASITLLDAAFGASPATWPLPCASTPQD * **** * **** * . . Mflv_4913|M.gilvum_PYR-GCK LWVRAVVAGGQGRYASGFADLDRLERLPR---SATTSSLALSTRASFLRQ Mvan_1507|M.vanbaalenii_PYR-1 WWLRAVAAGGQGRYASALADLDRLRRLTV---TDALASLALSTRASFLRQ Rv3415c|M.tuberculosis_H37Rv LWLRAVAAGGQGRYAHAYGDLSVLRRLVP---AGPLASLAHSTQGSLLRQ Mb3449c|M.bovis_AF2122/97 LWLRAVAAGGQGRYAHAYGDLSVLRRLVP---AGPLASLAHSTQGSLLRQ MLBr_00383|M.leprae_Br4923 LWLRAVAAGGQGHYSSAYRDLAVLRRSVP---AGRLASLAHSTHGSFLRQ MAV_4360|M.avium_104 LWLRAVAAGGQGRYGAALHDLARLRRTAT---AGRLASLAHSTQGSFLRQ MMAR_1133|M.marinum_M LWLRAVAAGGQGRYGSAYSDLALLRRRVP---ADRWSSLAHSTHASFLRQ MSMEG_1598|M.smegmatis_MC2_155 RWLRAVAAGGQGRYNCALTELAELIRAERGSLGTPLVSLAHSTRASFLRQ TH_2747|M.thermoresistible__bu LWLRAVAAGGQGRYGTALADLDTLRRGCA---GGAHHSLAHSTHASFLRQ MAB_3725c|M.abscessus_ATCC_199 AWLRAIALGGAGRYAAAHAELSAIPASRP----GGLASLALSTRASLLRQ *:**:. ** *:* . :* : *** **:.*:*** Mflv_4913|M.gilvum_PYR-GCK LGWHTVARGWDGRAAAVAAGSAEPGAADAGADALIGLAADALGVGRFAAS Mvan_1507|M.vanbaalenii_PYR-1 LGWHDRARTWDGRAAALAA------TGEAGADALIGLAADALGVGRFAAS Rv3415c|M.tuberculosis_H37Rv LGWHTLARGWDGRALALAGA-----DREAGADALIGLAADALGVGRFAAA Mb3449c|M.bovis_AF2122/97 LGWHTLARGWDGRALALAGA-----DREAGADALIGLAADALGVGRFAAA MLBr_00383|M.leprae_Br4923 LGWHSLARGWDGRALVLAGT-----DSEARADALIGLAADALGVGRLAAA MAV_4360|M.avium_104 LGWHALARGWDGRALALAGD-----DPEAGADALIGLAADALGVGRFAAA MMAR_1133|M.marinum_M LGWHTRARRWDGRALALAGA-----DPEAATDALVGLAADALGVGRFAAS MSMEG_1598|M.smegmatis_MC2_155 LGWHTRARGADGLAWAHRGT-----DPEAAADALVGLAADALGVGRFAAS TH_2747|M.thermoresistible__bu LGGHAHARGWDGRAWAAAGN-----HPDAAADALVGLAADALGLGRFSLA MAB_3725c|M.abscessus_ATCC_199 LAWHTHARGFDGRALSLAGS-----DAEARSDALVGLAADALGLARFPLA *. * ** ** * . :* :***:********:.*:. : Mflv_4913|M.gilvum_PYR-GCK ARALEGAAE-----LIGAAATSRPAVRMGWVSSELAMFRGDGPTAVAHAR Mvan_1507|M.vanbaalenii_PYR-1 ARALERAAD-----ALADTDCPRLPVRFAWVSAELAMFRGEGGRAVGHAE Rv3415c|M.tuberculosis_H37Rv GALLDRAD----PLVVSPLVADRLAVRRRWVAAELAMATGDGATAVRHAE Mb3449c|M.bovis_AF2122/97 GALLDRAD----PLVVSPLVADRLAVRRRWVAAELAMATGDGATAVRHAE MLBr_00383|M.leprae_Br4923 ATLLRRVGSALAPAQLPAQVADRLAVRRRWVAAELAMAVGDGATAVRHAR MAV_4360|M.avium_104 AALLARVEP---LLDSENIVPQRISVRRGWVAAELAMARGDGELAVRRAG MMAR_1133|M.marinum_M AALLSRADTVVAAAQLPPQVADRLAVRRCWVGAELAMFSGDGRTAVGLAE MSMEG_1598|M.smegmatis_MC2_155 ARLLERAR------TELGDVSARVAVRSAWVSAELAMVTGDGPTAVVHAE TH_2747|M.thermoresistible__bu RRLLDRSA------VPAAQGSQRLRVRQAWVTAELAMARGDAGTAVTHAE MAB_3725c|M.abscessus_ATCC_199 HALLEQAEP--LSGRGDARWPWRLPLRLAWVHAELAMVSGDGERALRYAH * * :* ** :**** *:. *: * Mflv_4913|M.gilvum_PYR-GCK RAVDLAAGFGS------VRHRVKSHVVLAAALCSSGDLDAARQEGDLALA Mvan_1507|M.vanbaalenii_PYR-1 RGAHLAESVGS------ARHTVKSQVILAAALCSRGDLDASRRVAGNALD Rv3415c|M.tuberculosis_H37Rv EAVELTQAMAV----ASARHRVKSDVVLAAALCSAGAVARARAVGEEALD Mb3449c|M.bovis_AF2122/97 EAVELTQAMAV----ASARHRVKSDVVLAAALCSAGAVARARAVGEEALD MLBr_00383|M.leprae_Br4923 EAVELAQVGRV----VSVRHQVKSDVVLAAALCSA-ATERARVVAEAALA MAV_4360|M.avium_104 EAVEAAAATALGAAGAAARHQVKSEVVLAAALCSAGDIERARAVADTALH MMAR_1133|M.marinum_M RGVELARASGG----ASARHRVKSDVVLAAALCSAGVIDKARVIGEAAFD MSMEG_1598|M.smegmatis_MC2_155 RGVAAAAEYAS------RRHTIKSDVVMAAALCSAGRPDDARVVADKALQ TH_2747|M.thermoresistible__bu QAVDLAAALGS------ARHRVKSAVVLAAALCAGGELDRSRRIADAALG MAB_3725c|M.abscessus_ATCC_199 AAEELAQDVPS------VRHQVKTTMVLAAALSSVGDLDKSAVVAARGLR . : ** :*: :::****.: : . .: Mflv_4913|M.gilvum_PYR-GCK DATRSGLVPLQWAVACLLADIGSQAYPAA---RIRAVRDASAEAVTRWGG Mvan_1507|M.vanbaalenii_PYR-1 AAQRLGLVPLQWAVASLLADIGADDRSPA---QIRGIRDAAAEAVIRWGG Rv3415c|M.tuberculosis_H37Rv ATARFGLLPLRWALACLLIDIGTVTFSAQQLRELTKIRNICAGQVRRAGG Mb3449c|M.bovis_AF2122/97 ATARFGLLPLRWALACLLIDIGTVTFSAQQLRELTKIRNICAGQVRRAGG MLBr_00383|M.leprae_Br4923 ATGRLGLIPLRWALACLLIDIGSVTFSEP---ELSELRDVCADQVRRAGG MAV_4360|M.avium_104 TTARLRLVPLRWALACLLIDIGSVEFSSR---QLHEIREVCAGQVRRAGG MMAR_1133|M.marinum_M DAGRLGLIPLRWALACLLIDTESVTLPVN---QLREIRDICADQVWRAGG MSMEG_1598|M.smegmatis_MC2_155 ATGDNGLIPLRWALACLLADIGSTAHTLE---EVREIRDGTADTVRRRGG TH_2747|M.thermoresistible__bu DTERYGLVPLRWAVCCLLADIGSAALSPE---RVAAVRAEAADTVRRRGG MAB_3725c|M.abscessus_ATCC_199 AASAHKLVPLRWALAAMLAGLPTPDEAGRRGEDLVAVRRECAAWIARAGG : *:**:**:..:* . : . : :* * : * ** Mflv_4913|M.gilvum_PYR-GCK VWRPR----------- Mvan_1507|M.vanbaalenii_PYR-1 VWRRR----------- Rv3415c|M.tuberculosis_H37Rv CWRTA----------- Mb3449c|M.bovis_AF2122/97 CWRTA----------- MLBr_00383|M.leprae_Br4923 TWRTA----------- MAV_4360|M.avium_104 TWRSA----------- MMAR_1133|M.marinum_M TWRPA----------- MSMEG_1598|M.smegmatis_MC2_155 VWSSR----------- TH_2747|M.thermoresistible__bu VWTARDPGPTDPTDKV MAB_3725c|M.abscessus_ATCC_199 EWRLEVVD-------- *