For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KARLPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLPRERADQLAAVTSGLASLAGGAAQLFDG GQVLQSVVEMQNGYLLLMQVGDGSALAALAATGCDIGQIGYEMAILVERVGGVVQSCRR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3364c | - | - | 100% (130) | hypothetical protein Rv3364c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3399c | - | 4e-69 | 100.00% (130) | hypothetical protein Mb3399c |
M. gilvum PYR-GCK | Mflv_4888 | - | 3e-47 | 74.40% (125) | roadblock/LC7 family protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1166 | - | 1e-59 | 87.69% (130) | hypothetical protein MMAR_1166 |
M. avium 104 | MAV_4330 | - | 3e-58 | 89.60% (125) | roadblock/LC7 domain-contain protein |
M. smegmatis MC2 155 | MSMEG_1638 | - | 4e-50 | 82.64% (121) | roadblock/LC7 domain-contain protein |
M. thermoresistible (build 8) | TH_0746 | - | 1e-42 | 79.09% (110) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_2849 | - | 1e-59 | 87.69% (130) | hypothetical protein MUL_2849 |
M. vanbaalenii PYR-1 | Mvan_1537 | - | 6e-52 | 82.11% (123) | roadblock/LC7 family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4888|M.gilvum_PYR-GCK MNPQ----PPQPDSSLDWLVARFAQDVAGVTHAILVSADGLLMAASGHIP TH_0746|M.thermoresistible__bu --------------------------VPGVSHAILVSADGLLMAASEHMP Mvan_1537|M.vanbaalenii_PYR-1 ------------MSSLDWLVARFAREVPGVSHAILVSADGLLMAASEHIP MSMEG_1638|M.smegmatis_MC2_155 -MTR----PTQRDS-LDWLVSKFAREVSGVSHAVLVSADGLLMAASENMP Rv3364c|M.tuberculosis_H37Rv MKAR------LPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLP Mb3399c|M.bovis_AF2122/97 MKAR------LPDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEHLP MMAR_1166|M.marinum_M MNTR------LSDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEYLP MUL_2849|M.ulcerans_Agy99 MNTR------LSDSPLDWLVSKFAREVPGVAHALLVSVDGLPVAASEYLP MAV_4330|M.avium_104 MTAPDNSWSAAPDRSLDWLVTKFAREVPGVAHALLVSVDGLPVAASEHLP *.**:**:***.*** :*** :* Mflv_4888|M.gilvum_PYR-GCK QERADQLAAVASGLASLSTGAAQLVDGGHVLQSVIEMEHGYLLLMRVGDG TH_0746|M.thermoresistible__bu TERADQLAAVASGLASLSTGAAQLFDGGHVLQSVVEMERGYLLLMRVGDG Mvan_1537|M.vanbaalenii_PYR-1 GERADQLAAVASGLASLSTGAAQLFDGGHVLQSVVEMENGYLLLMRVGDG MSMEG_1638|M.smegmatis_MC2_155 VERADQLAAVASGLASLATGAAQLFDGGYVLQSVVEMENGYLLLMRVGDG Rv3364c|M.tuberculosis_H37Rv RERADQLAAVTSGLASLAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDG Mb3399c|M.bovis_AF2122/97 RERADQLAAVTSGLASLAGGAAQLFDGGQVLQSVVEMQNGYLLLMQVGDG MMAR_1166|M.marinum_M RERADQLAAVASGLSSLASGAAQLFEGGQVLQSVVEMQNGFLLLMRVGDG MUL_2849|M.ulcerans_Agy99 RERADQLAAVASGLSSLASGAAQLFEGGQVLQSVVEMQNGFLLLMRVGDG MAV_4330|M.avium_104 RERADQLAAVASGLASLATGAAQLFEGGQVLQSVVEMSNGYLLLMQVGDG *********:***:**: *****.:** *****:**..*:****:**** Mflv_4888|M.gilvum_PYR-GCK SHLATLTARNGDIGQIGYEMAILVERVGAVVQAPRRPRQHQ-------- TH_0746|M.thermoresistible__bu SHLATLTARSGDIGQIGYEMAILVERVGNVVQAGRRTAQHS-------- Mvan_1537|M.vanbaalenii_PYR-1 SNLATLATRGCDIGQIGYEMAILVERVGAVVQSPRRTPQHS-------- MSMEG_1638|M.smegmatis_MC2_155 SNLATLAGRSCDIGQIGYEMAILVERVGAVVQSSRRAPQPS-------- Rv3364c|M.tuberculosis_H37Rv SALAALAATGCDIGQIGYEMAILVERVGGVVQSCRR------------- Mb3399c|M.bovis_AF2122/97 SALAALAATGCDIGQIGYEMAILVERVGGVVQSCRR------------- MMAR_1166|M.marinum_M SHLAALAVTGCDIGQIGYEMALLAERVGSVVQSSRRARPAPQWTDATRR MUL_2849|M.ulcerans_Agy99 SHLAALAVTGCDIGQIGYEMALLAERVGSVVQSSRRARPAPQWTDATRR MAV_4330|M.avium_104 SHLATLAAASCDIGQIGYEMAVLVERVGGVVQSTRRSSVS--------- * **:*: . **********:*.**** ***: **