For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SPRVPRLRWDDPFRALDMLASLWSSTGMSLVSAGAAQAVAAPYRTLFTTLQQLLIGKEVTVRIGDHDVVL TVTELDSALEPQGLAVGQLGEVRVAARGISWDQHHLHSAVAVLRNVHIRPGVPPLVIAAPVELSSALPTE IFDDVLRQATPQLRGELSESGAARLRWARRPDWGGLEVDVDVAGTTSQTTLWLRPRTVITGQRRWTLPAR TPAYRVPLPELPHGLRITDVSLAADCLQLSALLPEWRTELPLRYLESVITQLSQGALSFVWPPLRSGAD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3243c | - | - | 100% (280) | hypothetical protein Rv3243c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3271c | - | 1e-160 | 100.00% (280) | hypothetical protein Mb3271c |
M. gilvum PYR-GCK | Mflv_3429 | - | 3e-56 | 49.55% (220) | hypothetical protein Mflv_3429 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1302 | - | 1e-124 | 77.86% (280) | hypothetical protein MMAR_1302 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3630 | - | 2e-25 | 32.41% (216) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2579 | - | 1e-122 | 76.79% (280) | hypothetical protein MUL_2579 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv3243c|M.tuberculosis_H37Rv MSPRVPRLRWDDPFRALDMLASLWSSTGMSLVSAGAAQAVAAPYRTLFTT Mb3271c|M.bovis_AF2122/97 MSPRVPRLRWDDPFRALDMLASLWSSTGMSLVSAGAAQAVAAPYRTLFTT MMAR_1302|M.marinum_M MSPKVPFLRWDDPFRALEMLGSLWSSTGLQSVSAGAAQAVAMPYRTLFMT MUL_2579|M.ulcerans_Agy99 MSPKVPFLRWDDPFRALEMLGSLWSSTGLQSVSAGAAQAVAMPYRTLFMT Mflv_3429|M.gilvum_PYR-GCK -----------------------------MPVNSGAATA----YRTLFMT TH_3630|M.thermoresistible__bu ---MTGPLRRLRPPHPLDVLSAVWS-------------------TAAATP : . Rv3243c|M.tuberculosis_H37Rv LQQLLIGKEVTVRIGDHDVVLTVTELDSALEPQGLAVGQLGEVRVAARGI Mb3271c|M.bovis_AF2122/97 LQQLLIGKEVTVRIGDHDVVLTVTELDSALEPQGLAVGQLGEVRVAARGI MMAR_1302|M.marinum_M LQQLLVGKEVTVRMGDQDVVLTVTELDSALDPQGLAVGQLGEVRVAARDV MUL_2579|M.ulcerans_Agy99 LQQLLVGKEVTVRMGDQDVVLTVTGLDSALDPQGLAVGQLGEVRVAARDV Mflv_3429|M.gilvum_PYR-GCK VRRLVLGRRLTVRLGDGDVRLTVTRFDSRLDVHGLSVGQLNDVTVTAEDI TH_3630|M.thermoresistible__bu VAWLVKGRRLTVNIDGADVSLTITDFDPRMDILRLSVGRLGRVELGACDI : *: *:.:**.:.. ** **:* :*. :: *:**:*. * : * .: Rv3243c|M.tuberculosis_H37Rv SWDQHHLHSAVAVLRNVHIRPGVPPLVIAAPVELSSALPTEIFDDVLRQA Mb3271c|M.bovis_AF2122/97 SWDQHHLHSAVAVLRNVHIRPGVPPLVIAAPVELSSALPTEIFDDVLRQA MMAR_1302|M.marinum_M SWDEQRLQSAVAVLRNVHIRPGVPPMVVAAPVELSSVLPAAIFDEVLQQV MUL_2579|M.ulcerans_Agy99 SWDEQRLQSAVAVLRNVHIRPGVPPMVVAAPVELSSVLPAAIFDEVLQQV Mflv_3429|M.gilvum_PYR-GCK DWRTTHFDQATVILHNVHMKPGAPVVLVAAPVDVTLDLPAPALDDLLRAA TH_3630|M.thermoresistible__bu EWADNRIDRLTAVLHDVHLKPSVRPELVAGPVHLTADIPADVVPVWLASK .* ::. ..:*::**::*.. ::*.**.:: :*: . * Rv3243c|M.tuberculosis_H37Rv TPQLRGELSESGAARLRWARRPDWGGLEVDVDVAGTTSQTTLWLRPRTVI Mb3271c|M.bovis_AF2122/97 TPQLRGELSESGAARLRWARRPDWGGLEVDVDVAGTTSQTTLWLRPRTVI MMAR_1302|M.marinum_M APQLRSELSEDGTARLRWSRRPEWGGLEVDADVVG----TTLWLRPRAVM MUL_2579|M.ulcerans_Agy99 APQLRSELSEDGTARLRWSRRPEWGGLEVDADVVG----TTLRLRPRAVM Mflv_3429|M.gilvum_PYR-GCK APRLAGRIGEDGVARLGWAGYPRLGHVEVEARIDG----STLWLTARRVG TH_3630|M.thermoresistible__bu APRLSGDIDDDGVARIWLARRPHWGRLEIDARLER----STSGTATDHPX :*:* . :.:.*.**: : * * :*::. : :* . Rv3243c|M.tuberculosis_H37Rv TGQRRWTLPARTPAYRVPLPELPHGLRITDVSLAADCLQLSALLPEWRTE Mb3271c|M.bovis_AF2122/97 TGQRRWTLPARTPAYRVPLPELPHGLRITDVSLAADCLQLSALLPEWRTE MMAR_1302|M.marinum_M TGRRRWSLPARMPAYQVPLPPLPHGLLITHVNLGLDALQLSALLPEWRME MUL_2579|M.ulcerans_Agy99 TGRRRWSLPARMPAYQVPLPPLPHGLLITHVNLGLDALQLSALLPEWRME Mflv_3429|M.gilvum_PYR-GCK IGSTRWRLPGRTPAYPVSLPEMAHGLQLTAVTFAPGVVQISGRLPEWRTE TH_3630|M.thermoresistible__bu XXTRCWPTPGCAPSTRTDR------------------------------- * *. *: . Rv3243c|M.tuberculosis_H37Rv LPLRYLESVITQLSQGALSFVWPPLRSGAD Mb3271c|M.bovis_AF2122/97 LPLRYLESVITQLSQGALSFVWPPLRSGAD MMAR_1302|M.marinum_M LPLRHLEDLITRLSQGALSFSWPSLLRGSD MUL_2579|M.ulcerans_Agy99 LPLRHLEDLITRLSQGAFSFSWPSLLRGSD Mflv_3429|M.gilvum_PYR-GCK LL---------------------------- TH_3630|M.thermoresistible__bu ------------------------------