For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALAIIT RLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATP DASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSARSES LARAAEIGLAEMADLRREPREAIIACYVAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALV SLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTAI*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3166c | - | - | 100% (319) | hypothetical protein Rv3166c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3191c | - | 1e-176 | 100.00% (319) | hypothetical protein Mb3191c |
M. gilvum PYR-GCK | Mflv_0478 | - | 1e-51 | 42.50% (320) | hypothetical protein Mflv_0478 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1911c | - | 4e-36 | 34.49% (316) | hypothetical protein MAB_1911c |
M. marinum M | MMAR_1397 | - | 1e-92 | 57.05% (312) | hypothetical protein MMAR_1397 |
M. avium 104 | MAV_4054 | - | 1e-100 | 60.88% (317) | hypothetical protein MAV_4054 |
M. smegmatis MC2 155 | MSMEG_3869 | - | 5e-52 | 39.81% (309) | hypothetical protein MSMEG_3869 |
M. thermoresistible (build 8) | TH_4643 | - | 1e-48 | 50.00% (230) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2480 | - | 3e-92 | 57.05% (312) | hypothetical protein MUL_2480 |
M. vanbaalenii PYR-1 | Mvan_0178 | - | 4e-54 | 42.04% (314) | hypothetical protein Mvan_0178 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0478|M.gilvum_PYR-GCK MPEHTGPGDHRAVVRTIAVIVLIAVALVALRGYLPEASEPRPEPERLDSG Mvan_0178|M.vanbaalenii_PYR-1 MPDKIEPADNRAVVRTVAVAVLLLLAVVALRGYLPDGDRAAPPDERPESG Rv3166c|M.tuberculosis_H37Rv -MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGA--PLAAAGGS Mb3191c|M.bovis_AF2122/97 -MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGA--PLAAAGGS MMAR_1397|M.marinum_M -----MPGIDKPTGRVVALIVLLILVAAALRGYLPDDDGS--SHTEPATS MUL_2480|M.ulcerans_Agy99 -----MPGIDKPTGRVVALIVLLILVAAALRGYLPDDDGT--SHTEPATS MAV_4054|M.avium_104 -MP--MPGMDKPTGRVVALIVLLLVVAAALRGYLPAQHDA--TRSEAG-G TH_4643|M.thermoresistible__bu -------------------------------------------------- MSMEG_3869|M.smegmatis_MC2_155 -----MPGLQNAAGRVATVLVLMVVAVVALRGHVPGGSRA--QAQAPTDS MAB_1911c|M.abscessus_ATCC_199 -----MTGADRPLLRATGLIVLIALSVVALRSYLPDAAALP-----PPEK Mflv_0478|M.gilvum_PYR-GCK SGSVAAVVAMLAVSLAAIAISVLAQARQ-RSGIPSAAEPHRAPRAGPLRL Mvan_0178|M.vanbaalenii_PYR-1 TGSLVAVAAMLAVSIGIIAISILAQGRH-RLPAPDQGGPVRDLREPWPGL Rv3166c|M.tuberculosis_H37Rv RAALMFIVAALAATLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRP Mb3191c|M.bovis_AF2122/97 RAALMFIVAALAATLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRP MMAR_1397|M.marinum_M RPALVFVIAVLSGSVALMAFAIIARLRDPRAVAPSAGDLAQMLGGGHRRT MUL_2480|M.ulcerans_Agy99 RPALVFVIAVLSGSVALMAFAIIARLRDPRAVAPSAGDLAQMLGGGHRRT MAV_4054|M.avium_104 RAALGLVVAILAVTLALIAVAIVARLKDPRAPAPPAGALSETLGAGRGRP TH_4643|M.thermoresistible__bu -----------------------VWRRD-----------------GGSRP MSMEG_3869|M.smegmatis_MC2_155 PATFVAVAALLTVGLAGFAFAIFTAPRKPRVSGAGDDIPQAGLRGPRARL MAB_1911c|M.abscessus_ATCC_199 PRAQPHSNALQLLLCGVVSILILVSLRRQRPNMPLPQENPPYLRLPALTR . : Mflv_0478|M.gilvum_PYR-GCK RWRPLLIAAAILLAWSVVLLLLMRWVSPLPLDEPPAPQGASATDPAEGAE Mvan_0178|M.vanbaalenii_PYR-1 RWRPLLIAAAALLVWSVLMLLLMRWASPGVVDDAPPP--APGADARAETD Rv3166c|M.tuberculosis_H37Rv NWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDS-TATPDASS- Mb3191c|M.bovis_AF2122/97 NWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDS-TATPDASS- MMAR_1397|M.marinum_M SWRVLLIGLAVIAAYLLLTLLLSRLFTPDEVAPSAPVSDPGVPAPTGDG- MUL_2480|M.ulcerans_Agy99 SWRVLLIGLAVIAAYLLLTLLLSRLFTPDEVAPSAPASDPGVPAPTGDG- MAV_4054|M.avium_104 TWRVLLIGLGVIVAWLLIVMLLARLFASHGLAPAPPPGTGASPPPHPAAP TH_4643|M.thermoresistible__bu SWRVVLLGLSLVIAYLLTVTLVARLWAPSDPVRTEPDETGAETGPGIGP- MSMEG_3869|M.smegmatis_MC2_155 RWRWVLLGLAVLMCWLSVAVLISRLTDTSELPP--PQDGSGRESPGAPG- MAB_1911c|M.abscessus_ATCC_199 REAIIAAATVLVLMGGVWTALYLSGPAGEGPVREPASRSAEPTRPGAEP- : . : * . . Mflv_0478|M.gilvum_PYR-GCK PGPAPAPR------QTGAGDSVFGILAVATVVLLGLSVVGTLRG-RRQIP Mvan_0178|M.vanbaalenii_PYR-1 RGPAPQTP------TGDGGGSVFVLLAGTTILLLALSVAATLLG-RRRAP Rv3166c|M.tuberculosis_H37Rv --TTPSRP----QPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRK Mb3191c|M.bovis_AF2122/97 --TTPSRP----QPPQDNNDDVLGILFASTIGLFLMVVAGSLITSRRQRK MMAR_1397|M.marinum_M -APRPQQP----QQPSDDNINTLEILLAATAPLLLTILAAVAVLWRRRWR MUL_2480|M.ulcerans_Agy99 -APRPQQP----QQPSDDNINTLEILLAATAPLLLTILAAVAVLWRRRWR MAV_4054|M.avium_104 PAPPPQHP----QRPRDGSQDTLGILLAGTVAMLLMVVASAVAGARRRWR TH_4643|M.thermoresistible__bu -EVDPAVPGSSWADPPSAAADAMPHLPAATIAFVLMVIVGSLAARRRGLT MSMEG_3869|M.smegmatis_MC2_155 ---EARVP----DDPGD--ATAFRLLAVAGVIMLLLIAIGTILRARRR-A MAB_1911c|M.abscessus_ATCC_199 --PAPGKP----------SPRRYSEVPMMILGVVLVGIAAAVFVLRRHEP . : .. . ** Mflv_0478|M.gilvum_PYR-GCK APAV---PVEAPSDATTGGAGPDLVRAAELGLAEVDDPNRDAREAIIACY Mvan_0178|M.vanbaalenii_PYR-1 APPP---PVDPATVGTTP-AEPDLARAAELGLAEMGDLSRDPRQAIIACY Rv3166c|M.tuberculosis_H37Rv SAPARISGD-RIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACY Mb3191c|M.bovis_AF2122/97 SAPARISGD-RIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACY MMAR_1397|M.marinum_M AETSNTHTDVAGESPEPPQRSQLLVRAAKVGLAEMADLERDPREAIIACY MUL_2480|M.ulcerans_Agy99 AETSNTHTDVAGESPEPPQRSQLLVRAAKVGLAEMADLERDPREAIIACY MAV_4054|M.avium_104 SPAP-AVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACY TH_4643|M.thermoresistible__bu ASAP---TAAAAPAAPAERRSGSLARAAEVGLAEIGEPGREPRDAIIACY MSMEG_3869|M.smegmatis_MC2_155 AAHLHRADDTWPVLPVHPRNPEKLVRATELGLAEIGDLSRDPRTAIIACY MAB_1911c|M.abscessus_ATCC_199 DAPD-GSTGQPAEPDATPTTPRSLVHLVELGLAEVAEPGRDPRAAIIACY *.: .: ****: : *:.* ****** Mflv_0478|M.gilvum_PYR-GCK LAMERELEKSPGTTPQDSDTPSEVLARATRHHALQADSAAELVDLFEETR Mvan_0178|M.vanbaalenii_PYR-1 LAMERELEKSPGTIPQESDTPSEVLARAIERHALRADTGIELVDLFEEAR Rv3166c|M.tuberculosis_H37Rv VAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEAR Mb3191c|M.bovis_AF2122/97 VAMERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEAR MMAR_1397|M.marinum_M AAMERELANVPAAAPRDFDTPTEVLARAVQHHALQADNAVQLVNLFAEAR MUL_2480|M.ulcerans_Agy99 AAMERELANVPAAAPRDFDTPTEVLARAVQHHALQADNAVQLVNLFAEAR MAV_4054|M.avium_104 AAMERELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEAR TH_4643|M.thermoresistible__bu AAMERELARVPDAAPQQFDTASEVLARAVEHHALPPGSATRLVELFGEAR MSMEG_3869|M.smegmatis_MC2_155 AAMEQGLAYAPEAVPQESDTPSEVLARAVEHHALNADSATELVELFAEAR MAB_1911c|M.abscessus_ATCC_199 AAMEQGLTAAPEAAPLESDTPSEVLQRAVHIGALQSQAGTQLVSLFSEAR ***: * * . * : **.:*** ** . ** . **.** *:* Mflv_0478|M.gilvum_PYR-GCK FSPHVMDDGHRVAAVRALQAVLRDLRVAP---------- Mvan_0178|M.vanbaalenii_PYR-1 FSPHVMNEGHRADAVRALRQVQHQLQAAI---------- Rv3166c|M.tuberculosis_H37Rv FSPHVMNEEHREVAMRLLRLVLDELSTRTAI-------- Mb3191c|M.bovis_AF2122/97 FSPHVMNEEHREVAMRLLRLVLDELSTRTAI-------- MMAR_1397|M.marinum_M FSTHVMNEGHRELAVRVLRLVLDELAAPVGASTGRGDEM MUL_2480|M.ulcerans_Agy99 FSTHVMNEGHRELAVRVLRLVLDELAAPVGALTGRGDEM MAV_4054|M.avium_104 FSPHVMNEGHRDVAVRVLRLVLDELGSRSVA-------- TH_4643|M.thermoresistible__bu FSRHLMREEHRDAAVDALRVVLGHLRGQT---------- MSMEG_3869|M.smegmatis_MC2_155 FSPHRMTETHRAAAVAALQRVHADLRSLV---------- MAB_1911c|M.abscessus_ATCC_199 FSPHEMTQAHRQSAARWLQDVVDDLRSRQ---------- ** * * : ** * *: * .*