For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LNVYIPILVLAALAAAFAVVSVVIASLVGPSRFNRSKQAAYECGIEPASTGARTSIGPGAASGQRFPIKY YLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVAYAYVWRRGGLTWD
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3145 | nuoA | - | 100% (128) | NADH dehydrogenase subunit A |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3169 | nuoA | 1e-69 | 100.00% (128) | NADH dehydrogenase subunit A |
| M. gilvum PYR-GCK | Mflv_4481 | - | 3e-47 | 70.31% (128) | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2134 | - | 7e-43 | 60.94% (128) | NADH dehydrogenase subunit A |
| M. marinum M | MMAR_1483 | nuoA | 7e-58 | 85.94% (128) | NADH dehydrogenase I (chain a) NuoA (NADH- ubiquinone |
| M. avium 104 | MAV_4033 | nuoA | 2e-57 | 82.03% (128) | NADH dehydrogenase subunit A |
| M. smegmatis MC2 155 | MSMEG_2063 | nuoA | 4e-46 | 69.05% (126) | NADH dehydrogenase subunit A |
| M. thermoresistible (build 8) | TH_0637 | nuoA | 2e-44 | 66.41% (128) | PROBABLE NADH DEHYDROGENASE I (CHAIN A) NUOA |
| M. ulcerans Agy99 | MUL_2459 | nuoA | 5e-58 | 85.94% (128) | NADH dehydrogenase subunit A |
| M. vanbaalenii PYR-1 | Mvan_1885 | - | 1e-46 | 68.99% (129) | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv3145|M.tuberculosis_H37Rv -----------------------------------MNVYIPILVLAALAA
Mb3169|M.bovis_AF2122/97 -----------------------------------MNVYIPILVLAALAA
MMAR_1483|M.marinum_M MLKVTVTVHTPGPSQQPSQPPGRRAGGPYDGSWSDLNAYIPILVLATLAA
MUL_2459|M.ulcerans_Agy99 -----------------------------------MNAYIPILVLATLAA
MAV_4033|M.avium_104 -----MTVPKPGSSQQPGYRLAAAGG-SHDGSWSELNVYIPILVLGAIAT
Mflv_4481|M.gilvum_PYR-GCK -----------------------------------MNLYTPILVLGAIAA
Mvan_1885|M.vanbaalenii_PYR-1 ---------------------MVAHIDGPEELLRSMNLYTPILVLGAIAA
MSMEG_2063|M.smegmatis_MC2_155 -----------------------------------MALYTPILILGAIAA
TH_0637|M.thermoresistible__bu -----------------------------------MDVYTPILVLGAIAA
MAB_2134|M.abscessus_ATCC_1997 -----------------------------------MDAYVPILVLGAIAV
: * ***:*.::*.
Rv3145|M.tuberculosis_H37Rv AFAVVSVVIASLVGPSRFNRSKQAAYECGIEPASTGARTSIGPGAASGQR
Mb3169|M.bovis_AF2122/97 AFAVVSVVIASLVGPSRFNRSKQAAYECGIEPASTGARTSIGPGAASGQR
MMAR_1483|M.marinum_M GFAVVSVVIASLVGPTRFNRSKLAAYECGIEPTEAQAGAS-GRETASGQR
MUL_2459|M.ulcerans_Agy99 GFAVVSVVIASLVGPTRFNRSKLAAYECGIEPTEAQAGAS-GRETASGQR
MAV_4033|M.avium_104 AFAVGSVVIASLAGPSRFNKSKMAAYECGIEPTET--SVS-GPRATAGQR
Mflv_4481|M.gilvum_PYR-GCK VFAVGSVGIALLIGPRRFNRAKLEAYECGIEPMDAS----DPAVAATAQR
Mvan_1885|M.vanbaalenii_PYR-1 VFAVGSVGIALLIGPRRYNRAKLEAYECGIEPMAAT----DPAAAAVGQR
MSMEG_2063|M.smegmatis_MC2_155 VFAVVSVGIALVIGPRRFNRSKLEAYECGIDPLPP------VAAGLTGQR
TH_0637|M.thermoresistible__bu VFAVVSVGIAVAIGPRRYNRAKLEAYECGIEPTPPS-----AAVGGSAQR
MAB_2134|M.abscessus_ATCC_1997 VFAVFSVGVSSFVGPRRYNRAKLEAYECGIEATQHSMGRDHHGAAAGGHR
*** ** :: ** *:*::* ******:. .:*
Rv3145|M.tuberculosis_H37Rv FPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVA
Mb3169|M.bovis_AF2122/97 FPIKYYLTAMLFIVFDIEIVFLYPWAVSYDSLGTFALVEMAIFMLTVFVA
MMAR_1483|M.marinum_M FPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGTFALVEMAIFMLTVFVA
MUL_2459|M.ulcerans_Agy99 FPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGTFALVEMAIFMLTVFVA
MAV_4033|M.avium_104 FPVKYYLTAMLFIVFDIEIVFLYPWAVSYDALGTFALIEMVVFMLTVFVA
Mflv_4481|M.gilvum_PYR-GCK FPMRYYLTAMLFIVFDIEIVFLYPWAVAFDSLGMFALIEMLLFMVVVFVA
Mvan_1885|M.vanbaalenii_PYR-1 FPIRYYVTAMLFIVFDIEIVFLYPWAVAFDNLGLFALVEMLLFMVIVFVA
MSMEG_2063|M.smegmatis_MC2_155 IPIRYYLIAMLFIVFDIEIVFLYPWAVAFDSLGLFAVIEMLLFMLTVFVA
TH_0637|M.thermoresistible__bu FPIKFYLTAMMFIIFDIVIVFLYPWAVAFDGLGVFALVAMLLFMLTVFAA
MAB_2134|M.abscessus_ATCC_1997 VPVKYYLTAMLFIIFDIEIVFLYPWAVHFDALGVFGLLAMALFIVNVSVA
.*:::*: **:**:*** ********* :* ** *.:: * :*:: * .*
Rv3145|M.tuberculosis_H37Rv YAYVWRRGGLTWD
Mb3169|M.bovis_AF2122/97 YAYVWRRGGLTWD
MMAR_1483|M.marinum_M YAYVWRRGGLTWD
MUL_2459|M.ulcerans_Agy99 YAYVWRRGGLTWD
MAV_4033|M.avium_104 YAYVWRRGGLTWD
Mflv_4481|M.gilvum_PYR-GCK YAYVWRRGGLQWD
Mvan_1885|M.vanbaalenii_PYR-1 YGYVWRRGGLQWD
MSMEG_2063|M.smegmatis_MC2_155 YAYVWRRGGLNWD
TH_0637|M.thermoresistible__bu YVYVRRRGGLTWD
MAB_2134|M.abscessus_ATCC_1997 YAYEWRRGGLSWD
* * ***** **