For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VIRFDQIGSLVLSMKSLASLSFQRCLRENSSLVAALDRLDAAVDELSALSFDALTTPERDRARRDRDHHP WSRSRSQLSPRMAHGAVHQCQWPKAVWAVIDNP*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3126c | - | - | 100% (104) | hypothetical protein Rv3126c |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3149c | - | 8e-57 | 100.00% (104) | hypothetical protein Mb3149c |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3121 | - | 3e-06 | 64.71% (34) | hypothetical protein MMAR_3121 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2371 | - | 2e-06 | 64.71% (34) | hypothetical protein MUL_2371 |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3121|M.marinum_M MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVA
MUL_2371|M.ulcerans_Agy99 MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVA
Rv3126c|M.tuberculosis_H37Rv -----------MVIRFDQIG--SLVLSMKSLASLSFQRCLRENSSLVAAL
Mb3149c|M.bovis_AF2122/97 -----------MVIRFDQIG--SLVLSMKSLASLSFQRCLRENSSLVAAL
:* :*::. .* *: :*: . ** . * ..
MMAR_3121|M.marinum_M RRLPVAQYALLNQLDEQAGEAELGGRLAAVVASRLRITRSEAGRRVAEAA
MUL_2371|M.ulcerans_Agy99 RRLPAAQYALVNQLDEQPGEAELGGRLAAVVASRLRITRSEAGRRVAEAA
Rv3126c|M.tuberculosis_H37Rv DRLDAAVDELS-----------------ALSFDALTTPERDRAR------
Mb3149c|M.bovis_AF2122/97 DRLDAAVDELS-----------------ALSFDALTTPERDRAR------
** .* * *: . * .. : .*
MMAR_3121|M.marinum_M DVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRRLPAGVDV
MUL_2371|M.ulcerans_Agy99 EVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRQLPAGVDV
Rv3126c|M.tuberculosis_H37Rv --------------------------------------------------
Mb3149c|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M GTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDGRHSDEDRARRRGL
MUL_2371|M.ulcerans_Agy99 GTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDGRHSDEDRARRRGL
Rv3126c|M.tuberculosis_H37Rv --RDRDHHPWSRSRSQLSP---RMAHGAVHQCQWP---------------
Mb3149c|M.bovis_AF2122/97 --RDRDHHPWSRSRSQLSP---RMAHGAVHQCQWP---------------
*** . :: :*: * * : :* *
MMAR_3121|M.marinum_M SLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAAVVDGP
MUL_2371|M.ulcerans_Agy99 SLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAAVVDGP
Rv3126c|M.tuberculosis_H37Rv -------------------------KAVWAVIDNP---------------
Mb3149c|M.bovis_AF2122/97 -------------------------KAVWAVIDNP---------------
:**** : *
MMAR_3121|M.marinum_M VSPDAADRDSRSVGQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTL
MUL_2371|M.ulcerans_Agy99 VSRDAADRDSRSVSQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTL
Rv3126c|M.tuberculosis_H37Rv --------------------------------------------------
Mb3149c|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M KELEAAAGRGLTGGGTLLPMSDVIRLARHAHHYLAVFDRGEAIGLYHAKR
MUL_2371|M.ulcerans_Agy99 KELEAAAGRGLTGGGTLLPMSDVIRLARHAHHYLAVFDRGEAIGLYHAKR
Rv3126c|M.tuberculosis_H37Rv --------------------------------------------------
Mb3149c|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M LATPGQRIVLYAKDRGCTRPGCDVAGYQCEVHHVAAWAISGRTDINQLTL
MUL_2371|M.ulcerans_Agy99 LATPGQRIVLYAKDRGCTRPGCDVAGYQCEVHHVAAWAISGRTDINQLTL
Rv3126c|M.tuberculosis_H37Rv --------------------------------------------------
Mb3149c|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M ACGPDHKLLEQGWRTRKNAHGDTEWLPPPHLDHGQPRTNTYHHPEKLLRD
MUL_2371|M.ulcerans_Agy99 ACGPDHKLLEQGWRTRKNAHGDTEWLPPPHLDHGQPRTNSYHHPEKLLRD
Rv3126c|M.tuberculosis_H37Rv --------------------------------------------------
Mb3149c|M.bovis_AF2122/97 --------------------------------------------------
MMAR_3121|M.marinum_M SADDDDEGHGAA
MUL_2371|M.ulcerans_Agy99 SADDDDEGHGAA
Rv3126c|M.tuberculosis_H37Rv ------------
Mb3149c|M.bovis_AF2122/97 ------------