For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TKYRGQFELNRPATLIAALPAILGFVPEKSLVLVSLAAGELGSVMRADLCDELADRVGHLAELVAAANPA AAIAVIVDANGAQCPRCNEEYRQLCAALAAALSQRDIVLWAAHVVDRVAAGGRWHCVDGCGCSGVIDDPS ASPLAMAAVLDGRQLYPRRSDLQAVIAVDDPVRSAELAVALGHQAADREIAHRADSVGCSRQDVENALAA AARVADGQSLSDTELARLGCALGDARVRDMLYALAVGENAGAAESLWALLARVLPEPWRVEALVLLAFSA YARGDGPLAGVSLQAALCCEPGHRMAGMLDTALQSGLRPEHIRDIAVTGYQRAEQLGIRLPPRRAFGQRA G*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2712c | - | - | 100% (352) | hypothetical protein Rv2712c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2731c | - | 0.0 | 100.00% (352) | hypothetical protein Mb2731c |
M. gilvum PYR-GCK | Mflv_3950 | - | 1e-109 | 62.10% (343) | hypothetical protein Mflv_3950 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3030c | - | 5e-74 | 47.86% (351) | hypothetical protein MAB_3030c |
M. marinum M | MMAR_2001 | - | 1e-150 | 75.86% (348) | hypothetical protein MMAR_2001 |
M. avium 104 | MAV_3605 | - | 1e-143 | 74.22% (353) | hypothetical protein MAV_3605 |
M. smegmatis MC2 155 | MSMEG_2749 | - | 1e-112 | 60.70% (341) | hypothetical protein MSMEG_2749 |
M. thermoresistible (build 8) | TH_1488 | - | 1e-71 | 63.96% (222) | HYPOTHETICAL PROTEIN Rv2712c |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2449 | - | 1e-106 | 58.69% (351) | hypothetical protein Mvan_2449 |
CLUSTAL 2.0.9 multiple sequence alignment Rv2712c|M.tuberculosis_H37Rv ---------------------------------------MTK-----YRG Mb2731c|M.bovis_AF2122/97 ---------------------------------------MTK-----YRG MMAR_2001|M.marinum_M ---------------------------------------MTK-----HRS MAV_3605|M.avium_104 ---------------------------------------MTT-----HRQ Mflv_3950|M.gilvum_PYR-GCK ---------------------------------------MASRHH-PENH Mvan_2449|M.vanbaalenii_PYR-1 ---------------------------------------MATTPR-PYS- MSMEG_2749|M.smegmatis_MC2_155 MAREQFVSEVVPRADFVHSHSSQPVFGVNGVGAGCHGRHMTP----SPHT TH_1488|M.thermoresistible__bu -------------------------------------------------- MAB_3030c|M.abscessus_ATCC_199 ---------------------------------------MTSLIPGPAGR Rv2712c|M.tuberculosis_H37Rv -QFELNRPATLIAALPAILGFVPEKSLVLVSLAAGELGSVMRADLCDELA Mb2731c|M.bovis_AF2122/97 -QFELNRPATLIAALPAILGFVPEKSLVLVSLAAGELGSVMRADLCDELA MMAR_2001|M.marinum_M -EFELNRPAALIAALPAILGFVPEKSLVLVSLDDGELGSVLRADLSEDLV MAV_3605|M.avium_104 PDFTLSRPGALIAALPAVLGFVPESSLVLVSLEDGRLGSVLRVDLSDELA Mflv_3950|M.gilvum_PYR-GCK LDISLNRPGALIAALPAVLGFTPESSLVLVTVAHGELGAVLRGDLSDQSP Mvan_2449|M.vanbaalenii_PYR-1 ---SLDRPGALIAALPAVLGFVPERSLVLVTVADADMGAVLRADLSDPPP MSMEG_2749|M.smegmatis_MC2_155 PDFRINRPGSLIAALPAVLGFVPEKSLVLATIESGELGCVLRTDLSLAMR TH_1488|M.thermoresistible__bu -------------------------------------------------- MAB_3030c|M.abscessus_ATCC_199 PDFRLDRPSALIAALPAMLGFIPEDSLVVVTLADGLIEAVLRRDLRDLDN Rv2712c|M.tuberculosis_H37Rv DRVGHLAELVAAANPAAAIAVIVDANGAQCPRCNEEYRQLCAALAAALSQ Mb2731c|M.bovis_AF2122/97 DRVGHLAELVAAANPAAAIAVIVDANGAQCPRCNEEYRQLCAALAAALSQ MMAR_2001|M.marinum_M DRVEHLAEVAGAADPQAAIAVIVDEGGAQCPACNEVYRRVCAALAEALSQ MAV_3605|M.avium_104 HRVDHLAEVTAAARPEAVIAVIVDAAGAPCPSCNEDYRQLCDALLEALAR Mflv_3950|M.gilvum_PYR-GCK QRLCELAELAAASGADAAIAVIVDDEGAGCAMCADEHREATSTLGDELAR Mvan_2449|M.vanbaalenii_PYR-1 DQLCQLAELAAAAGAETAIAVIVDDSGAGCAMCADEHRRLANTLTDELDA MSMEG_2749|M.smegmatis_MC2_155 EGTAHLAEVAAAGEPHAVIAVIVDADGADCVHCHENHATLAEDVAIELSA TH_1488|M.thermoresistible__bu -------------------------------MCRPXX------------- MAB_3030c|M.abscessus_ATCC_199 PEHAAFEALAAVLGPGPADAVIAVVISP--VLDELEAGDIIRRLAKHLEY Rv2712c|M.tuberculosis_H37Rv RDIVLWAAHVVDRVAAGGRWHCVDGCGCSGVIDDPSASPLAMAAVLDGRQ Mb2731c|M.bovis_AF2122/97 RDIVLWAAHVVDRVAAGGRWHCVDGCGCSGVIDDPSASPLAMAAVLDGRQ MMAR_2001|M.marinum_M HNVVLRAAHVVDQIAVGGRWHCVDGCGSSGLIDDPAASPLAVAAVLDGRR MAV_3605|M.avium_104 NDIELYAAHVVDRVALGGRWHCVDGCGASGLIDDPSASPLAAAAVLDGRR Mflv_3950|M.gilvum_PYR-GCK VGVELMAAHVVPEVAAGARWYCVDGCGSSGVVDDPMASPTALAAVLDGRR Mvan_2449|M.vanbaalenii_PYR-1 HGVELAAAYVVAEIAGGARWYCVDGCGNSGVVEDPTASPTAVAAVLDGRR MSMEG_2749|M.smegmatis_MC2_155 RGIELLAVHVVDRIDAGGRWHCADGCGRNGVVEDPYASPLALAAVLDGRR TH_1488|M.thermoresistible__bu ------------------------XCGAGGRVEDPSASPLAAAAVLDGRR MAB_3030c|M.abscessus_ATCC_199 HGVSLIAGHVVDRVGAHGWWRCYDGCGAGGPVDDPQCSPLTAAAVLAGRT ** .* ::** .** : **** ** Rv2712c|M.tuberculosis_H37Rv LYPRRSDLQAVIAVDDPVRSAELAVALGHQAADREIAHRADSVGCSRQDV Mb2731c|M.bovis_AF2122/97 LYPRRSDLQAVIAVDDPVRSAELAVALGHQAADREIAHRADSVGCSRQDV MMAR_2001|M.marinum_M LYPRRADLQAVVELDESARAGELAGALAEHAAEREISYRADPSRCARRDV MAV_3605|M.avium_104 LYARRADLQAVIAVEDPERSAALTAAVRRQAGRRTAALRANPVRRTRGDV Mflv_3950|M.gilvum_PYR-GCK LYARRDELLDVVATVDGRRTGALAAVIEQAAPP--EAPRPDSQ--ARHDI Mvan_2449|M.vanbaalenii_PYR-1 LYRRRDELVAVVATADSARAAALGRKIESASAP--DPSRPDSE--ARSDV MSMEG_2749|M.smegmatis_MC2_155 LYKRRADLQAVVAA-DPVRAEKIAEAISAVAPR--SGRRRLSA--VRADI TH_1488|M.thermoresistible__bu LYTRRSELVAVVEP-APDRDPDLAEAITRTAERR-GELRTDAQ--ARRDV MAB_3030c|M.abscessus_ATCC_199 VHRRREDLVALIAPTDTTRTAALAVSLRRPFQG-----PCDTAAADRRAV :: ** :* :: * : : . * : Rv2712c|M.tuberculosis_H37Rv ENALAAAARVADGQSLSDTELARLGCALGDARVRDMLYALAVGENAGAAE Mb2731c|M.bovis_AF2122/97 ENALAAAARVADGQSLSDTELARLGCALGDARVRDMLYALAVGENAGAAE MMAR_2001|M.marinum_M ESAMAAAARVADGQSLSEVELARLGCALTDVQVRDTLYALAVGENADEAE MAV_3605|M.avium_104 EKAMAAAARVSSGEALSDTELARLGCALSDPQVRDMLYALAVGEGADEVE Mflv_3950|M.gilvum_PYR-GCK EHALECARRNEAGDTLSDDDLSRLAWALTDTRVRDTLYALAVGEAAGTAE Mvan_2449|M.vanbaalenii_PYR-1 EHALACVERGERDRPLADADLVRLAWSLTDARVRDTLYALAVGDSAGAAE MSMEG_2749|M.smegmatis_MC2_155 NAAITAAARLADGRTLTVRQQARIALALTDTRVRDTLYALAIGETAGQAE TH_1488|M.thermoresistible__bu QDMIAAAGRIAAGSDIGEPQLCALACALTDGRVRDTLYALAVGDDAAIAE MAB_3030c|M.abscessus_ATCC_199 NRVMRTACRAAEFRPLSNREILAIARSLMALRVRDTLCALAVGALAADVE : : . * : : :. :* :*** * ***:* * .* Rv2712c|M.tuberculosis_H37Rv SLWALLARVLPEPWRVEALVLLAFSAYARGDGPLAGVSLQAALCCEPGHR Mb2731c|M.bovis_AF2122/97 SLWALLARVLPEPWRVEALVLLAFSAYARGDGPLAGVSLQAALCCEPGHR MMAR_2001|M.marinum_M SLWGVLARALPAPWRAEALVLLAFSAYVRGDGPLTGVSLDAALRCAPGHR MAV_3605|M.avium_104 SLWAVLARTLPEPWRVEALVLVAFSAYARGDGPLAGVSLVEALRCEPGHR Mflv_3950|M.gilvum_PYR-GCK ALWAELSRTLPEPWRVEALVLLAFSAYVRGDGPLAGISLDAALRHAP-HR Mvan_2449|M.vanbaalenii_PYR-1 AVWAELARRLPEPWRVEALVLLAFSAYARGDGPLAGISLDQALRGEPLHN MSMEG_2749|M.smegmatis_MC2_155 SLWAELSRSLPAPWRVEALVQLAFSAYVRGDGPLAGIALDAALRCIPTHR TH_1488|M.thermoresistible__bu NLWAWLARMLPEPWRTEALVLLAFSAYARGDGPLAGVSLDAALRGDPNHR MAB_3030c|M.abscessus_ATCC_199 RLWLALSRLLPPPWRAEALVLLGFSAYVRGDGPLAGVALDAALMAQADHR :* *:* ** ***.**** :.****.******:*::* ** . *. Rv2712c|M.tuberculosis_H37Rv MAGMLDTALQSGLRPEHIRDIAVTGYQRAEQLGIRLPPRRA---FGQRAG Mb2731c|M.bovis_AF2122/97 MAGMLDTALQSGLRPEHIRDIAVTGYQRAEQLGIRLPPRRA---FGQRAG MMAR_2001|M.marinum_M MAGMLDTALQSGLRPEHIRDLAVTGYRLAKQLGVQLPPRRASGPYGRCAG MAV_3605|M.avium_104 MAGMLDTALQSGLRPEDIRDLARTGYRLAKQFGVRLPPRRP---FGRRAG Mflv_3950|M.gilvum_PYR-GCK MAGMLDRALQCGMRPEQIRELATTGYRLAAQLGVRLPPRRL---FGRRVG Mvan_2449|M.vanbaalenii_PYR-1 MAGMLEHALRSGMRPEQIRELARTGYRLAQQLGVRLPPRRL---FGRRAG MSMEG_2749|M.smegmatis_MC2_155 MASMLDTALQSGMPPDQVRELALTGYRQAERLGVQLPPRRTFGDGLRSAG TH_1488|M.thermoresistible__bu MAGMLDTALQSGLRPERIRELALTGYRMADRLGVRLPPRRA---FGRAG- MAB_3030c|M.abscessus_ATCC_199 LGQLLMSALLSGMRPDEIGTLADTGYRIAHELGISLPPRQI-----RRAG :. :* ** .*: *: : :* ***: * .:*: ****: : Rv2712c|M.tuberculosis_H37Rv - Mb2731c|M.bovis_AF2122/97 - MMAR_2001|M.marinum_M - MAV_3605|M.avium_104 - Mflv_3950|M.gilvum_PYR-GCK - Mvan_2449|M.vanbaalenii_PYR-1 - MSMEG_2749|M.smegmatis_MC2_155 A TH_1488|M.thermoresistible__bu - MAB_3030c|M.abscessus_ATCC_199 -