For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VATWDDVARIVGGLPLTAEQAPHDWRVGRKLLAWERPLRKSDREALTRAGSEPPSGDIVGVRVSDEGVKF ALIADEPGVYFTTPHFDGYPAVLVRLAEIEVRDLEELITEAWLMQAPKQLVQAFLANSG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2570 | - | - | 100% (129) | hypothetical protein Rv2570 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2600 | - | 6e-72 | 100.00% (129) | hypothetical protein Mb2600 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2161 | - | 2e-50 | 71.88% (128) | hypothetical protein MMAR_2161 |
M. avium 104 | MAV_3440 | - | 7e-54 | 76.56% (128) | hypothetical protein MAV_3440 |
M. smegmatis MC2 155 | MSMEG_3014 | - | 9e-45 | 66.93% (127) | hypothetical protein MSMEG_3014 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1745 | - | 4e-49 | 70.23% (131) | hypothetical protein MUL_1745 |
M. vanbaalenii PYR-1 | Mvan_5608 | - | 3e-14 | 38.24% (136) | hypothetical protein Mvan_5608 |
CLUSTAL 2.0.9 multiple sequence alignment Rv2570|M.tuberculosis_H37Rv ----MATWDDVARIVGGLPLTA-----EQAPHDWRVGRKLLAWERPLRKS Mb2600|M.bovis_AF2122/97 ----MATWDDVARIVGGLPLTA-----EQAPHDWRVGRKLLAWERPLRKS MAV_3440|M.avium_104 ----MATWYDVARIVGELALTS-----EPSPHDWRVGKKLLAWERPLRPS MMAR_2161|M.marinum_M ----MATWSDVARIVSELPLTE-----ERSAHNWRVGKKPLAWERPLRKS MUL_1745|M.ulcerans_Agy99 ----MATWSDVARIVSELPLTE-----ERSAHNWRVGKKPLAWERPLRKS MSMEG_3014|M.smegmatis_MC2_155 ----MADWYDVARIAAALPETD-----EQTPRTWRVRKKRIAWERPLRKA Mvan_5608|M.vanbaalenii_PYR-1 MGDRPATVDDVHEIATAMPHVTRVEGPKAGNPIYQVGGKSFVFFRTPRPD * ** .*. :. . : ::* * :.: *. * Rv2570|M.tuberculosis_H37Rv D---REALTRAGSEPPSGDIVGVRVSDEGVKFALIADEPGVYFTTPHFDG Mb2600|M.bovis_AF2122/97 D---REALTRAGSEPPSGDIVGVRVSDEGVKFALIADEPGVYFTTPHFDG MAV_3440|M.avium_104 E---REALARTGAEPAPGDVLGVRVADEGVKFALIDDAPQTFFTTPHFDG MMAR_2161|M.marinum_M D---LAALAASGRQPPDGDILGVRVADEGVKFALVADEPTVYFTTPHFDG MUL_1745|M.ulcerans_Agy99 DLAALAALAASGRQPPDGDILGVRVADEGVKFALVADEPTVYFTTPHFDG MSMEG_3014|M.smegmatis_MC2_155 D------LAALGADAPTGDILGVRVSDEGVKLALVADDPAVYFTTPHFDG Mvan_5608|M.vanbaalenii_PYR-1 A-------LDPDTGERYPDVIVIWVESEDDKLALTQDPDSPFFTTDHFDG . *:: : * .*. *:** * :*** **** Rv2570|M.tuberculosis_H37Rv YPAVLV---RLAEIEVRDLEELITEAWLMQAPKQLVQAFLANSG--- Mb2600|M.bovis_AF2122/97 YPAVLV---RLAEIEVRDLEELITEAWLMQAPKQLVQAFLANSG--- MAV_3440|M.avium_104 YPAVLV---NLAAISVRDLEELITEAWLTQAPRKLVQEFLADSR--- MMAR_2161|M.marinum_M YPAVLV---VLSEIEAIGLEELLTEAWLTQAPKKLAKEFLTGSAKSC MUL_1745|M.ulcerans_Agy99 YPAVLV---VLSEIEAIGLEELLTEAWLTQAPKRLAKEFLTGSAKSC MSMEG_3014|M.smegmatis_MC2_155 YPIVLI---RLAAIEPDELEELVTEAWLTQAPATLVEKFLADVQ--- Mvan_5608|M.vanbaalenii_PYR-1 HPSVLVRASRLGEVGVTELRELIQDAWLSRASKRRAQQWLAERGG-- :* **: *. : *.**: :*** :*. .: :*: