For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVNVGRGGDDTLFAKTAGAVEFGI KRGRKTVSIVGSTTA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv2441c | rpmA | - | 100% (86) | 50S ribosomal protein L27 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2468c | rpmA | 8e-45 | 100.00% (86) | 50S ribosomal protein L27 |
| M. gilvum PYR-GCK | Mflv_2636 | rpmA | 2e-36 | 88.89% (81) | 50S ribosomal protein L27 |
| M. leprae Br4923 | MLBr_01466 | rpmA | 3e-40 | 93.83% (81) | 50S ribosomal protein L27 |
| M. abscessus ATCC 19977 | MAB_1611 | rpmA | 1e-36 | 86.42% (81) | 50S ribosomal protein L27 |
| M. marinum M | MMAR_3766 | rpmA | 3e-40 | 90.59% (85) | 50S ribosomal protein L27 RpmA |
| M. avium 104 | MAV_1730 | rpmA | 4e-39 | 87.21% (86) | 50S ribosomal protein L27 |
| M. smegmatis MC2 155 | MSMEG_4624 | rpmA | 9e-38 | 91.36% (81) | 50S ribosomal protein L27 |
| M. thermoresistible (build 8) | TH_0999 | rpmA | 4e-35 | 83.95% (81) | PROBABLE 50S RIBOSOMAL PROTEIN L27 RPMA |
| M. ulcerans Agy99 | MUL_3713 | rpmA | 4e-40 | 90.59% (85) | 50S ribosomal protein L27 |
| M. vanbaalenii PYR-1 | Mvan_3945 | rpmA | 1e-37 | 87.21% (86) | 50S ribosomal protein L27 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2636|M.gilvum_PYR-GCK MAHKKGASSSRNGRDSNAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVN
Mvan_3945|M.vanbaalenii_PYR-1 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVN
MSMEG_4624|M.smegmatis_MC2_155 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVN
TH_0999|M.thermoresistible__bu MATKKGASSSRNGRDSAAKRLGVKRFGGQIVKAGEILVRQRGTRFHPGLN
MAB_1611|M.abscessus_ATCC_1997 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTHFHPGVN
Rv2441c|M.tuberculosis_H37Rv MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVN
Mb2468c|M.bovis_AF2122/97 MAHKKGASSSRNGRDSAAQRLGVKRYGGQVVKAGEILVRQRGTKFHPGVN
MMAR_3766|M.marinum_M MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTKFHPGVN
MUL_3713|M.ulcerans_Agy99 MAHKKGASSSRNGRDSAAHRLGVKRFGGQVVKAGEILVRQRGTKFHPGVN
MLBr_01466|M.leprae_Br4923 MAHKKGASSSRNGRDSAAQRLGVKRFGGQVVKAGEILVRQRGTKFHPGVN
MAV_1730|M.avium_104 MAHKKGASSSRNGRDSAAQRLGVKRFGGQIVKAGEIIVRQRGTKFHPGTG
** ************* *:******:***:******:******:**** .
Mflv_2636|M.gilvum_PYR-GCK VGRGGDDTLFATAPGAVEFGTKRGRKYVNIVRTVRSEA
Mvan_3945|M.vanbaalenii_PYR-1 VGRGGDDTLFATAPGAVEFGTKRGRKYVNIVRVTRAEA
MSMEG_4624|M.smegmatis_MC2_155 VGRGGDDTLFALAPGAVEFGAKRGRKTVNIVPVARPEA
TH_0999|M.thermoresistible__bu VGRGGDDTLFATAPGAVEFASKRGRKVVSVVPASRPEA
MAB_1611|M.abscessus_ATCC_1997 VGRGGDDTLFATSAGTVEFGARRGRRVVNILPVDA---
Rv2441c|M.tuberculosis_H37Rv VGRGGDDTLFAKTAGAVEFGIKRGRKTVSIVGSTTA--
Mb2468c|M.bovis_AF2122/97 VGRGGDDTLFAKTAGAVEFGIKRGRKTVSIVGSTTA--
MMAR_3766|M.marinum_M VGRGGDDTLFAKAAGAVQFGIKRGRKTINIVEPATQDA
MUL_3713|M.ulcerans_Agy99 VGRGGDDTLFAKAAGAVEFGIKRGRKTINIVEPATQDA
MLBr_01466|M.leprae_Br4923 VGRGGDDTLFATSAGAVEFGVKRGRKTVNIVAVGLTAD
MAV_1730|M.avium_104 VGRGGDDTLFAKQAGAVEFGIKRGRKTVNIVAAGQAAD
*********** .*:*:*. :***: :.::