For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVASGAATKGVTVMKQTPPAAVGRRHLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPED LMREHGVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQYVFPKLEQAGKLTDIT SVLRTQHQRGRVLTDRVLAATTAAAAFDQPARDTLAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEF RDMAETFEDEEHRRFGEAGFQSVVDKVADIEKSLGIYDLSQFTPS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1995 | - | - | 100% (255) | hypothetical protein Rv1995 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2018 | - | 1e-143 | 100.00% (255) | hypothetical protein Mb2018 |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2968 | - | 3e-87 | 67.78% (239) | hypothetical protein MMAR_2968 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2223 | - | 2e-86 | 65.46% (249) | hypothetical protein MUL_2223 |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2968|M.marinum_M --------------------------------------------------
MUL_2223|M.ulcerans_Agy99 MRRIEVGDVLAAHQLSDIHDQTVPVPDPDHLVHLQFRRFAGCPICNLHLR
Rv1995|M.tuberculosis_H37Rv --------------------------------------------------
Mb2018|M.bovis_AF2122/97 --------------------------------------------------
MMAR_2968|M.marinum_M --------------------------------------------------
MUL_2223|M.ulcerans_Agy99 SISGRHDEIVAAGIREVAVFHSSASALREYQAELPFATIADPAKELYREF
Rv1995|M.tuberculosis_H37Rv --------------------------------------------------
Mb2018|M.bovis_AF2122/97 --------------------------------------------------
MMAR_2968|M.marinum_M --------------------------------------------------
MUL_2223|M.ulcerans_Agy99 GVESSPKAVLSPRAWMAASRGMKGQSWRGAAGIGEGHLGLPADFLIGSDG
Rv1995|M.tuberculosis_H37Rv ---------------MVAS---------GAATKG----------------
Mb2018|M.bovis_AF2122/97 ---------------MVAS---------GAATKG----------------
MMAR_2968|M.marinum_M --------------------------------------MIDEPHRPLSRR
MUL_2223|M.ulcerans_Agy99 RVLATKYGNHADDQWSVDEPLDTGRLLPLRRLVTRGAIVIDEPHRPLSRR
Rv1995|M.tuberculosis_H37Rv --------------------------------VT---VMKQTPPAAVGRR
Mb2018|M.bovis_AF2122/97 --------------------------------VT---VMKQTPPAAVGRR
: : * .:.**
MMAR_2968|M.marinum_M RLFGIAMPVTGAIALSACTGSPRKPADAGASSS--EQVAVTAPEDLMREH
MUL_2223|M.ulcerans_Agy99 RLFGIAMPVTGAIALSACTGSPRKPADAGASSS--EQVTVTALEDLMREH
Rv1995|M.tuberculosis_H37Rv HLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMREH
Mb2018|M.bovis_AF2122/97 HLLEISASAAGVIALSACSGSPPEPGKGRPDTTPEQEVPVTAPEDLMREH
:*: *: ..:*.******:*** :*... ..:: ::*.*** *******
MMAR_2968|M.marinum_M GVLKRILLIYREGIHRLQVGDPAPTQELNASAQIIRAFVENYHEALEERY
MUL_2223|M.ulcerans_Agy99 GVLKRILLIYREGIHRLQVGDPAPTQELNASAQIIRAFVENYHEALEERY
Rv1995|M.tuberculosis_H37Rv GVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQY
Mb2018|M.bovis_AF2122/97 GVLKRILLIYREGIRRLQADDQSPAPALNESAQIIRRFIEDYHGQLEEQY
**************:***..* :*: ** ****** *:*:** ***:*
MMAR_2968|M.marinum_M VFPMLEQAGKFTDTTSVLRTQHQRGRGVTDRILAATAAAGSAPGQPGRDA
MUL_2223|M.ulcerans_Agy99 VFPMLEQAGKFTDTTSVLRTQHQRGRGVTDRILAATAAAGSAPGQPGRDA
Rv1995|M.tuberculosis_H37Rv VFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAA-AAFDQPARDT
Mb2018|M.bovis_AF2122/97 VFPKLEQAGKLTDITSVLRTQHQRGRVLTDRVLAATTAA-AAFDQPARDT
*** ******:** ************ :***:****:** :* .**.**:
MMAR_2968|M.marinum_M LVRDMTAFIRMYEPHEAREDTVIFPALRDVMPAGEFRDLAEVFEDEEHRQ
MUL_2223|M.ulcerans_Agy99 LVRDMTAFIRMYEPHEAREDTVIFPALRDVMPAGEFRDLAEVFEDEEHRQ
Rv1995|M.tuberculosis_H37Rv LAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRR
Mb2018|M.bovis_AF2122/97 LAQDMAAYIRMFEPHEAREDTVVFPALRDVMSAVEFRDMAETFEDEEHRR
*.:**:*:***:**********:********.* ****:**.*******:
MMAR_2968|M.marinum_M FGQAGFQGVVDQVADVEKALGIYELGQFTAS
MUL_2223|M.ulcerans_Agy99 FGQAGFQGVVDQVVDVEKALGIYELGQFTAS
Rv1995|M.tuberculosis_H37Rv FGEAGFQSVVDKVADIEKSLGIYDLSQFTPS
Mb2018|M.bovis_AF2122/97 FGEAGFQSVVDKVADIEKSLGIYDLSQFTPS
**:****.***:*.*:**:****:*.***.*