For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. tuberculosis H37Rv Rv1962c (-)

annotation: hypothetical protein Rv1962c
coordinates: 2204866 - 2205273
length: 135

IYLETSALVKLIRIEVESDALADWLDDRTELRWITSALTEVELSRAIRAVSPEGLPAVPSVLARLDRFEI
DAVIRSTAAAYPNPALRSLDAIHLATAQTAGSVAPLTALVTYDNRLKEAAEALSLAVVAPGQAR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. tuberculosis H37RvRv1962c--100% (135)hypothetical protein Rv1962c
M. tuberculosis H37RvRv3384c-4e-1843.08% (130) hypothetical protein Rv3384c
M. tuberculosis H37RvRv3408-2e-1136.23% (138) hypothetical protein Rv3408

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1997c-1e-69100.00% (135) hypothetical protein Mb1997c
M. gilvum PYR-GCK-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum M-----
M. avium 104-----
M. smegmatis MC2 155-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_1717-3e-2044.36% (133) PilT domain-containing protein

CLUSTAL 2.0.9 multiple sequence alignment


Rv1962c|M.tuberculosis_H37Rv       MIYLETSALVKLIRIEVESDALADWLDDR-TELRWITSALTEVELSRAIR
Mb1997c|M.bovis_AF2122/97          MIYLETSALVKLIRIEVESDALADWLDDR-TELRWITSALTEVELSRAIR
Mvan_1717|M.vanbaalenii_PYR-1      MIYLDTSAMVKLVVAEPESEELIDWLNERLTHDPIVTSIIGRVELHRAAL
                                   ****:***:***:  * **: * ***::* *.   :** : .*** **  

Rv1962c|M.tuberculosis_H37Rv       AVSPEGLPAVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQ
Mb1997c|M.bovis_AF2122/97          AVSPEGLPAVPSVLARLDRFEIDAVIRSTAAAYPNPALRSLDAIHLATAQ
Mvan_1717|M.vanbaalenii_PYR-1      RAGAEAMAAAREVLDGVDTLVLTEPIAALAGTMVPAELRTLDALHLATAE
                                    ...*.:.*. .**  :* : :   * : *.:   . **:***:*****:

Rv1962c|M.tuberculosis_H37Rv       TAGSVAPLTALVTYDNRLKEAAEALSLAVVAPGQAR
Mb1997c|M.bovis_AF2122/97          TAGSVAPLTALVTYDNRLKEAAEALSLAVVAPGQAR
Mvan_1717|M.vanbaalenii_PYR-1      IHR--EGLTAICAYDRRLVDAARARKLPVVAPGASV
                                          ***: :**.** :**.* .*.***** :