For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. tuberculosis H37Rv Rv1960c (-)

annotation: hypothetical protein Rv1960c
coordinates: 2203974 - 2204225
length: 83

GKNTSFVLDEHYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSGSSTPFDFDGF
LGRKRADASRGR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. tuberculosis H37RvRv1960c--100% (83)hypothetical protein Rv1960c

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1995c-3e-42100.00% (83) hypothetical protein Mb1995c
M. gilvum PYR-GCK-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum M-----
M. avium 104MAV_4555-1e-3584.34% (83) putative addiction module antidote protein, CC2985 family
M. smegmatis MC2 155-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99-----
M. vanbaalenii PYR-1-----

CLUSTAL 2.0.9 multiple sequence alignment


Rv1960c|M.tuberculosis_H37Rv      ---------------------------------------MGKNTSFVLDE
Mb1995c|M.bovis_AF2122/97         ---------------------------------------MGKNTSFVLDE
MAV_4555|M.avium_104              MWRADGQSGGQTTGVSRIFPRLTQPAGKRAIPIIGIASVVGKNTSFSLDE
                                                                         :****** ***

Rv1960c|M.tuberculosis_H37Rv      HYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSG
Mb1995c|M.bovis_AF2122/97         HYSAFIDGEIAAGRYRSASEVIRSALRLLEDRETQLRALREALEAGERSG
MAV_4555|M.avium_104              HYSAFIESEVASGRYRSASDVVRSALRLLEDRETQLRALREALEAGERSG
                                  ******:.*:*:*******:*:****************************

Rv1960c|M.tuberculosis_H37Rv      SSTPFDFDGFLGRKRADASRGR
Mb1995c|M.bovis_AF2122/97         SSTPFDFDGFLGRKRADASRGR
MAV_4555|M.avium_104              TSTPFDFDTFLDRKRTEASDGR
                                  :******* **.***::** **