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VRLIPSLLAMATVLGGVIGCSAHQPPTPASGCRQLDAFLKWHHGVREFLQSAIDANSRCTGTADGSARKV AIFDWDNTVVKNDIGYATNYYMLQHSLVLQPANQDWHAASRYLTDAAANALSVACGKVVPAGKPLPTGSN ALCANEILSLLDGETTTGQPAFVGNNVRRLAGPYAWSNALSAGYTAEELAGFADQAKKQNLAADVGATQQ VGTQQVDGYIRVYPQMKDLIGTLQAHGIDTWVVSASPEPIVKVWAGEVGLDDQHVVGVRSVADQSGKLTA HLVGCGGVRDGDDSVMTYLDGKRCWANQVIFGVTGPQAFNQLAADRRQVLAAGDSNSDATFVGDATVVSL VINRNQDDLMCRAYDGLFTRGGKWAINPMFIDPLPQHAPYVCGEAFINPDGSKQPVLRNDGTPIPDQVDS VF*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1921c | lppF | - | 100% (423) | PROBABLE CONSERVED LIPOPROTEIN LPPF |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1956c | lppF | 0.0 | 100.00% (423) | lipoprotein LppF |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3785c | - | 1e-133 | 59.60% (396) | lipoprotein LppF |
| M. marinum M | MMAR_0949 | lppF | 0.0 | 78.64% (426) | lipoprotein, LppF |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0700 | lppF | 0.0 | 78.17% (426) | lipoprotein, LppF |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Rv1921c|M.tuberculosis_H37Rv ---MVRLIPSLLAMATVLGGVIGCSAHQPPTPAS-----GCRQLDAFLKW
Mb1956c|M.bovis_AF2122/97 ---MVRLIPSLLAMATVLGGVIGCSAHQPPTPAS-----GCRQLDAFLKW
MMAR_0949|M.marinum_M MIPPTRLIVALLAVATLLGGVSGCSTDRPTSPASGDHGSGCRELDASLEW
MUL_0700|M.ulcerans_Agy99 MIPPTRLIVALLAVATLLGGVSGCSTDRPTSPASGDHGSGCRELDASLEW
MAB_3785c|M.abscessus_ATCC_199 ----MRATGWLVIVFSLVLAPVAWNAGAPAVQAAP----GCRQLDSALPW
* *: : ::: . . .: *. *: ***:**: * *
Rv1921c|M.tuberculosis_H37Rv HHGVREFLQSAIDANSRCTGTADGSARKVAIFDWDNTVVKNDIGYATNYY
Mb1956c|M.bovis_AF2122/97 HHGVREFLQSAIDANSRCTGTADGSARKVAIFDWDNTVVKNDIGYATNYY
MMAR_0949|M.marinum_M HDGVREFLQSAINANSKCTGTADGAAHKVAIFDWDNTVVKNDIGYATNYY
MUL_0700|M.ulcerans_Agy99 HDGVREFLQSAINANSKCTGTADGAAHRVAIFDWDNTVVKNDIGYATNYY
MAB_3785c|M.abscessus_ATCC_199 YGDVRQRLQAAIDANSTCTGTWKRSTKAVALFDWDNTEVKNDIADATLAW
: .**: **:**:*** **** . ::: **:****** *****. ** :
Rv1921c|M.tuberculosis_H37Rv MLQHSLVLQPANQDWHAASRYLTDAAANALSVACGKVVPAGKPLPTGSNA
Mb1956c|M.bovis_AF2122/97 MLQHSLVLQPANQDWHAASRYLTDAAANALSVACGKVVPAGKPLPTGSNA
MMAR_0949|M.marinum_M MLTHDLVLQPANQDWHNTGRYLTDAAADALSAACGKDVPAGEPLPTSSNA
MUL_0700|M.ulcerans_Agy99 MLTHDLVLQPANQDWHNTGRYLTDAAADALSAACGKDAPAGEPLPTSSNA
MAB_3785c|M.abscessus_ATCC_199 MLRHDKVLQPA--DWHATSRHITEAAAAALRTACGTDTPAGRPLLTSANA
** *. ***** *** :.*::*:*** ** .***. .***.** *.:**
Rv1921c|M.tuberculosis_H37Rv LCANEILSLLDGETTTGQPAFVGNNVRRLAGPYAWSNALSAGYTAEELAG
Mb1956c|M.bovis_AF2122/97 LCANEILSLLDGETTTGQPAFVGNNVRRLAGPYAWSNALSAGYTAEELAG
MMAR_0949|M.marinum_M LCADEILSLLGGQTTTGRPAFAGSDARRLEGSYAWGNALSAGYSAEELAQ
MUL_0700|M.ulcerans_Agy99 LCADEILSLLGGQTTTGRPAFAGSDARRLEGSYAWGNALSAGYTAEELAQ
MAB_3785c|M.abscessus_ATCC_199 ACADEILAVREGKTHDEQEAFTGYNQRWSNGAYVWTVALTSGYTAGEVAG
**:***:: *:* : **.* : * *.*.* **::**:* *:*
Rv1921c|M.tuberculosis_H37Rv FADQAKKQNLAADVGATQQVGTQQVDGYIRVYPQMKDLIGTLQAHGIDTW
Mb1956c|M.bovis_AF2122/97 FADQAKKQNLAADVGATQQVGTQQVDGYIRVYPQMKDLIGTLQAHGIDTW
MMAR_0949|M.marinum_M FAAAAKQQNLAADVGATQKVGTEDVDGYIRVYPQIKDLIATLQAHGIDAW
MUL_0700|M.ulcerans_Agy99 FAAAAKQQNLAADVGATQKVGTEDVDGYIRVYPQIKDLIATLQAHGIDAW
MAB_3785c|M.abscessus_ATCC_199 FAQAAKRENLAAPVGATQRIGSTTVPGYVRVYPQIKDLIATLQAHGVSTW
** **::**** *****::*: * **:*****:****.******:.:*
Rv1921c|M.tuberculosis_H37Rv VVSASPEPIVKVWAGEVGLDDQHVVGVRSVADQSGKLTAHLVGCGGVRDG
Mb1956c|M.bovis_AF2122/97 VVSASPEPIVKVWAGEVGLDDQHVVGVRSVADQSGKLTAHLVGCGGVRDG
MMAR_0949|M.marinum_M VVSASPEPVIKVWAGEVGIDDQHVVGVRSVADRSGKLTAHLLGCGGVRDG
MUL_0700|M.ulcerans_Agy99 VVSASPEPVIKVWAGEVGIDDQHVVGVRSVADRSGKLTAHLLGCGGVRDG
MAB_3785c|M.abscessus_ATCC_199 VISASSEVIAKVWSPEIGIPTTQVIGVRSVYDANGRQTPHVQGCGGQPDG
*:***.* : ***: *:*: :*:***** * .*: *.*: **** **
Rv1921c|M.tuberculosis_H37Rv DDSVMTYLDGKRCWANQVIFGVTGPQAFNQLAADRRQVLAAGDSNSDATF
Mb1956c|M.bovis_AF2122/97 DDSVMTYLDGKRCWANQVIFGVTGPQAFNQLAADRRQVLAAGDSNSDATF
MMAR_0949|M.marinum_M EDSVMPFADGKRCWANQVIFGVDGPQAFDQLPQDRRQVLAAGDSNSDATF
MUL_0700|M.ulcerans_Agy99 EDSVMPFADGKRCWANQVIFGVDGPQAFDQLPQDRRQVLAAGDSNSDATF
MAB_3785c|M.abscessus_ATCC_199 ADTVITYVDGKRCWANQVVFGVQGPAAFEPYDVNKRQILAAGDSTTDVTF
*:*:.: **********:*** ** **: ::**:******.:*.**
Rv1921c|M.tuberculosis_H37Rv VGDATVVSLVINRNQDDLMCRAYDGLFTRGGKWAINPMFIDPLPQ-HAPY
Mb1956c|M.bovis_AF2122/97 VGDATVVSLVINRNQDDLMCRAYDGLFTRGGKWAINPMFIDPLPQ-HAPY
MMAR_0949|M.marinum_M VGDATAVSLAINRNKAELMCRAYDGLYAKGGKWAVNPMFMDPLPQ-HPPY
MUL_0700|M.ulcerans_Agy99 VGDATAVSLAINRNKAELMCRAYDGLYAKGGKWAVNPMFMDPLPQ-HPPY
MAB_3785c|M.abscessus_ATCC_199 VDDATAAHLVINRNKTELMCRAYD---NADGKWLITPMFIDPDPQRMDPY
*.***.. *.****: :******* .*** :.***:** ** **
Rv1921c|M.tuberculosis_H37Rv VCG-EAFINPDGSKQPVLRNDGTPIPDQVDSVF----
Mb1956c|M.bovis_AF2122/97 VCG-EAFINPDGSKQPVLRNDGTPIPDQVDSVF----
MMAR_0949|M.marinum_M PCG-QAFVNSDGSKGPVRDAAGNPIADQVDSIF----
MUL_0700|M.ulcerans_Agy99 PRG-QAFVNSDGSKGPVRDAAGNPIADQVDSIF----
MAB_3785c|M.abscessus_ATCC_199 PCATDGRTNPDGSTGPLLRSDGSVVPDQKDTVFSTGM
. :. *.***. *: *. :.** *::*