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QPDAYPVRVRGDLDPALSRWQWLVKWFLAIPHYIVLFFLHVAAVVVTVIAFFAILFTGRYPRTLFDFNVG VMRWRWRVAFYALSALGTDRYPPFSLQTKAEYPADLEVDYPERLSRGLVLIKWWLLAIPHYLILAVFLSS GWRVFLIDPHDRVGIMWPSLLVILLLVAVVALLFTGRYPIGLYNL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1888c | - | - | 100% (186) | POSSIBLE TRANSMEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1920c | - | 1e-109 | 100.00% (186) | transmembrane protein |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2780 | - | 1e-84 | 76.22% (185) | hypothetical protein MMAR_2780 |
| M. avium 104 | MAV_4428 | - | 5e-40 | 49.44% (178) | hypothetical protein MAV_4428 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2967 | - | 8e-84 | 75.68% (185) | hypothetical protein MUL_2967 |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Rv1888c|M.tuberculosis_H37Rv -MQPDAYPVRVRGDLDPALSRWQWLVKW-FLAIPHYIVLFFLHVAAVVVT
Mb1920c|M.bovis_AF2122/97 -MQPDAYPVRVRGDLDPALSRWQWLVKW-FLAIPHYIVLFFLHVAAVVVT
MMAR_2780|M.marinum_M MTQPTAYPVRVRGDIDPALSRWQWLIKW-ILAIPHYIVLVFLYLGAFVAT
MUL_2967|M.ulcerans_Agy99 MTQPTAYPVRVRGDIDPALSRWQWLIKW-ILAIPHYIVLVFLYLGAFVAT
MAV_4428|M.avium_104 ----------MRGDFD-APSRWLWLVKWCVLAVPHYPILIGLYLVYPLCT
:***:* * *** **:** .**:*** :*. *:: : *
Rv1888c|M.tuberculosis_H37Rv VIAFFAILFTGRYPRTLFDFNVGVMRWRWRVAFYALSALGTDRYPPFSLQ
Mb1920c|M.bovis_AF2122/97 VIAFFAILFTGRYPRTLFDFNVGVMRWRWRVAFYALSALGTDRYPPFSLQ
MMAR_2780|M.marinum_M VIAFFAILLTGRYPRPLFDFNVGVMRWRWRVAFYALTVLGTDRYPPFSLR
MUL_2967|M.ulcerans_Agy99 VIAFFAILLTGRYPRPLFDFNVGVMRWRWRVAFYALTVLGTDRYPPFSLR
MAV_4428|M.avium_104 VVAGIAIICTGRYPRRLFDFNVGVLRWSWRLMNYRFPMNSTDRYPPFTLA
*:* :**: ****** ********:** **: * :. .*******:*
Rv1888c|M.tuberculosis_H37Rv TKAEYPADLEVDYPERLSRGLVLIKWWLLAIPHYLILAVFLSSGWRVFLI
Mb1920c|M.bovis_AF2122/97 TKAEYPADLEVDYPERLSRGLVLIKWWLLAIPHYLILAVFLSSGWRVFLI
MMAR_2780|M.marinum_M ENPQYPADLDVEYPQRLHRGLVLIKWWLLAIPHYLILAAFFSGGWRVVML
MUL_2967|M.ulcerans_Agy99 ENPQYPADLDVEYPQRLHRGLVLIKWWLLAIPHYLILAAFFSGGWRVVML
MAV_4428|M.avium_104 TSPDYPGDLAVDYPRRLKRLAVPVK-WLLAIPHVLVCWSMEP--------
..:**.** *:**.** * * :* ******* *: : .
Rv1888c|M.tuberculosis_H37Rv DPHDRVGIMWPSLLVILLLVAVVALLFTGRYPIGLYNL------------
Mb1920c|M.bovis_AF2122/97 DPHDRVGIMWPSLLVILLLVAVVALLFTGRYPIGLYNLVIGVNRWALRVR
MMAR_2780|M.marinum_M GRHELGGVMLPSLVVIVVVSAAIALLFTGRYPDGLYNLLIGVNRWSLRVQ
MUL_2967|M.ulcerans_Agy99 GRHELGGVMLPSLVVIVVVSAAIALLFTGRYSDGLYNLLIGVNRWSLRVH
MAV_4428|M.avium_104 ------------LLQVLCLTAALTLLCTGTVPPGMFDLLMGVVRWRYRVA
*: :: : *.::** ** . *:::*
Rv1888c|M.tuberculosis_H37Rv -----------------------------------------
Mb1920c|M.bovis_AF2122/97 AYTTLMRDEYPPLRLDMGPREQVSQPATAASDYSAGGAESP
MMAR_2780|M.marinum_M AYAGLMRDEYPPFRLDMGPREPFD-----------------
MUL_2967|M.ulcerans_Agy99 AYAGLMRDEYPPFRLDMGPREPFE-----------------
MAV_4428|M.avium_104 VYVSLMRDEYPPFRMDLGSR---------------------