For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVDDRQGRRGGRRPRSAAADNRPAFRDGPAIPPGIHARQLAPEIRRELSTLDRATADAVACHLVAAGELI DDDPEAALRHARAARVRASRIAAVREAVGIAAYRCGDWAQALAELRAARRMGSKSPLLALIADCERGLGR PQRAIELARGSEAVELSGDAADELRIVAAGARADLGQLEQALTVLSTPQLDPGRTGSTAARLFYAYAEIL LALGRGDEALQWFLRSAAADIDGVTDAEDRVDELGAREQK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1691 | - | - | 100% (250) | hypothetical protein Rv1691 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1717 | - | 1e-138 | 100.00% (250) | hypothetical protein Mb1717 |
M. gilvum PYR-GCK | Mflv_3512 | - | 5e-95 | 66.79% (274) | hypothetical protein Mflv_3512 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2356 | - | 9e-91 | 70.20% (245) | hypothetical protein MAB_2356 |
M. marinum M | MMAR_2496 | - | 1e-105 | 81.51% (238) | hypothetical protein MMAR_2496 |
M. avium 104 | MAV_3080 | - | 1e-100 | 87.62% (210) | TPR repeat-containing protein |
M. smegmatis MC2 155 | MSMEG_3754 | - | 1e-88 | 70.76% (236) | TPR repeat-containing protein |
M. thermoresistible (build 8) | TH_1552 | - | 9e-84 | 79.19% (197) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_1680 | - | 1e-105 | 81.09% (238) | hypothetical protein MUL_1680 |
M. vanbaalenii PYR-1 | Mvan_3293 | - | 1e-95 | 77.16% (232) | hypothetical protein Mvan_3293 |
CLUSTAL 2.0.9 multiple sequence alignment Rv1691|M.tuberculosis_H37Rv ------------------------------------------------MV Mb1717|M.bovis_AF2122/97 ------------------------------------------------MV MMAR_2496|M.marinum_M ------------------------------------------------MV MUL_1680|M.ulcerans_Agy99 ------------------------------------------------MV MAV_3080|M.avium_104 -------------------------------------------------- Mflv_3512|M.gilvum_PYR-GCK MRLFPR-----------AIHVMLLTNCINCES-------VDGGRILSFVP Mvan_3293|M.vanbaalenii_PYR-1 ------------------------------MA-------PDLARILSVVP TH_1552|M.thermoresistible__bu -------------------------------------------------- MSMEG_3754|M.smegmatis_MC2_155 MILFSAGPFSVSNSVRNPVRKMAEKACDYGWSGTGQYPFGDSAGRKAHVV MAB_2356|M.abscessus_ATCC_1997 ---------------------MGQDASQRGPRQQGPRRQGPGRPARDAGA Rv1691|M.tuberculosis_H37Rv DDRQGRRGGRRPRSAAADN-----------------------------RP Mb1717|M.bovis_AF2122/97 DDRQGRRGGRRPRSAAADN-----------------------------RP MMAR_2496|M.marinum_M DDRHGRGGQRRLRSASGDAPRRGPR----------RDRDGSWSGPGRARP MUL_1680|M.ulcerans_Agy99 DDRHGRGGQRRLRSASGDAPRRGPR----------RDRDGSWSGPGRARP MAV_3080|M.avium_104 -------------------------------------------------- Mflv_3512|M.gilvum_PYR-GCK HDNQGGRGERRPDRATT---GGSQR------PRRDNRSAPRTSGPNRARS Mvan_3293|M.vanbaalenii_PYR-1 QDNQGGRGDRRPSRSSN---GNRER------PRRDQRSAPRSSGPNRARP TH_1552|M.thermoresistible__bu -------------------------------------------------- MSMEG_3754|M.smegmatis_MC2_155 GDSQGGE-ERRPRRAASNRASNNQRGNRSFDPRSRDRRPPRSSGPGRARP MAB_2356|M.abscessus_ATCC_1997 RRDDRGSGAARPRRSDERPQRSDER---------------GGDRPQRNQS Rv1691|M.tuberculosis_H37Rv AFR------------DGPAIPPGIHARQLAPEIRRELSTLDRATADAVAC Mb1717|M.bovis_AF2122/97 AFR------------DGPAIPPGIHARQLAPEIRRELSTLDRATADAVAC MMAR_2496|M.marinum_M AQPQNASGDGTRARPEGPAVPPGVDAKQLAPEIRRELSTLDRATADAVAR MUL_1680|M.ulcerans_Agy99 AQPQNASGDGTRARPEGPAVPPGVDAKQLAPEIRRELSTLDRATADAVAR MAV_3080|M.avium_104 -----------------------MEAKQLAPDIRRELSTLDRATADAVAR Mflv_3512|M.gilvum_PYR-GCK AQPRPDRVDPRF--ADAPPIPAEIEAKQLAPEIRGELTTLDRATADAVAR Mvan_3293|M.vanbaalenii_PYR-1 AQPRTDGDESR---PSGPPIPAEIEAKQLAPEIRGELTTLDRSTADTVAR TH_1552|M.thermoresistible__bu ------------------------------------LATLDRVTADAVAR MSMEG_3754|M.smegmatis_MC2_155 AQP--ESAEDSQ--DSAPRLSADIEARQLAPEVRRELVTLDKATADYVAR MAB_2356|M.abscessus_ATCC_1997 PRPRRTEDRPAP-RNFGPHIPDEVEAKQLAPDVRAELRTLDKNTAETVAR * ***: **: ** Rv1691|M.tuberculosis_H37Rv HLVAAGELIDDDPEAALRHARAARVRASRIAAVREAVGIAAYRCGDWAQA Mb1717|M.bovis_AF2122/97 HLVAAGELIDDDPEAALRHARAARVRASRIAAVREAVGIAAYRCGDWAQA MMAR_2496|M.marinum_M HLVAAGELLDEDPQAALAHARAARARSSRIAVVREAVGIAAYHCGDWGQA MUL_1680|M.ulcerans_Agy99 HLVAAGELLDEDPQAALAHARAARARSSRIAVVREAVGIAAYHCGDWGQA MAV_3080|M.avium_104 HLVAAGELLDEDPEAALRHARAARARSSRIAAIREAVGIAAYHCGDWAQA Mflv_3512|M.gilvum_PYR-GCK HLVAAGELLEDDPQAALAHAQAARARSGRIAAVREAVGIAAYQCGDWAQA Mvan_3293|M.vanbaalenii_PYR-1 HLVAAGELLDDDPEAALAHARAARARSGRIAAVREAVGIAAYQCGDWAQA TH_1552|M.thermoresistible__bu RLVAAGELLDEDPETALAHARAARARSGRIAAVREAVGIAAYHCGDWAQA MSMEG_3754|M.smegmatis_MC2_155 HLVAAGNLLDEDPETALAHARAARGRAARIAAVREAVGIAAYHCGDWAQA MAB_2356|M.abscessus_ATCC_1997 HLVTAGNLLDEDPQAALEHAKAAKSRAARIAAVREAVGIAAYHCGDWAQA :**:**:*:::**::** **:**: *:.***.:*********:****.** Rv1691|M.tuberculosis_H37Rv LAELRAARRMGSKSPLLALIADCERGLGRPQRAIELARGSEAVELSGDAA Mb1717|M.bovis_AF2122/97 LAELRAARRMGSKSPLLALIADCERGLGRPQRAIELARGSEAVELSGDAA MMAR_2496|M.marinum_M LAELRAARRMGSKSALLALMADCERGLGRPQRAIDLARGPEATQLSGDDA MUL_1680|M.ulcerans_Agy99 LAELRAARRMGSKSALLALMADCERGLGRPQRAIDLARGPEATQLSGDDA MAV_3080|M.avium_104 LAELRAARRMGSKSALLALIADCERGLGRPERAIELARGPEAAELSGDDA Mflv_3512|M.gilvum_PYR-GCK LAELRAARRMGSRSPLLALIADCERGVGRPERAIELARGEEAAALTGEDA Mvan_3293|M.vanbaalenii_PYR-1 LAELRAARRMGSRSPLLALIADCERGVGRPERAIELARSPEAAELTGDDA TH_1552|M.thermoresistible__bu LSEFRAARRMGSKSPLLPLIADCERGVGRPERAIELARSPEAAELTGDDA MSMEG_3754|M.smegmatis_MC2_155 LAELRAARRMGSKSPLLPMIADCERGVGRPERAVELARSPEAEALTGEDA MAB_2356|M.abscessus_ATCC_1997 LSELRAARRMGSKSPLLALIADCERGVGRPERAIELARGDEAKALTGDAA *:*:********:*.**.::******:***:**::***. ** *:*: * Rv1691|M.tuberculosis_H37Rv DELRIVAAGARADLGQLEQALTVLSTPQLDPGRTGSTAARLFYAYAEILL Mb1717|M.bovis_AF2122/97 DELRIVAAGARADLGQLEQALTVLSTPQLDPGRTGSTAARLFYAYAEILL MMAR_2496|M.marinum_M DELRIVAAGARADLGQLEQALTLLSTPQLDPDRTGSTAARLFYAYADTLL MUL_1680|M.ulcerans_Agy99 DELRIVAAGALADLGQLEQALTLLSTPQLDPDRTGSTAARLFYAYADTLL MAV_3080|M.avium_104 DELRIVAAGARADLGQLEQALTILSTPQLDSTRTGSTAARLFYAYADTLL Mflv_3512|M.gilvum_PYR-GCK DELRIVVAGARSDLGQHEQALAILSTPTLDPSKSGQTAARLFYAYADTLV Mvan_3293|M.vanbaalenii_PYR-1 DELRMVVAGARSDLGQHEQALAVLSSPALDPTRTGPTAARLFYAYAETLL TH_1552|M.thermoresistible__bu DELRIVVAGARSDLGQHEQALAVLASPPLDPKRTGTTAARLFYAYADTLL MSMEG_3754|M.smegmatis_MC2_155 DELRIVVAGARADLGQFEQALTLLSTPPLDPTSRGQTAARLFYVYADLLL MAB_2356|M.abscessus_ATCC_1997 DELRIVVAGARADMGQLDQALAVLSTPAPDPSRVGEIAARLFYAYADILL ****:*.*** :*:** :***::*::* *. * ******.**: *: Rv1691|M.tuberculosis_H37Rv ALGRGDEALQWFLRSAAADIDGVTDAEDRVDELGAREQK Mb1717|M.bovis_AF2122/97 ALGRGDEALQWFLRSAAADIDGVTDAEDRVDELGAREQK MMAR_2496|M.marinum_M ALGRRDEALHWFLRSAAADSEGVTDAEDRVDELAE---- MUL_1680|M.ulcerans_Agy99 ALGRRDEALHWFLRSAAADSEGVTDAEDRVDELAE---- MAV_3080|M.avium_104 ALGRNDEALQWFLHAAAADLDGVTDAEDRVSELA----- Mflv_3512|M.gilvum_PYR-GCK ALDRRDEALQWFLHAAKADVDGITDAEERITELS----- Mvan_3293|M.vanbaalenii_PYR-1 ALGREAEALQWFLHAAAADVEGVTDAEERVTELS----- TH_1552|M.thermoresistible__bu KLGRRDEALQWFLHAAAADVAGATDAEDRVTELS----- MSMEG_3754|M.smegmatis_MC2_155 AVERTDEALQWFIHAAEADVEGVTDAEERITELS----- MAB_2356|M.abscessus_ATCC_1997 ALDRKAEAVQWFLHAADADVEGHTDAEDRAAELA----- : * **::**:::* ** * ****:* **.