For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MIYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHASTNLHNLAHGHLGTLWNSAFVIDEGP LYFWLPCLACLLAVAELQLRSLRLTVAFVVGHIGATLLVAAVLAGAIEIGWLPWSISRVSDVGMSYGALA ALGALTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHTVALLLGMLVTACFTRPARWTLGRCALLAV ASGFCLVLLAHSWWSLVSGSALGLLGALGAAGFARWTRARATSLPPGALAIPQPALSR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1648 | - | - | 100% (268) | Probable transmembrane protein |
M. tuberculosis H37Rv | Rv3434c | - | 2e-11 | 31.28% (179) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1675 | - | 1e-155 | 100.00% (268) | transmembrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2331 | - | 2e-58 | 48.08% (260) | hypothetical protein MAB_2331 |
M. marinum M | MMAR_2455 | - | 1e-104 | 73.90% (249) | transmembrane protein |
M. avium 104 | MAV_3121 | - | 5e-88 | 58.94% (263) | hypothetical protein MAV_3121 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1634 | - | 1e-104 | 73.02% (252) | transmembrane protein |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv1648|M.tuberculosis_H37Rv ------MIYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHA Mb1675|M.bovis_AF2122/97 ------MIYRVACLLARIRFTVGYVAALASVSTTILMHGPQVHAQVIRHA MMAR_2455|M.marinum_M MTYAIQWIFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHA MUL_1634|M.ulcerans_Agy99 MTYAIQWIFAIVCRLARVRFTVSYLAALASVSIAMLMLGPQAHERVIRHA MAV_3121|M.avium_104 -----------MSRLARVQFTVGYAALLLAISCAILVLGPQAHDVIVQRA MAB_2331|M.abscessus_ATCC_1997 -------MRRVWAALVRLRVTIGYAVALVAVAVVLVIEGPRMQDRVVAHA . *.*::.*:.* . * ::: .::: **: : :: :* Rv1648|M.tuberculosis_H37Rv STNLHNLAHGHLGTLWNSAFVIDEGPLYFWLPCLACLLAVAELQLRSLRL Mb1675|M.bovis_AF2122/97 STNLHNLAHGHLGTLWNSAFVIDEGPLYFWLPCLACLLAVAELQLRSLRL MMAR_2455|M.marinum_M STNLHNLAHGRLATLWNSAFVIDEGPLYFWLPCLACLLALAELHLRTARL MUL_1634|M.ulcerans_Agy99 STNLHNLAHGRLATLWNSAFVIDEGPLYFWLPCLACLLALAELHLRTARL MAV_3121|M.avium_104 STNLHNLSHGHLGTLLGSALVVDAGPLYFWLPFLTCLLALAELHLRTIRL MAB_2331|M.abscessus_ATCC_1997 STNLHNLHQGHLGTLIGSAFVTDAGPIYLWLPGLMSILALAELQWRSGRL ******* :*:*.** .**:* * **:*:*** * .:**:***: *: ** Rv1648|M.tuberculosis_H37Rv TVAFVVGHIGATLLVAAVLAGAIEIGWLPWSISRVSDVGMSYGALAALGA Mb1675|M.bovis_AF2122/97 TVAFVVGHIGATLLVAAVLAGAIEIGWLPWSISRVSDVGMSYGALAALGA MMAR_2455|M.marinum_M TVAFFVGHLGATLLVAATLAGAVEFGWLPVSIAHVSDVGMSYGALAVLGA MUL_1634|M.ulcerans_Agy99 TVAFFVGHLGATLLVAATLAGAVEFGWLPVSIAHVSDVGMSYGALAVLGA MAV_3121|M.avium_104 VVAFLVGHIGATLLVAAALAASVEFGWLPVSITRASDVGMSYGALAVLGA MAB_2331|M.abscessus_ATCC_1997 ALTFVLGHIGATLIVGLGLAFAVWLHWAPVSIARASDVGMSYGTAAVLGA .::*.:**:****:*. ** :: : * * **::.********: *.*** Rv1648|M.tuberculosis_H37Rv LTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHTVALLLGMLVTACF Mb1675|M.bovis_AF2122/97 LTAAIPGRWRPAWIGWWVSLGLATATIGGGFTDAGHTVALLLGMLVTACF MMAR_2455|M.marinum_M LTAAISRRWRPAWIGWWVALGLAAAVAGGDFTDSGHAVSLLLGMLVTARF MUL_1634|M.ulcerans_Agy99 LTAAISRRWRPAWIGWWVALGLAAAIAGGDFTDSGHAVSLLLGMLVTARF MAV_3121|M.avium_104 MTAVIPARWRAAWVGWWVAAGIASAIVGGDFTDAGHTVAVILGVLVSARF MAB_2331|M.abscessus_ATCC_1997 LTFSIPPRWRTSWGWGWITIGLVAIVCNQTFTEVGHLTALLLGMLG-ARL :* *. ***.:* *:: *:.: . **: ** .:::**:* * : Rv1648|M.tuberculosis_H37Rv T--RPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAAG Mb1675|M.bovis_AF2122/97 T--RPARWTLGRCALLAVASGFCLVLLAHSWWSLVSGSALGLLGALGAAG MMAR_2455|M.marinum_M R--HPIRWTPARYALLMVSSGFGFLLLAHTRWTSASGVALGAVGALVAYG MUL_1634|M.ulcerans_Agy99 R--HPIRWTPARYALLMVSSGFGFLLLAHTRWTSANGVALGAVGALVACG MAV_3121|M.avium_104 R--QPIHWTPARYLMLAASSGFGFLMLAHHWGTMAATPVFGLLGAAVAYA MAB_2331|M.abscessus_ATCC_1997 TPSYAPHWSALRLSLLACGCLFALMLFSEDGQTLAVALPAGLAAVLITHW . :*: * :* .. * :::::. : . * .. : Rv1648|M.tuberculosis_H37Rv FARWTRARATSLPPG----ALAIPQPALSR Mb1675|M.bovis_AF2122/97 FARWTRARATSLPPG----ALAIPQPALSR MMAR_2455|M.marinum_M LARWTTMRVAPA------------------ MUL_1634|M.ulcerans_Agy99 LARWTTMRVASA------------------ MAV_3121|M.avium_104 AAKAYTGRGLAVTPLDGDDPLTGPQPAVAG MAB_2331|M.abscessus_ATCC_1997 VSERRRPHGQVAIA---------------- :. :