For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVDPTATDSPKVSIVSISYNQEEYIREALDGFAAQRTEFPVEVIIADDASTDATPRIIGEYAARYPQLFR PILRQTNIGVHANFKDVLSAARGEYLALCEGDDYWTDPLKLSKQVKYLDRHPETTVCFHPVRVIYEDGAK DSEFPPLSWRRDLSVDALLARNFIQTNSVVYRRQPSYDDIPANVMPIDWYLHVRHAVGGEIAMLPETMAV YRRHAHGIWHSAYTDRRKFWETRGHGMAATLEAMLDLVHGHREREAIVGEVSAWVLREIGKTPGRQGRAL LLKSIADHPRMTMLSLQHRWAQTPWRRFKRRLSTELSSLAALAYATRRRALEGRDGGYRETTSPPTGRGR NVRGSHA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1520 | - | - | 100% (346) | probable sugar transferase |
M. tuberculosis H37Rv | Rv1516c | - | e-113 | 63.09% (317) | sugar transferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1547 | - | 0.0 | 100.00% (346) | sugar transferase |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3255 | - | 2e-98 | 53.87% (336) | glycosyltransferase GtfTB |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3097 | - | 7e-06 | 25.84% (209) | PUTATIVE transferase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv1520|M.tuberculosis_H37Rv ---MSIVSISYNQEEYIREALDGFAAQRTEFPVEVIIADDASTDATPRII Mb1547|M.bovis_AF2122/97 ---MSIVSISYNQEEYIREALDGFAAQRTEFPVEVIIADDASTDATPRII MAV_3255|M.avium_104 ------MSTTHNQQAYVRDTLDGFLAQRVDFPMEVIVADDASTDATPRII TH_3097|M.thermoresistible__bu LTASTRLSFVIASRNRAAELASVVNRLLDTTPCPVIVVDNASDDHSVDVI :* .. : . . * **:.*:** * : :* Rv1520|M.tuberculosis_H37Rv GEYAARYPQLFRPILRQTNIGVHANFKDVLSAARGEYLALCEGDDYWTDP Mb1547|M.bovis_AF2122/97 GEYAARYPQLFRPILRQTNIGVHANFKDVLSAARGEYLALCEGDDYWTDP MAV_3255|M.avium_104 QDYADRHPNLFRPILRSRNVGLNANLTGALSAARGEYIALCEGDDYWVDP TH_3097|M.thermoresistible__bu TRIAARSANRVQVIELDSNRGAVG-RNAGVAASRTPYVAFCD-DDSWWEP * * .: .: * . * * . . ::*:* *:*:*: ** * :* Rv1520|M.tuberculosis_H37Rv LKLSKQVKYLDRHPETTVCFHPVRVIYEDGAKDSE--------------- Mb1547|M.bovis_AF2122/97 LKLSKQVKYLDRHPETTVCFHPVRVIYEDGAKDSE--------------- MAV_3255|M.avium_104 LKLTKQVALLDEDPDTTVCFHPVQVVWTHECAEDEKLVHTLYRKFEEIFL TH_3097|M.thermoresistible__bu DALALGVETFDRYP--RVGLLAART------------------------- *: * :*. * * : ..:. Rv1520|M.tuberculosis_H37Rv --FPPLSWRRDLSVDALLARNFIQTNSVVYRRQPSYDDIPANVMPIDWYL Mb1547|M.bovis_AF2122/97 --FPPLSWRRDLSVDALLARNFIQTNSVVYRRQPSYDDIPANVMPIDWYL MAV_3255|M.avium_104 PKFPPPFRAGDLSFETLISRNFIQTNSVMYRRLPRYDDIPADVMPLDWYL TH_3097|M.thermoresistible__bu ---------------TVLPGGRIDPFSIELARSP---------------- :::. . *:. *: * * Rv1520|M.tuberculosis_H37Rv HVRHAVGGEIAMLPETMAVYRRHAHGIWHSAYTDRRKFWETRGHGMAATL Mb1547|M.bovis_AF2122/97 HVRHAVGGEIAMLPETMAVYRRHAHGIWHSAYTDRRKFWETRGHGMAATL MAV_3255|M.avium_104 HVRHAAEGAIAMLPETMAVYRRHPRGMWYKSITDPATFWRMQGPGHAATL TH_3097|M.thermoresistible__bu -----------------LGHRPDLPGPSILGFMSCAAMVRTAAFQAAGGF :* . * . . : . . *. : Rv1520|M.tuberculosis_H37Rv EAMLDLVHGHREREAIVGEVSAWVLREIG-KTPGRQGRALLLKSIADHPR Mb1547|M.bovis_AF2122/97 EAMLDLVHGHREREAIVGEVSAWVLREIG-KTPGRQGRALLLKSIADHPR MAV_3255|M.avium_104 DAMLDVVSGDPVHESIVAKNADWVLGAIAKQVPDPEGQQVLTQTTAKYPR TH_3097|M.thermoresistible__bu SDILHFR-GEEQLLALDMAALGWELCYLAELLAVHQPSSVRATTXXXAPR . :*.. *. :: * * :. . : : : ** Rv1520|M.tuberculosis_H37Rv MTMLSLQHRWAQTPWRRFKRRLSTELSSLAALAYATRRRALEGRDGGYRE Mb1547|M.bovis_AF2122/97 MTMLSLQHRWAQTPWRRFKRRLSTELSSLAALAYATRRRALEGRDGGYRE MAV_3255|M.avium_104 IAALALRNRCTKTLGGRVKR-LRRKLS---------------------RN TH_3097|M.thermoresistible__bu SLWWPKRSPWRRCRRRRIR------------------------------- . : : *.: Rv1520|M.tuberculosis_H37Rv TTSPPTGRGRNVRGSHA- Mb1547|M.bovis_AF2122/97 TTSPPTGRGRNVRGSHA- MAV_3255|M.avium_104 ATAPNSDAERRIDEPLSA TH_3097|M.thermoresistible__bu ------------------