For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAWRKLGRIFAPSGELDWSRSHAALPVPEWIEGDIFRIYFSGRDGQNRSSIGSVIVDLAVGGKILDIPAE PILRPGARGMFDDCGVSIGSIVRAGDTRLLYYTGWNLAVTVPWKNTIGVAISEAGAPFERWSTFPVVALD ERDPFSLSYPWVIQDGGTYRMWYGSNLGWGEGTDEIPHVIRYAQSRDGVHWEKQDRVHIDTSGSDNSAAC RPYVVRDAGVYRMWFCARGAKYRIYCATSEDGLTWRQLGKDEGIDVSPDSWDSDMIEYPCVFDHRGQRFM LYSGDGYGRTGFGLAVLEN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1502 | - | - | 100% (299) | hypothetical protein Rv1502 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1541 | - | 1e-115 | 99.47% (189) | hypothetical protein Mb1541 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2318 | - | 1e-134 | 71.19% (302) | hypothetical protein MMAR_2318 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv1502|M.tuberculosis_H37Rv MAWRKLGRIFAPSGELDWSRSHAALPVPEWIEGDIFRIYFSGRDGQNRSS Mb1541|M.bovis_AF2122/97 -------------------------------------------------- MMAR_2318|M.marinum_M MPWRKLGRIFVPSGELDWARTHASQPVAEWVDGDIFRIYFSTRDDQNRSS Rv1502|M.tuberculosis_H37Rv IGSVIVDLAVGGKILDIPAEPILRPGARGMFDDCGVSIGSIVRAGDTRLL Mb1541|M.bovis_AF2122/97 -------------------------------------------------- MMAR_2318|M.marinum_M IGSVVVDLAAGGKVLEISPEPVLGPGALGMFDDCGVSMGSIVPVGDTRFL Rv1502|M.tuberculosis_H37Rv YYTGWNLAVTVPWKNTIGVAISEAGAPFERWSTFPVVALDERDPFSLSYP Mb1541|M.bovis_AF2122/97 ----------MPWKNTIGVAISEAGAPFERWSTFPVVALDERDPFSLSYP MMAR_2318|M.marinum_M YYMGWNLAVTVPWKNAIGLAISQAGGPFKRWSTFPVVPLDEGDPYSISYP :****:**:***:**.**:********.*** **:*:*** Rv1502|M.tuberculosis_H37Rv WVIQDGGTYRMWYGSNLGWGEGT---DEIPHVIRYAQSRDGVHWEKQDRV Mb1541|M.bovis_AF2122/97 WVIQDGGTYRMWYGSNLGWGEGT---DEIPHVIRYAQSRDGVHWEKQDRV MMAR_2318|M.marinum_M WVIRDDDKYRMWYGSNVRWEQKTKNMDGLPHVIKSAESIDAIHWEKQELV ***:*...********: * : * * :****: *:* *.:*****: * Rv1502|M.tuberculosis_H37Rv HIDTSGSDNSAACRPYVVRDAGVYRMWFCARGAKYRIYCATSEDGLTWRQ Mb1541|M.bovis_AF2122/97 HIDTSGSDNSAACRPCVVRDAGVYRMWFCARGAKYRIYCATSEDGLTWRQ MMAR_2318|M.marinum_M AIDTAGCDDIAAARPCVVRDPGLYRMWYCARGAQYSIYHAVSEDGVIWTQ ***:*.*: **.** ****.*:****:*****:* ** *.****: * * Rv1502|M.tuberculosis_H37Rv LGKDEGIDVSPDSWDSDMIEYPCVFDHRGQRFMLYSGDGYGRTGFGLAVL Mb1541|M.bovis_AF2122/97 LGKDEGIDVSPDSWDSDMIEYPCVFDHRGQRFMLYSGDGYGRTGFGLAVL MMAR_2318|M.marinum_M LGKDNGIDASPGEWDANSVGYPCVFDHKGQRFLIYSGDGYGRTGFGLAVL ****:***.**..**:: : *******:****::**************** Rv1502|M.tuberculosis_H37Rv EN Mb1541|M.bovis_AF2122/97 EN MMAR_2318|M.marinum_M DD ::