For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTAAPNDWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGVVFQTADQVAMGALGLVLAGAVLLF ARPRLRVGSAGLSVRNLLGDRIVGWSEVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTV RSLLARYRPDLCAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1417 | - | - | 100% (154) | POSSIBLE CONSERVED MEMBRANE PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1452 | - | 2e-84 | 100.00% (154) | hypothetical protein Mb1452 |
M. gilvum PYR-GCK | Mflv_3717 | - | 2e-51 | 65.52% (145) | hypothetical protein Mflv_3717 |
M. leprae Br4923 | MLBr_00561 | - | 1e-58 | 75.52% (143) | hypothetical protein MLBr_00561 |
M. abscessus ATCC 19977 | MAB_2794c | - | 3e-49 | 59.31% (145) | hypothetical protein MAB_2794c |
M. marinum M | MMAR_2224 | - | 2e-65 | 77.70% (148) | hypothetical protein MMAR_2224 |
M. avium 104 | MAV_3363 | - | 3e-62 | 77.55% (147) | hypothetical protein MAV_3363 |
M. smegmatis MC2 155 | MSMEG_3074 | - | 1e-53 | 64.00% (150) | hypothetical protein MSMEG_3074 |
M. thermoresistible (build 8) | TH_1013 | - | 4e-42 | 56.74% (141) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_1811 | - | 6e-65 | 77.03% (148) | hypothetical protein MUL_1811 |
M. vanbaalenii PYR-1 | Mvan_2696 | - | 1e-49 | 66.21% (145) | hypothetical protein Mvan_2696 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3717|M.gilvum_PYR-GCK ------MSG-DWDLEVKPHLTPIFAWGAAVIIVVAHVAVGALLKVGSSGV Mvan_2696|M.vanbaalenii_PYR-1 ------MSGNDWDIEVRPHLTPYFAYGAAALIVAAHVIVGALLKVGSSGV Rv1417|M.tuberculosis_H37Rv --MTAAPN--DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGV Mb1452|M.bovis_AF2122/97 --MTAAPN--DWDVVLRPHWTPLFAYAAAFLIAVAHVAGGLLLKVGSSGV MMAR_2224|M.marinum_M --MTDEAQRAEWDVVLRPYWTPVVAYTAAILIVAAHVAGGLFLKVGSSGM MUL_1811|M.ulcerans_Agy99 --MTDEAQRAEWNVVLRPYWTPVVAYTAAILIVAAHVAGGLFLKVGSSGM MLBr_00561|M.leprae_Br4923 --MTAQLDRDDWDVELRPYWTPLFAYAAAFLIAAAHITVGLLLRIKSSGV MAV_3363|M.avium_104 --MTPPEP-ERWDVVLRPHRTPLFVYGAAVLIAAAHIVLGLLLKVGSTGV MAB_2794c|M.abscessus_ATCC_199 --MRRVAE-AEWDVVLKPHLSPYFVYGAALVIAAAHIAVGFLLKISPSGV MSMEG_3074|M.smegmatis_MC2_155 MTMASQMADETWDVQIRPYRTPIFAYGAALIIFAAHVVVGALLKVGSTGV TH_1013|M.thermoresistible__bu ------MTKARWDIEVRPRMTPRFAYVAAAIMVAVNVVLAILLPVKPTGV *:: ::* :* ..: ** :: ..:: . :* : .:*: Mflv_3717|M.gilvum_PYR-GCK VFRTADQVAIALVGVVIACFVTLFARPRLRVGPSGVAVRNLFGYRLFPWT Mvan_2696|M.vanbaalenii_PYR-1 VFRTWDQVAIAMVGVVIACFVSLFARPRLRVGPSGVAVRNLFGYRLFPWD Rv1417|M.tuberculosis_H37Rv VFQTADQVAMGALGLVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWS Mb1452|M.bovis_AF2122/97 VFQTADQVAMGALGLVLAGAVLLFARPRLRVGSAGLSVRNLLGDRIVGWS MMAR_2224|M.marinum_M IFQTGDQVAMGALGLILAGAVLLFTRPRLRIGAAGISVRNLLGYKLIPWK MUL_1811|M.ulcerans_Agy99 IFQTGDQVAMGALGLILAGAVLLFTRPRLRIGAAGISVRNLLGYKLIPWK MLBr_00561|M.leprae_Br4923 VFRTADQVAIGALGLVIASAVLLLTRPRLRVGAAGLLVRNIMFYRIIPWS MAV_3363|M.avium_104 VFRTSDQVAIAVLGLVIAGVVLLFARPRLRIGPAGVSVRNLLGDKLIEWP MAB_2794c|M.abscessus_ATCC_199 IFKTSDQVGIALVGIVIACVVLMFARPRVRAGSAGIEVRNVLGPKLIPWS MSMEG_3074|M.smegmatis_MC2_155 VFRTEDQVAIALLGAVIACAVLMFARPRLRIGPSGMAVRNILGYKLIPWS TH_1013|M.thermoresistible__bu IYRTADQVAFVLLGLVLGGAILLFTRPRLRVGPPGVAVRNLFGYRVLPWS :::* ***.: :* ::. : :::***:* *..*: ***:: ::. * Mflv_3717|M.gilvum_PYR-GCK EVVDVSFHEGARWARLDLPDDEYVPVMAIQAVDKGRAVESMDTVRALITR Mvan_2696|M.vanbaalenii_PYR-1 QVIDVSFHKGACWARLDLPDDEYVPVMAIQAVDKRRAVEAMDRVRALLRR Rv1417|M.tuberculosis_H37Rv EVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRSLLAR Mb1452|M.bovis_AF2122/97 EVIGVSFPGGSRWARIDLADDEYIPVMAIQAVDKDRAVAAMDTVRSLLAR MMAR_2224|M.marinum_M DVVGVSFPGGSRWARIDLPDDEYIPVMAIQAVDKERAVASMDAVRSLLTQ MUL_1811|M.ulcerans_Agy99 DVVGVSFPGGSRWARIDLPDDEYIPVMAIQAVDKERAVASMDAVRSLLTQ MLBr_00561|M.leprae_Br4923 HVVDVSFPLGSHWARIDLPDDEYIPLMAIQAVDKERAVEAMDAVRALLAR MAV_3363|M.avium_104 DVVGVSFPVGHRWARIDLPDDEYIPVMAIQAVDKGRAVDAMDTVRSLLAR MAB_2794c|M.abscessus_ATCC_199 EVVGVSFPPGAQWARLDLEDFEYEPMMAIQAIDKQRAVDAMDALREVLGK MSMEG_3074|M.smegmatis_MC2_155 DVVGLSFPVGARWARIDLPDDEYVAVMAIQAIDRDRAVESMDRARELVAR TH_1013|M.thermoresistible__bu EVIDVSLHPGARWARVDLPDDEYVPAMAIQLVDKEHAADAMERVRERVAY .*:.:*: * ***:** * ** . **** :*: :*. :*: * : Mflv_3717|M.gilvum_PYR-GCK YLDDVNSQERPRRP Mvan_2696|M.vanbaalenii_PYR-1 YQADATSP-RP--- Rv1417|M.tuberculosis_H37Rv YRPDLCAR------ Mb1452|M.bovis_AF2122/97 YRPDLCAR------ MMAR_2224|M.marinum_M YRPDLPTR------ MUL_1811|M.ulcerans_Agy99 YRPDLPTR------ MLBr_00561|M.leprae_Br4923 YRAGPYGP------ MAV_3363|M.avium_104 YRPDLQG------- MAB_2794c|M.abscessus_ATCC_199 YRG----------- MSMEG_3074|M.smegmatis_MC2_155 YRPDLAA------- TH_1013|M.thermoresistible__bu YKAQHQSKTRSAN- *