For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRRKVRRLTLAVSALVALFPAVAGCSDSGDNKPGATIPSTPANAEGRHGPFFPQCGGVSDQTVTELTRVT GLVNTAKNSVGCQWLAGGGILGPHFSFSWYRGSPIGRERKTEELSRASVEDINIDGHSGFIAIGNEPSLG DSLCEVGIQFSDDFIEWSVSFSQKPFPLPCDIAKELTRQSIANSK
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1274 | lprB | - | 100% (185) | POSSIBLE LIPOPROTEIN LPRB |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1305 | lprB | 1e-106 | 99.46% (185) | putative lipoprotein LPRB |
| M. gilvum PYR-GCK | Mflv_2252 | - | 2e-64 | 63.44% (186) | putative lipoprotein LprB |
| M. leprae Br4923 | MLBr_01115 | - | 8e-86 | 78.72% (188) | putative lipoprotein |
| M. abscessus ATCC 19977 | MAB_1416 | - | 3e-48 | 52.81% (178) | putative lipoprotein LprB precursor |
| M. marinum M | MMAR_4146 | lprB | 2e-93 | 84.86% (185) | lipoprotein LprB |
| M. avium 104 | MAV_1423 | - | 1e-85 | 83.63% (171) | LprB protein |
| M. smegmatis MC2 155 | MSMEG_5007 | - | 4e-68 | 69.66% (178) | LprB protein |
| M. thermoresistible (build 8) | TH_1849 | lprB | 3e-56 | 59.41% (170) | POSSIBLE LIPOPROTEIN LPRB |
| M. ulcerans Agy99 | MUL_4009 | lprB | 1e-93 | 84.86% (185) | lipoprotein LprB |
| M. vanbaalenii PYR-1 | Mvan_4439 | - | 4e-67 | 64.17% (187) | putative lipoprotein LprB |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2252|M.gilvum_PYR-GCK MHGVTPSYRGHRRPVKALAVVAA------ALMPVLAACSDSEPQG-PSVP
Mvan_4439|M.vanbaalenii_PYR-1 MHGVTPSFRGHRRPVKALAVAAA------AMIPVLGACSDSEPTG-PVVP
TH_1849|M.thermoresistible__bu -------------------VLAA------AAVSVLAACDSSEPSSSPEAQ
MSMEG_5007|M.smegmatis_MC2_155 -----------------MAVLAA------AMVPVFAACSTDEPAS-PEVP
Rv1274|M.tuberculosis_H37Rv ----------MRRKVRRLTLAVS---ALVALFPAVAGCSDSGDNK-PGAT
Mb1305|M.bovis_AF2122/97 ----------MRRKVRRLTLAVS---ALVALFPAVAGCSDSGDNK-PGAT
MMAR_4146|M.marinum_M ----------MRRNLTTLALAAA---ALMALSPAVAGCSNSGDNN-PGAT
MUL_4009|M.ulcerans_Agy99 ----------MRRNLTTLALAAA---ALMALSPAVAGCSNSGDNN-PGAT
MLBr_01115|M.leprae_Br4923 ----------MRCDVRALALAARGLIELMIVIPMVAGCSNAGSNK-SVGT
MAV_1423|M.avium_104 ---------------------------MTILIPATAACSDSGGSK-PGAT
MAB_1416|M.abscessus_ATCC_1997 ----------MRLGLGSRNVWSKCAVALVMVALVLTGCSGGDKSDQPNGT
.*. .
Mflv_2252|M.gilvum_PYR-GCK TSEEP-QQNVA----HGPFFPQCGGLSDEEVGRLTEVPGLVNTAKTSVGC
Mvan_4439|M.vanbaalenii_PYR-1 STEAP-QQSVS----HGPFFPECGGISDETIAQLTEVPGLVNTAKTSVGC
TH_1849|M.thermoresistible__bu QPGDG-GGEVT----HGPFFPQCGGISDETIMEVTQISGLVNTATTSVGC
MSMEG_5007|M.smegmatis_MC2_155 QSESPSAGAPT----HGPFFPQCGGISDQTVSELTQVPGLVNTATNSSGC
Rv1274|M.tuberculosis_H37Rv IPSTPANAEGR----HGPFFPQCGGVSDQTVTELTRVTGLVNTAKNSVGC
Mb1305|M.bovis_AF2122/97 IPSTPANAEGR----HGPFFPQCGGVSDQTVTELTRVTGLVNTAKNSVGC
MMAR_4146|M.marinum_M ASSTPGSSEGR----HGPFFPQCGGVSDQTVTQLTRISGLINTAQNSVGC
MUL_4009|M.ulcerans_Agy99 ASSTPGSSEGR----HGPFFPQCGGVSDQTVTQLTRISGLINTAQNSVGC
MLBr_01115|M.leprae_Br4923 ISSTPGNTEGH----HGPMFPRCGGISDQTMSQLTKVTGLTNTARNSVGC
MAV_1423|M.avium_104 TSSAPQNGQGN----HGPMFPQCGGISDQTVAELTKVSGLINTARNSVGC
MAB_1416|M.abscessus_ATCC_1997 ASNATAPQQTKSKGVDGPMFTECGGVSDQAMMQMTKVVGLVGTAKNSVGC
. .**:*..***:**: : .:*.: ** .** .* **
Mflv_2252|M.gilvum_PYR-GCK QWLSGGSILGPHFSFSWFRGSPIGRERKTMELSRTSVEDLSIEGHDGFIG
Mvan_4439|M.vanbaalenii_PYR-1 QWLSGGSILGPHFSFSWFRGSPIGRERKTMELSRTSVEDINIEGHDGFIG
TH_1849|M.thermoresistible__bu QWLVNGGIMGPHFSFTHFRGSPIGRERKTMELSRTSVEDITIEGHEGFIG
MSMEG_5007|M.smegmatis_MC2_155 QWLQGGSILGPHFSFTWFRGSPIGRERKTEELSRASVEDINIEGHGGFIA
Rv1274|M.tuberculosis_H37Rv QWLAGGGILGPHFSFSWYRGSPIGRERKTEELSRASVEDINIDGHSGFIA
Mb1305|M.bovis_AF2122/97 QWLAGGGILGPHFSFSWYRGSPIGRERKTEELSRASVEDINIDGHSGFIA
MMAR_4146|M.marinum_M QWLAGGGIMGPHFSFSWYRGSPIGRERKTEELSRASVEDINIDGHSGFIA
MUL_4009|M.ulcerans_Agy99 QWLAGGGIMGPHFSFSWYRGSPIGRERKTEELSRASVEDINIDGHSGFIA
MLBr_01115|M.leprae_Br4923 QWLAGGGIVGPHFSFSWYRGSPIGRERKTEELSRASVDDININGHSGFIA
MAV_1423|M.avium_104 QWLAGGGILGPHFSFSWYRGSPIGRERKTEELSRASVDDININGHSGFIA
MAB_1416|M.abscessus_ATCC_1997 VWLRGGSIVGPHFSFNWYRGSPIGRERATEERTRPSVEDIEIAGYKGFIA
** .*.*:******. :********* * * :*.**:*: * *: ***.
Mflv_2252|M.gilvum_PYR-GCK INEDPDPKIG-INLCEVGIQFGDDFIEWSVSYAQPP-YPNACDVAKELTR
Mvan_4439|M.vanbaalenii_PYR-1 INEDPDPKIG-VNLCEVGIQFNDDFIEWSISYAQPP-FPDACEVAKELTR
TH_1849|M.thermoresistible__bu INES--PLLGTVNLCEVGIQFDDDFIEWSVSYVNRP-PTDPCEVAKELAR
MSMEG_5007|M.smegmatis_MC2_155 VGEDP-LKPGDVTLCEIGIQFDDDFIEWSVSYSQKP-FPDPCEVAKELTR
Rv1274|M.tuberculosis_H37Rv IGNE--PSLG-DSLCEVGIQFSDDFIEWSVSFSQKP-FPLPCDIAKELTR
Mb1305|M.bovis_AF2122/97 IGNE--PSLG-DSLCEVGIQFSDDFIEWSVSFSQKP-FPPPCDIAKELTR
MMAR_4146|M.marinum_M IGNE--PTLG-DSLCEVGIQFQDDFIEWSVSFNQKP-FPPPCDVARELTR
MUL_4009|M.ulcerans_Agy99 IGNE--PTLG-DSLCEVGIQFQDDFIEWSVSFNQKP-FPPPCDVARELTR
MLBr_01115|M.leprae_Br4923 VGNE--PSLG-DSLCEVGIQFQDDFIEWSVSFSQKP-FPSPCGIAKELTR
MAV_1423|M.avium_104 VGNE--PNLG-DSLCEVGIQFSDDFIEWSISFSQKP-FPPPCDIAKELAR
MAB_1416|M.abscessus_ATCC_1997 TNGY--PGTV-TTLCEIGMDFGNDFIEWSINFEPGSGAPDSCDVAKQLTE
. .***:*::* :******:.: . . .* :*::*:.
Mflv_2252|M.gilvum_PYR-GCK QSIVNSK-
Mvan_4439|M.vanbaalenii_PYR-1 QSIVNSK-
TH_1849|M.thermoresistible__bu QSIVNAQ-
MSMEG_5007|M.smegmatis_MC2_155 QSIVNSK-
Rv1274|M.tuberculosis_H37Rv QSIANSK-
Mb1305|M.bovis_AF2122/97 QSIANSK-
MMAR_4146|M.marinum_M QSIANSK-
MUL_4009|M.ulcerans_Agy99 QSIANSK-
MLBr_01115|M.leprae_Br4923 QSIANSK-
MAV_1423|M.avium_104 QSIANSK-
MAB_1416|M.abscessus_ATCC_1997 TSIKAAKK
** ::